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The map label for this gene is 218884718

Identifier: 218884718

GI number: 218884718

Start: 1308379

End: 1308753

Strand: Reverse

Name: 218884718

Synonym: DKAM_1407

Alternate gene names: NA

Gene position: 1308753-1308379 (Counterclockwise)

Preceding gene: 218884719

Following gene: 218884717

Centisome position: 95.86

GC content: 42.4

Gene sequence:

>375_bases
TTGTCGAATACCATAGTATTAAAAGCAATAGAGGAGAAACAGTTGTCAAATAGTGAGGCATACCTGATTCTCAGAAATAT
AGTGGAGAAGATAAAGGAGGAAACCGGAACAGTACCCCTTCTGCTTTCAAGGGTCTTAGAATACCTTAAAACCCATCATA
AAATACCCCCGGAGAAAGCAGGGGAACTCCACGAGCTACTAGCTTCTAAAGGCTTGAAAGATGAAACCATTGTAATGTTA
ATGAATATCTGTCCCTCCTCGATAGATGAGTTAAGATACCTTATGGAGCTCGAAGAGAAGACTCCAGAGCAAGGCGTCTT
AGAAGAGATACTGGCCACCCTAAGCAATTATTGCACCGGTGTAGCCCCTTCCTAA

Upstream 100 bases:

>100_bases
CCAGAGCACATGAGACCCTTAAACATCCCTCAGGCACAGCAAGCCTGACCCGTAAACATTAATATTCCTAGTGCTTATAA
CTATATGGTGGTGACCAGTA

Downstream 100 bases:

>100_bases
TCCTCACCTACATCAAACCTGCTTAAAGGGGATTGTATTGTCACACCGTGATCACAATTTTAGATATAAGAGGCATGGGG
AGAGACGCTGGGATGAAAGG

Product: RNA polymerase Rpb4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSNTIVLKAIEEKQLSNSEAYLILRNIVEKIKEETGTVPLLLSRVLEYLKTHHKIPPEKAGELHELLASKGLKDETIVML
MNICPSSIDELRYLMELEEKTPEQGVLEEILATLSNYCTGVAPS

Sequences:

>Translated_124_residues
MSNTIVLKAIEEKQLSNSEAYLILRNIVEKIKEETGTVPLLLSRVLEYLKTHHKIPPEKAGELHELLASKGLKDETIVML
MNICPSSIDELRYLMELEEKTPEQGVLEEILATLSNYCTGVAPS
>Mature_123_residues
SNTIVLKAIEEKQLSNSEAYLILRNIVEKIKEETGTVPLLLSRVLEYLKTHHKIPPEKAGELHELLASKGLKDETIVMLM
NICPSSIDELRYLMELEEKTPEQGVLEEILATLSNYCTGVAPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13920; Mature: 13789

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTIVLKAIEEKQLSNSEAYLILRNIVEKIKEETGTVPLLLSRVLEYLKTHHKIPPEKA
CCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHH
GELHELLASKGLKDETIVMLMNICPSSIDELRYLMELEEKTPEQGVLEEILATLSNYCTG
HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
VAPS
CCCC
>Mature Secondary Structure 
SNTIVLKAIEEKQLSNSEAYLILRNIVEKIKEETGTVPLLLSRVLEYLKTHHKIPPEKA
CCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHH
GELHELLASKGLKDETIVMLMNICPSSIDELRYLMELEEKTPEQGVLEEILATLSNYCTG
HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
VAPS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA