| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is thiL [H]
Identifier: 220903356
GI number: 220903356
Start: 90458
End: 91528
Strand: Reverse
Name: thiL [H]
Synonym: Ddes_0070
Alternate gene names: 220903356
Gene position: 91528-90458 (Counterclockwise)
Preceding gene: 220903357
Following gene: 220903355
Centisome position: 3.19
GC content: 65.83
Gene sequence:
>1071_bases ATGGTCCCGTCCCCTGTTCCGGGCGGCTCTGCCGCCACCAGCGCGGTCCCACTTTCAGAAGATCGCATCCTGGCCTGCCT GGCGGGATACTTTCCGCAGACGCACCCTTCCCTGCTGCTTGGCCGTGGCGATGACTGCGCTGTGCTCAAGGCGGAAAAGC CCCTTTGCGTGAGCAGCGACCTTTTTCTGGAAGACATCCACTTCCGGCGAAACTACTTTACCCCCGAAGACACGGGCTAC AAGGCGCTGGCCGTCAACGTGAGCGATCTTGCGGGCTGCGGCGCCCGCCCCCTGGCCTTTACCCTCTGCCTGGGCTTGCC CGCATGGGTGGACATGGACTGGCTCAACAGGTTTTTCAGCGGCATGGCCGAACTGGCGGGCAAGCACCGCATCGCCCTGG CTGGCGGCGACCTGTCCCGCAGCACAAGCCTGCACATCTCCATCACTGTCTGGGGCGAAGCGGCGGAACCCGGCAGTTTT CTGGCGCGCGGAGGCAGCATGCCGGGCGACATTCTTTTTCTTGTGGGGCCGCTGGGTCTTGCCCGCGCAGGCCTTGCCCT GCTTGAGGAGCAGGGCCGCGAAGCCCTGCACCACTGGCCCGCCGTCTGCGCCGCGCATCTGCGCCCCGTTCCCCAGGTGG ATGCGGGACTCATGCTGTCCAGAGCAGGGTACAATGCCCGGCCCCCGGCCCTTATGGACCTTTCGGACGGGATACTGCGC GACCTGCCCCGCCTGCTGGGCCTCAGCGGCGAACTGAGCGCCACCTGCCCGGAGAAATGCACGGGCCTTGGAGCCGAAAT CGTGCTGCCGCGAGGCCGCCTGCACCCGGAAGTACTGCACTACGCGGCGGCTACGGGTAAAAATCCTGTTTATGAGGCCC TGCTCGGCGGCGAGGATTACGCCCTGCTCGGCTCATGCGCCCCCGACATGCTGCCGCCCCTGCATGCGGCCATACCGGGG CTGTTCAGCATCGGCGTCGTCACCTCCGGCGGCGGCATTGTATGCAATAACGAACCGCTGGAAAAACTCGGCGGCGGTTT TGACCACTTTGATGCCGGGCAGGACGCCTGA
Upstream 100 bases:
>100_bases AAAATAATCAGGCACATCTCGCCCGAAAAGGTGCAGGTGAATTTTCCCGGTTTTGGACTCAAGATCATTCTGAGCGAATA TCTGCTCATGGAGAACTGAT
Downstream 100 bases:
>100_bases CATGCGCGCCCATATCGGCGTTGTTACCTGGAACCGGCTGGACCTTACCCGCCGGTGCCTCACAAGCCTGCTTGCGCAGA CGCCGCCCGGCTACAGCCTT
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MVPSPVPGGSAATSAVPLSEDRILACLAGYFPQTHPSLLLGRGDDCAVLKAEKPLCVSSDLFLEDIHFRRNYFTPEDTGY KALAVNVSDLAGCGARPLAFTLCLGLPAWVDMDWLNRFFSGMAELAGKHRIALAGGDLSRSTSLHISITVWGEAAEPGSF LARGGSMPGDILFLVGPLGLARAGLALLEEQGREALHHWPAVCAAHLRPVPQVDAGLMLSRAGYNARPPALMDLSDGILR DLPRLLGLSGELSATCPEKCTGLGAEIVLPRGRLHPEVLHYAAATGKNPVYEALLGGEDYALLGSCAPDMLPPLHAAIPG LFSIGVVTSGGGIVCNNEPLEKLGGGFDHFDAGQDA
Sequences:
>Translated_356_residues MVPSPVPGGSAATSAVPLSEDRILACLAGYFPQTHPSLLLGRGDDCAVLKAEKPLCVSSDLFLEDIHFRRNYFTPEDTGY KALAVNVSDLAGCGARPLAFTLCLGLPAWVDMDWLNRFFSGMAELAGKHRIALAGGDLSRSTSLHISITVWGEAAEPGSF LARGGSMPGDILFLVGPLGLARAGLALLEEQGREALHHWPAVCAAHLRPVPQVDAGLMLSRAGYNARPPALMDLSDGILR DLPRLLGLSGELSATCPEKCTGLGAEIVLPRGRLHPEVLHYAAATGKNPVYEALLGGEDYALLGSCAPDMLPPLHAAIPG LFSIGVVTSGGGIVCNNEPLEKLGGGFDHFDAGQDA >Mature_356_residues MVPSPVPGGSAATSAVPLSEDRILACLAGYFPQTHPSLLLGRGDDCAVLKAEKPLCVSSDLFLEDIHFRRNYFTPEDTGY KALAVNVSDLAGCGARPLAFTLCLGLPAWVDMDWLNRFFSGMAELAGKHRIALAGGDLSRSTSLHISITVWGEAAEPGSF LARGGSMPGDILFLVGPLGLARAGLALLEEQGREALHHWPAVCAAHLRPVPQVDAGLMLSRAGYNARPPALMDLSDGILR DLPRLLGLSGELSATCPEKCTGLGAEIVLPRGRLHPEVLHYAAATGKNPVYEALLGGEDYALLGSCAPDMLPPLHAAIPG LFSIGVVTSGGGIVCNNEPLEKLGGGFDHFDAGQDA
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=348, Percent_Identity=32.7586206896552, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 37271; Mature: 37271
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPSPVPGGSAATSAVPLSEDRILACLAGYFPQTHPSLLLGRGDDCAVLKAEKPLCVSSD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCEEECCC LFLEDIHFRRNYFTPEDTGYKALAVNVSDLAGCGARPLAFTLCLGLPAWVDMDWLNRFFS HHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHCCCHHCCHHHHHHHHH GMAELAGKHRIALAGGDLSRSTSLHISITVWGEAAEPGSFLARGGSMPGDILFLVGPLGL HHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEECCHHH ARAGLALLEEQGREALHHWPAVCAAHLRPVPQVDAGLMLSRAGYNARPPALMDLSDGILR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEECCCHHHHH DLPRLLGLSGELSATCPEKCTGLGAEIVLPRGRLHPEVLHYAAATGKNPVYEALLGGEDY HHHHHHCCCCCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCE ALLGSCAPDMLPPLHAAIPGLFSIGVVTSGGGIVCNNEPLEKLGGGFDHFDAGQDA EEECCCCCHHCCHHHHHHCCHHEEEEEECCCCEEECCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MVPSPVPGGSAATSAVPLSEDRILACLAGYFPQTHPSLLLGRGDDCAVLKAEKPLCVSSD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCEEECCC LFLEDIHFRRNYFTPEDTGYKALAVNVSDLAGCGARPLAFTLCLGLPAWVDMDWLNRFFS HHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHCCCHHCCHHHHHHHHH GMAELAGKHRIALAGGDLSRSTSLHISITVWGEAAEPGSFLARGGSMPGDILFLVGPLGL HHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCEEEEECCHHH ARAGLALLEEQGREALHHWPAVCAAHLRPVPQVDAGLMLSRAGYNARPPALMDLSDGILR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEECCCHHHHH DLPRLLGLSGELSATCPEKCTGLGAEIVLPRGRLHPEVLHYAAATGKNPVYEALLGGEDY HHHHHHCCCCCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCE ALLGSCAPDMLPPLHAAIPGLFSIGVVTSGGGIVCNNEPLEKLGGGFDHFDAGQDA EEECCCCCHHCCHHHHHHCCHHEEEEEECCCCEEECCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]