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The map label for this gene is rpl34e [H]

Identifier: 218884461

GI number: 218884461

Start: 1080034

End: 1080294

Strand: Reverse

Name: rpl34e [H]

Synonym: DKAM_1150

Alternate gene names: 218884461

Gene position: 1080294-1080034 (Counterclockwise)

Preceding gene: 218884462

Following gene: 218884460

Centisome position: 79.13

GC content: 49.43

Gene sequence:

>261_bases
ATGTATAGGAATAGGAGTTGGAGAAGAATTATTGTTAAAACACCTGGCGGAGATGTCAGTGTGCATTATGAGAAGAGGAG
GCCTAATGCGGCTAGGTGTGCTATATGTGGTAGACCACTCAACGGGGTTCCAGCTCTAAGGCCGGTGGAGCTCCGTAAAC
TAGCTAAGACCGAGAAGCGTCCTGAGAGGCCCTATGGAGGCTATATATGTCACGAGTGTCTTGCAAGGGGTATAAGGGAG
GCTGTGAGGCAAGCACTCTAA

Upstream 100 bases:

>100_bases
CTGGAATCAAGACAACCACCCTAGTAAAATTTAAGAACCTCTCGTAAATTATTACTCTAGAGCTAGAAATGCTTATGGTG
AGGCATCGATGCCTAGGCCA

Downstream 100 bases:

>100_bases
CCCCTGTTCCCTCTAGCGGTGTCTTAAATTGGTTAAGATAGTTTTTAGCGGGCCGCCTGGTAGTGGTAAGACGACCCAGG
CTAAACGCGTTGCCGAATAC

Product: 50S ribosomal protein L34e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MYRNRSWRRIIVKTPGGDVSVHYEKRRPNAARCAICGRPLNGVPALRPVELRKLAKTEKRPERPYGGYICHECLARGIRE
AVRQAL

Sequences:

>Translated_86_residues
MYRNRSWRRIIVKTPGGDVSVHYEKRRPNAARCAICGRPLNGVPALRPVELRKLAKTEKRPERPYGGYICHECLARGIRE
AVRQAL
>Mature_86_residues
MYRNRSWRRIIVKTPGGDVSVHYEKRRPNAARCAICGRPLNGVPALRPVELRKLAKTEKRPERPYGGYICHECLARGIRE
AVRQAL

Specific function: Unknown

COG id: COG2174

COG function: function code J; Ribosomal protein L34E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34e family [H]

Homologues:

Organism=Drosophila melanogaster, GI24650255, Length=73, Percent_Identity=42.4657534246575, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24650253, Length=73, Percent_Identity=42.4657534246575, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24645339, Length=73, Percent_Identity=42.4657534246575, Blast_Score=62, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24645341, Length=73, Percent_Identity=42.4657534246575, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008195
- InterPro:   IPR018065 [H]

Pfam domain/function: PF01199 Ribosomal_L34e [H]

EC number: NA

Molecular weight: Translated: 9883; Mature: 9883

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRNRSWRRIIVKTPGGDVSVHYEKRRPNAARCAICGRPLNGVPALRPVELRKLAKTEKR
CCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC
PERPYGGYICHECLARGIREAVRQAL
CCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYRNRSWRRIIVKTPGGDVSVHYEKRRPNAARCAICGRPLNGVPALRPVELRKLAKTEKR
CCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC
PERPYGGYICHECLARGIREAVRQAL
CCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA