Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884536

Identifier: 218884536

GI number: 218884536

Start: 1146149

End: 1146910

Strand: Reverse

Name: 218884536

Synonym: DKAM_1225

Alternate gene names: NA

Gene position: 1146910-1146149 (Counterclockwise)

Preceding gene: 218884537

Following gene: 218884534

Centisome position: 84.01

GC content: 45.14

Gene sequence:

>762_bases
ATGGTTCCCAACGTAATCAGGATAGGATGTTGCGGATTCCCGGTGTCAAGAAAAAGATACGTTAAGGAATTCAACGTGGT
TGAACTCCAGAATACTTTTTATAACCTTCCATCTAGGGAATGGTGTAGAATGCTCCATGAATCCCTTCCACAGGGCTTCG
AGATAACTATTAAGGCGTGGCAGGCTGTAACACACCCATCGACCTCGCCGACATGGAGGAGAATGAGGAGTAAGCCTAGA
GGAGAGCTCTTGAACTACGGGTACCTGAAATATACCAGGGAGAATATTGATGCCCTAACAGAGATCGTTGAAAGGGCTAG
AATACTTGGAGCTGGAATAATAGTTTTTCAGACACCCTCGAGCATGCCTTGCGACAAGGAGAGCCTTGAAAACGTTGGTC
GCTTCTTTAAAGAGGCTATTAATATTGCCGGCGAGGATGTGAAGCTTGGATGGGAACCCAGGGGAGAATGCAGCAGGCGA
AGAGAGGTTTTAGAGTTGATCAAGGAGAATGGGTTAATACATGTTGTAGACCCGTTCAAAACAATGCCGGTAAGCCTGCC
TGGTGGAGTAGCATATTTCAGGCTCCACGGGATCGGGGGAGAAGTTAACTACAGGTATAGGTATAGTGATGGAGACCTCA
TGGGGCTCTATAAGTTGATTACTAAGCTGAATCCACGCGTAGCATATGTTATGTTCAACAATATATACATGTTCGAGGAT
GCTTTAAGGTTCAAGAAACTCGTTGAATCAATGAAAACATGA

Upstream 100 bases:

>100_bases
TGGAGCGATCCATCTATAATAATAGAGAACCTTAAGAAGCTAGAGCCGGTTAAAAACGTTGAGTTGGCACAGCTAAACAT
TTAAACCTGGGCCTGCCCTA

Downstream 100 bases:

>100_bases
TGAACGCCCTATCCGGGCGACCGTTTAAACGGGATGAGCATTAACGAACCCTGTCTGATCCAGTGTACAGCTAATTGTTA
ACCATCCTTAACCATTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MVPNVIRIGCCGFPVSRKRYVKEFNVVELQNTFYNLPSREWCRMLHESLPQGFEITIKAWQAVTHPSTSPTWRRMRSKPR
GELLNYGYLKYTRENIDALTEIVERARILGAGIIVFQTPSSMPCDKESLENVGRFFKEAINIAGEDVKLGWEPRGECSRR
REVLELIKENGLIHVVDPFKTMPVSLPGGVAYFRLHGIGGEVNYRYRYSDGDLMGLYKLITKLNPRVAYVMFNNIYMFED
ALRFKKLVESMKT

Sequences:

>Translated_253_residues
MVPNVIRIGCCGFPVSRKRYVKEFNVVELQNTFYNLPSREWCRMLHESLPQGFEITIKAWQAVTHPSTSPTWRRMRSKPR
GELLNYGYLKYTRENIDALTEIVERARILGAGIIVFQTPSSMPCDKESLENVGRFFKEAINIAGEDVKLGWEPRGECSRR
REVLELIKENGLIHVVDPFKTMPVSLPGGVAYFRLHGIGGEVNYRYRYSDGDLMGLYKLITKLNPRVAYVMFNNIYMFED
ALRFKKLVESMKT
>Mature_253_residues
MVPNVIRIGCCGFPVSRKRYVKEFNVVELQNTFYNLPSREWCRMLHESLPQGFEITIKAWQAVTHPSTSPTWRRMRSKPR
GELLNYGYLKYTRENIDALTEIVERARILGAGIIVFQTPSSMPCDKESLENVGRFFKEAINIAGEDVKLGWEPRGECSRR
REVLELIKENGLIHVVDPFKTMPVSLPGGVAYFRLHGIGGEVNYRYRYSDGDLMGLYKLITKLNPRVAYVMFNNIYMFED
ALRFKKLVESMKT

Specific function: Unknown

COG id: COG1801

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29285; Mature: 29285

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPNVIRIGCCGFPVSRKRYVKEFNVVELQNTFYNLPSREWCRMLHESLPQGFEITIKAW
CCCCEEEEEECCCCHHHHHHHHHCCEEEEHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEH
QAVTHPSTSPTWRRMRSKPRGELLNYGYLKYTRENIDALTEIVERARILGAGIIVFQTPS
HHHCCCCCCHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
SMPCDKESLENVGRFFKEAINIAGEDVKLGWEPRGECSRRREVLELIKENGLIHVVDPFK
CCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCC
TMPVSLPGGVAYFRLHGIGGEVNYRYRYSDGDLMGLYKLITKLNPRVAYVMFNNIYMFED
CCCCCCCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHH
ALRFKKLVESMKT
HHHHHHHHHHHCC
>Mature Secondary Structure
MVPNVIRIGCCGFPVSRKRYVKEFNVVELQNTFYNLPSREWCRMLHESLPQGFEITIKAW
CCCCEEEEEECCCCHHHHHHHHHCCEEEEHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEH
QAVTHPSTSPTWRRMRSKPRGELLNYGYLKYTRENIDALTEIVERARILGAGIIVFQTPS
HHHCCCCCCHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC
SMPCDKESLENVGRFFKEAINIAGEDVKLGWEPRGECSRRREVLELIKENGLIHVVDPFK
CCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHCCEEEEECCCC
TMPVSLPGGVAYFRLHGIGGEVNYRYRYSDGDLMGLYKLITKLNPRVAYVMFNNIYMFED
CCCCCCCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHH
ALRFKKLVESMKT
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA