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The map label for this gene is 220903444

Identifier: 220903444

GI number: 220903444

Start: 197234

End: 197788

Strand: Reverse

Name: 220903444

Synonym: Ddes_0158

Alternate gene names: NA

Gene position: 197788-197234 (Counterclockwise)

Preceding gene: 220903445

Following gene: 220903442

Centisome position: 6.88

GC content: 58.92

Gene sequence:

>555_bases
ATGGCACAAGATTATTTCCGCGCACTCAGAGATGTGGCGCTGGTCATCAACTCCAGCCTTGAACCCAAGGACGTCCTGCA
CAAAATCACGGAACAGACCGCGTCCACCATGGGCTGCAAGGCCAGCACCATCCGCCTGCTGGACACCACGGGCCGCTTTC
TGCTGCCCAGCGCCGCCCACGGCCTTTCAGCCACCTACCTGCGCAAAGGCCCGGTAGAAGTAAAACGCAGCGGCATGGAC
GGTGAAGTCCTGGCCGGCAAAACCATCCACCTCAAGGATGCCGCCGCCGACGGCCGCTTTCAGTATCCTGAATCAGCCAA
GACCGAAGGACTGGTTTCCGTTCTTTCGGCTCCCCTCATGGTGGACGGCAAGGCCATCGGCCTCATTCGCGTGTATTCCG
CCGAAGAACGCGAATTTACGCCCGACGAACAGACCTTTATGGAAGCCGTGGCCGCCATTTCTGCGCTTGCCATTGAAAAC
GCCCGCCTGCATGAGGCGCTGCGCAACAATTACGAACTGATGAGCAAGCACGCCTACTCGGTATACGAAGACTAG

Upstream 100 bases:

>100_bases
CTGAATCGAGAATATTTCAACACCGATACGGTTACAGGGCTGTGGCAGTCATGCCGCCTCAGCCGGATTCTTTTGCACCG
CTTTCTTCAAGGAGGCACAC

Downstream 100 bases:

>100_bases
CACACGGGCATAAACGGGCTATTCCGCGCGGCTGCGCGGTTCCTCTGCCCGGTCCATAGGGGCTACGCCCTGCGCCTCAA
GAACCGCCCCATTGGCCGTC

Product: putative phytochrome sensor protein

Products: NA

Alternate protein names: Phytochrome Sensor Protein; Multi-Sensor Signal Transduction Histidine Kinase; GAF Domain Protein; PAS Sensor Protein; GAF Domain-Containing Protein; GGDEF Domain Family Protein

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MAQDYFRALRDVALVINSSLEPKDVLHKITEQTASTMGCKASTIRLLDTTGRFLLPSAAHGLSATYLRKGPVEVKRSGMD
GEVLAGKTIHLKDAAADGRFQYPESAKTEGLVSVLSAPLMVDGKAIGLIRVYSAEEREFTPDEQTFMEAVAAISALAIEN
ARLHEALRNNYELMSKHAYSVYED

Sequences:

>Translated_184_residues
MAQDYFRALRDVALVINSSLEPKDVLHKITEQTASTMGCKASTIRLLDTTGRFLLPSAAHGLSATYLRKGPVEVKRSGMD
GEVLAGKTIHLKDAAADGRFQYPESAKTEGLVSVLSAPLMVDGKAIGLIRVYSAEEREFTPDEQTFMEAVAAISALAIEN
ARLHEALRNNYELMSKHAYSVYED
>Mature_183_residues
AQDYFRALRDVALVINSSLEPKDVLHKITEQTASTMGCKASTIRLLDTTGRFLLPSAAHGLSATYLRKGPVEVKRSGMDG
EVLAGKTIHLKDAAADGRFQYPESAKTEGLVSVLSAPLMVDGKAIGLIRVYSAEEREFTPDEQTFMEAVAAISALAIENA
RLHEALRNNYELMSKHAYSVYED

Specific function: Unknown

COG id: COG3605

COG function: function code T; Signal transduction protein containing GAF and PtsI domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20134; Mature: 20003

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQDYFRALRDVALVINSSLEPKDVLHKITEQTASTMGCKASTIRLLDTTGRFLLPSAAH
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCEECCCCCC
GLSATYLRKGPVEVKRSGMDGEVLAGKTIHLKDAAADGRFQYPESAKTEGLVSVLSAPLM
CCCHHHHHCCCHHHHHCCCCCCEECCCEEEEECCCCCCCEECCCCCCHHHHHHHHHCCCE
VDGKAIGLIRVYSAEEREFTPDEQTFMEAVAAISALAIENARLHEALRNNYELMSKHAYS
ECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VYED
HCCC
>Mature Secondary Structure 
AQDYFRALRDVALVINSSLEPKDVLHKITEQTASTMGCKASTIRLLDTTGRFLLPSAAH
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCEECCCCCC
GLSATYLRKGPVEVKRSGMDGEVLAGKTIHLKDAAADGRFQYPESAKTEGLVSVLSAPLM
CCCHHHHHCCCHHHHHCCCCCCEECCCEEEEECCCCCCCEECCCCCCHHHHHHHHHCCCE
VDGKAIGLIRVYSAEEREFTPDEQTFMEAVAAISALAIENARLHEALRNNYELMSKHAYS
ECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VYED
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA