| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884537
Identifier: 218884537
GI number: 218884537
Start: 1146927
End: 1147334
Strand: Reverse
Name: 218884537
Synonym: DKAM_1226
Alternate gene names: NA
Gene position: 1147334-1146927 (Counterclockwise)
Preceding gene: 218884538
Following gene: 218884536
Centisome position: 84.04
GC content: 43.14
Gene sequence:
>408_bases ATGATAGAGGAGACAGTTAAAGTAGACTCAAAGGGCAGGATAACCATACCAATAGCTGTGAGAGAGCTCTTTGATATAAG GGAGGGAATGTACATGTTGATCATAGCTGATAAGGAATCAAGGGAGATAAAACTGGTTCCACTGCCTGTGGCAGCCAGGC TAGCTAAGCTAAAACTACTCGTCGAGGATAGGACGGGCGTCCTTGCTGAGTTAACCAGGTTTATTGCAAGCCATAACGTT GACATAGTGTCAACTAAGTGTGTCGTGTTGAAGCGCGAGGAGCTTGGGGAATGCGAGATGATTATTGATATAAGTAAAAC TGGTTGGAGCGATCCATCTATAATAATAGAGAACCTTAAGAAGCTAGAGCCGGTTAAAAACGTTGAGTTGGCACAGCTAA ACATTTAA
Upstream 100 bases:
>100_bases AGCATCATTCCGTATCTAGGACTTAAAGAGGGAAAGACATAGTTATAAGCATGTATTAGATCAAGAATATCTAGGAACTA GGTGATTTGGAATGCCGGCC
Downstream 100 bases:
>100_bases ACCTGGGCCTGCCCTAATGGTTCCCAACGTAATCAGGATAGGATGTTGCGGATTCCCGGTGTCAAGAAAAAGATACGTTA AGGAATTCAACGTGGTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MIEETVKVDSKGRITIPIAVRELFDIREGMYMLIIADKESREIKLVPLPVAARLAKLKLLVEDRTGVLAELTRFIASHNV DIVSTKCVVLKREELGECEMIIDISKTGWSDPSIIIENLKKLEPVKNVELAQLNI
Sequences:
>Translated_135_residues MIEETVKVDSKGRITIPIAVRELFDIREGMYMLIIADKESREIKLVPLPVAARLAKLKLLVEDRTGVLAELTRFIASHNV DIVSTKCVVLKREELGECEMIIDISKTGWSDPSIIIENLKKLEPVKNVELAQLNI >Mature_135_residues MIEETVKVDSKGRITIPIAVRELFDIREGMYMLIIADKESREIKLVPLPVAARLAKLKLLVEDRTGVLAELTRFIASHNV DIVSTKCVVLKREELGECEMIIDISKTGWSDPSIIIENLKKLEPVKNVELAQLNI
Specific function: Unknown
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15223; Mature: 15223
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEETVKVDSKGRITIPIAVRELFDIREGMYMLIIADKESREIKLVPLPVAARLAKLKLL CCCCCEEECCCCCEEEEHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCHHHHHHHHEEE VEDRTGVLAELTRFIASHNVDIVSTKCVVLKREELGECEMIIDISKTGWSDPSIIIENLK EECCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHH KLEPVKNVELAQLNI HCCCCCCCEEEEECC >Mature Secondary Structure MIEETVKVDSKGRITIPIAVRELFDIREGMYMLIIADKESREIKLVPLPVAARLAKLKLL CCCCCEEECCCCCEEEEHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCHHHHHHHHEEE VEDRTGVLAELTRFIASHNVDIVSTKCVVLKREELGECEMIIDISKTGWSDPSIIIENLK EECCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHH KLEPVKNVELAQLNI HCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA