| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903299
Identifier: 220903299
GI number: 220903299
Start: 18207
End: 19082
Strand: Direct
Name: 220903299
Synonym: Ddes_0013
Alternate gene names: NA
Gene position: 18207-19082 (Clockwise)
Preceding gene: 220903298
Following gene: 220903300
Centisome position: 0.63
GC content: 60.16
Gene sequence:
>876_bases ATGAAGCTGCGTAAATCCCCCTTCTCGCTGCCGCCCGAACAATATGGAGGCGCACGCAAGCGCATCTTTATCGGACTCAT GCTGGCGTCCTGTCTGGTGGTCTGTCTTGGGCTGGCTGTTTTTCTCATCCTGCCCTGGTCCGACCTGCTGGACGGCATGG TCTGGCTTGAGCGCCTCAGCATTACTGTGGGCCTTGTGAGTATAGGGGGGCTCATGTGGCTGTGCCTCATGCTGGTGTTT CACATCTATACCGGCAAAGCCCTGCCCGGCGCGCGCAGTGTGCGCCATATCACCATCCGTCTGTTTTTTCCGCTTATGGA GCTGCTGGCGAAATTTGTGGGCATAGAACGCGGCAAGGTGCGCCGCAGTTTCATCAAGGTCAACAACGAGCTGGTACTTT CCTGCCGCAGGGCGGTGCAGCCCGGAGAACTGCTTTTGCTGCTGCCCCATTGTGTGCAGCGTTCGTCATGCCCGCACCGC CTGGTGCACAATGCCGACCTGTGCCGTCGTTGCGGGCAGTGCCCTGTGGGGGATCTGCTGCACCTGCGTGACAGGTACGG CATACGGCTTGCCATAGCCACCGGCGGAACCATCGCACGTCGCATCGTGGTGCAGACCAGACCGCGCTGCATCATTGCCG TGGCCTGCGAGCGCGATCTTACCTCGGGCATACAGGACAGCTATCCCTTGCCGGTTTTTGGCGTGCTGAACATGCGGCCC AACGGTCCCTGTCTGGATACCCTTGTTCCGCTGGCGGCTCTCGAGGATGCCGTGCGGCTGTTTCTTGGGCTTGAACATAT GGCGGCACACGGACAGGCAGGCGAAAAATGCCCGTCTGTCGATGCGGTAATACCTGATGGAGAGGGCCGAGCATGA
Upstream 100 bases:
>100_bases TGACCCTTGTGAGGCGTAAAAAAAGCCATATGCCCATTTTTATTCAATCCGGGCCTTTTTATCGGCCTTTTTCATGCCCG CTATGCTCCCCCGAGGTTTC
Downstream 100 bases:
>100_bases GCAGGAACAGGAACATATCGTTGCGTAAGCTGTCGTGTAACGGCCGCACGGCTGCCCTGCGGGCGCTGTTGCTGGTTGAT GACGGGCTGAGCGCCCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKLRKSPFSLPPEQYGGARKRIFIGLMLASCLVVCLGLAVFLILPWSDLLDGMVWLERLSITVGLVSIGGLMWLCLMLVF HIYTGKALPGARSVRHITIRLFFPLMELLAKFVGIERGKVRRSFIKVNNELVLSCRRAVQPGELLLLLPHCVQRSSCPHR LVHNADLCRRCGQCPVGDLLHLRDRYGIRLAIATGGTIARRIVVQTRPRCIIAVACERDLTSGIQDSYPLPVFGVLNMRP NGPCLDTLVPLAALEDAVRLFLGLEHMAAHGQAGEKCPSVDAVIPDGEGRA
Sequences:
>Translated_291_residues MKLRKSPFSLPPEQYGGARKRIFIGLMLASCLVVCLGLAVFLILPWSDLLDGMVWLERLSITVGLVSIGGLMWLCLMLVF HIYTGKALPGARSVRHITIRLFFPLMELLAKFVGIERGKVRRSFIKVNNELVLSCRRAVQPGELLLLLPHCVQRSSCPHR LVHNADLCRRCGQCPVGDLLHLRDRYGIRLAIATGGTIARRIVVQTRPRCIIAVACERDLTSGIQDSYPLPVFGVLNMRP NGPCLDTLVPLAALEDAVRLFLGLEHMAAHGQAGEKCPSVDAVIPDGEGRA >Mature_291_residues MKLRKSPFSLPPEQYGGARKRIFIGLMLASCLVVCLGLAVFLILPWSDLLDGMVWLERLSITVGLVSIGGLMWLCLMLVF HIYTGKALPGARSVRHITIRLFFPLMELLAKFVGIERGKVRRSFIKVNNELVLSCRRAVQPGELLLLLPHCVQRSSCPHR LVHNADLCRRCGQCPVGDLLHLRDRYGIRLAIATGGTIARRIVVQTRPRCIIAVACERDLTSGIQDSYPLPVFGVLNMRP NGPCLDTLVPLAALEDAVRLFLGLEHMAAHGQAGEKCPSVDAVIPDGEGRA
Specific function: Unknown
COG id: COG1852
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002829 - InterPro: IPR017446 [H]
Pfam domain/function: PF01976 DUF116 [H]
EC number: NA
Molecular weight: Translated: 32058; Mature: 32058
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRKSPFSLPPEQYGGARKRIFIGLMLASCLVVCLGLAVFLILPWSDLLDGMVWLERLS CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ITVGLVSIGGLMWLCLMLVFHIYTGKALPGARSVRHITIRLFFPLMELLAKFVGIERGKV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH RRSFIKVNNELVLSCRRAVQPGELLLLLPHCVQRSSCPHRLVHNADLCRRCGQCPVGDLL HHHHHHHCHHHHHHHHHCCCCCCEEEECHHHHCCCCCCHHHHCCHHHHHHCCCCCHHHHH HLRDRYGIRLAIATGGTIARRIVVQTRPRCIIAVACERDLTSGIQDSYPLPVFGVLNMRP HHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCEEEEEECCC NGPCLDTLVPLAALEDAVRLFLGLEHMAAHGQAGEKCPSVDAVIPDGEGRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure MKLRKSPFSLPPEQYGGARKRIFIGLMLASCLVVCLGLAVFLILPWSDLLDGMVWLERLS CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ITVGLVSIGGLMWLCLMLVFHIYTGKALPGARSVRHITIRLFFPLMELLAKFVGIERGKV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH RRSFIKVNNELVLSCRRAVQPGELLLLLPHCVQRSSCPHRLVHNADLCRRCGQCPVGDLL HHHHHHHCHHHHHHHHHCCCCCCEEEECHHHHCCCCCCHHHHCCHHHHHHCCCCCHHHHH HLRDRYGIRLAIATGGTIARRIVVQTRPRCIIAVACERDLTSGIQDSYPLPVFGVLNMRP HHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCEEEEEECCC NGPCLDTLVPLAALEDAVRLFLGLEHMAAHGQAGEKCPSVDAVIPDGEGRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]