| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884462
Identifier: 218884462
GI number: 218884462
Start: 1080371
End: 1080826
Strand: Reverse
Name: 218884462
Synonym: DKAM_1151
Alternate gene names: NA
Gene position: 1080826-1080371 (Counterclockwise)
Preceding gene: 218884463
Following gene: 218884461
Centisome position: 79.17
GC content: 43.64
Gene sequence:
>456_bases ATGATCACAACGATTGTTTTACTCGTCTCCATTTCATCAGCCATATTAATATCCCTGCTTATTAAAGCTGTTAGGAATCA TCCATATTTCAGCGAAGCTGTTAAGACATACCAGAGTATACAGGTTCCCGAAACCCCTAGGAGCAAGGGGGATGTGAGGA GGCTTAGGAAGTATAGGGCTCTATATAGGTCTGCGAGGAGGAGAATGCTCCTTCTCTTCGTAATACATATATCCGTCTTC TCGCTAGTCTATACGCTGATGATACTAGTTGTCTCGCTAATAGCTCGTTCAACCCAGTACGTGGATATACCCGTGTCAAT ACCCTTCCTCTCTGGTTTAAACACTGAGAGAGGCATTTACTACACGCATATATACATTATAGCCTTAATCGGCTTCGCTG TACCAATATACCTGGTCTCAAGGAGCATTAGGCTGGAATCAAGACAACCACCCTAG
Upstream 100 bases:
>100_bases TGCTGGCTATAGGTATCCTGCAGCAGTACTACGCGTTAATAGCTTACGAGAGAACTCTCGAGGCATACCCGTTGCTAAGG CGCCTTGTGGGAGAGTAGTA
Downstream 100 bases:
>100_bases TAAAATTTAAGAACCTCTCGTAAATTATTACTCTAGAGCTAGAAATGCTTATGGTGAGGCATCGATGCCTAGGCCAATGT ATAGGAATAGGAGTTGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MITTIVLLVSISSAILISLLIKAVRNHPYFSEAVKTYQSIQVPETPRSKGDVRRLRKYRALYRSARRRMLLLFVIHISVF SLVYTLMILVVSLIARSTQYVDIPVSIPFLSGLNTERGIYYTHIYIIALIGFAVPIYLVSRSIRLESRQPP
Sequences:
>Translated_151_residues MITTIVLLVSISSAILISLLIKAVRNHPYFSEAVKTYQSIQVPETPRSKGDVRRLRKYRALYRSARRRMLLLFVIHISVF SLVYTLMILVVSLIARSTQYVDIPVSIPFLSGLNTERGIYYTHIYIIALIGFAVPIYLVSRSIRLESRQPP >Mature_151_residues MITTIVLLVSISSAILISLLIKAVRNHPYFSEAVKTYQSIQVPETPRSKGDVRRLRKYRALYRSARRRMLLLFVIHISVF SLVYTLMILVVSLIARSTQYVDIPVSIPFLSGLNTERGIYYTHIYIIALIGFAVPIYLVSRSIRLESRQPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17297; Mature: 17297
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTIVLLVSISSAILISLLIKAVRNHPYFSEAVKTYQSIQVPETPRSKGDVRRLRKYRA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LYRSARRRMLLLFVIHISVFSLVYTLMILVVSLIARSTQYVDIPVSIPFLSGLNTERGIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEECHHHCCCCCCCCHH YTHIYIIALIGFAVPIYLVSRSIRLESRQPP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MITTIVLLVSISSAILISLLIKAVRNHPYFSEAVKTYQSIQVPETPRSKGDVRRLRKYRA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LYRSARRRMLLLFVIHISVFSLVYTLMILVVSLIARSTQYVDIPVSIPFLSGLNTERGIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEECHHHCCCCCCCCHH YTHIYIIALIGFAVPIYLVSRSIRLESRQPP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA