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The map label for this gene is 218884717

Identifier: 218884717

GI number: 218884717

Start: 1307691

End: 1308341

Strand: Reverse

Name: 218884717

Synonym: DKAM_1406

Alternate gene names: NA

Gene position: 1308341-1307691 (Counterclockwise)

Preceding gene: 218884718

Following gene: 218884716

Centisome position: 95.83

GC content: 43.78

Gene sequence:

>651_bases
TTGTCACACCGTGATCACAATTTTAGATATAAGAGGCATGGGGAGAGACGCTGGGATGAAAGGCATGAGCCGGCGCTCTA
TGTTCTAGATTACCTTGAGCTTGGAAACCCCTCTGATCCCCATTATGAACACAGGAACCAGCCTTTCATCCAGGGTATCG
GGGTGAAATACTTCTCTCTACTCGAAGCAACACCCTTACCCGCGGTTAAAATAGAGATACTCGAGAAAATAGACCTTGGA
TACCCGAGTAAGGTTAAGAGAATCATACATATAGTATACAGTGAGCTCACTAGTGTTGCTAAAACCAATCTACCCGAGGC
TCTTAAAAACATAGTACTTGAGAACGAGAAGATATTCGTTGAGTTCTTCAATATAGCTGAGCCGGTCAACATAAGGCTAC
ACGCACTTGAATTACTCCCCGAGATAGGTAAGAAGACAATGAACCAGATACTCGAGGAGAGAAGCAAGAAGAGGTTTGAG
AGCTTCGAGGACATAAAGAAGAGGACCCGTATAGATCCTGTTAAAGCCCTTGTAAACAGGGTTATCAAGGAGTTGATTGG
TGGGGAGAAGTACTATTTATTCATAAAATCCCCCGAGCCTAACACGCTGTACCTAGGGTACTTGGAGAAATTATATGGGG
AGCTATATTAG

Upstream 100 bases:

>100_bases
GGCGTCTTAGAAGAGATACTGGCCACCCTAAGCAATTATTGCACCGGTGTAGCCCCTTCCTAATCCTCACCTACATCAAA
CCTGCTTAAAGGGGATTGTA

Downstream 100 bases:

>100_bases
GCCAGATGAAATGAGTAGACGCGGCCTCCTTTCATGGACTATAAGCATACTCCGCGAGCATGGTTTAAGACCCAGGAGGA
AGCTTAGTCAGAACTTCATC

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSHRDHNFRYKRHGERRWDERHEPALYVLDYLELGNPSDPHYEHRNQPFIQGIGVKYFSLLEATPLPAVKIEILEKIDLG
YPSKVKRIIHIVYSELTSVAKTNLPEALKNIVLENEKIFVEFFNIAEPVNIRLHALELLPEIGKKTMNQILEERSKKRFE
SFEDIKKRTRIDPVKALVNRVIKELIGGEKYYLFIKSPEPNTLYLGYLEKLYGELY

Sequences:

>Translated_216_residues
MSHRDHNFRYKRHGERRWDERHEPALYVLDYLELGNPSDPHYEHRNQPFIQGIGVKYFSLLEATPLPAVKIEILEKIDLG
YPSKVKRIIHIVYSELTSVAKTNLPEALKNIVLENEKIFVEFFNIAEPVNIRLHALELLPEIGKKTMNQILEERSKKRFE
SFEDIKKRTRIDPVKALVNRVIKELIGGEKYYLFIKSPEPNTLYLGYLEKLYGELY
>Mature_215_residues
SHRDHNFRYKRHGERRWDERHEPALYVLDYLELGNPSDPHYEHRNQPFIQGIGVKYFSLLEATPLPAVKIEILEKIDLGY
PSKVKRIIHIVYSELTSVAKTNLPEALKNIVLENEKIFVEFFNIAEPVNIRLHALELLPEIGKKTMNQILEERSKKRFES
FEDIKKRTRIDPVKALVNRVIKELIGGEKYYLFIKSPEPNTLYLGYLEKLYGELY

Specific function: Unknown

COG id: COG1491

COG function: function code J; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007003
- InterPro:   IPR012340 [H]

Pfam domain/function: PF04919 DUF655 [H]

EC number: NA

Molecular weight: Translated: 25507; Mature: 25376

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRDHNFRYKRHGERRWDERHEPALYVLDYLELGNPSDPHYEHRNQPFIQGIGVKYFSL
CCCCCCCCHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
LEATPLPAVKIEILEKIDLGYPSKVKRIIHIVYSELTSVAKTNLPEALKNIVLENEKIFV
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEE
EFFNIAEPVNIRLHALELLPEIGKKTMNQILEERSKKRFESFEDIKKRTRIDPVKALVNR
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VIKELIGGEKYYLFIKSPEPNTLYLGYLEKLYGELY
HHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure 
SHRDHNFRYKRHGERRWDERHEPALYVLDYLELGNPSDPHYEHRNQPFIQGIGVKYFSL
CCCCCCCHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
LEATPLPAVKIEILEKIDLGYPSKVKRIIHIVYSELTSVAKTNLPEALKNIVLENEKIFV
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEE
EFFNIAEPVNIRLHALELLPEIGKKTMNQILEERSKKRFESFEDIKKRTRIDPVKALVNR
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VIKELIGGEKYYLFIKSPEPNTLYLGYLEKLYGELY
HHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]