| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884445
Identifier: 218884445
GI number: 218884445
Start: 1066958
End: 1068289
Strand: Reverse
Name: 218884445
Synonym: DKAM_1134
Alternate gene names: NA
Gene position: 1068289-1066958 (Counterclockwise)
Preceding gene: 218884446
Following gene: 218884444
Centisome position: 78.25
GC content: 44.44
Gene sequence:
>1332_bases ATGAGTAGGGTTGACACGGTTATACTATTGCTCATTGTATTAGTGGGTATGCTTGTTAGAGTCCCTTTCCTATGGACTAC CTGTGGTAGTGACGTGGTTCAGTTCGCTGGTTTCGCAGATACCTTTCTACACCATGGTTTCCACTTCTATGATTACAACT ACCTTGAGGCACCCGGCAATAACTGGCCGTATCCATGGAAGTATATTTATGGACCTGTACTCCTCCTCATATTGGCTCCT TTAAGACTTATAGCACCGGATCCTGTGAAGGTGGTCAGGGATCACGGGTTGAATATATATGCCTCCCCATCGTGGTGTGG GATTGTTAAATCTGTCTTCTCATTATTTGATGTTCTAACAGGGATCATGATCTACTATACTGCTAGAAGGATTTTTTCGA CGAGTAGGCTGGTGGCAGCGATTGCTTCCTTACTATACTTATTGAACCCGATGACCATATATATCTCAGCGATATATGGC ATGTTTGATAACATGGCTTTATTCTTCCTGCTCCTTGGGTTATACATGTACATGGATGGCAGGCATATGTTAGCCGGGTT GTTCATCGCTGGGTTCTCGGTCTCCGTTAAGCAGACTATCCTGCCTTCACTGCTAGTGTTGATTACCGATGTCTTCAAGA AGCATGGTTTATCGGGGGCTTCATTAAAGTATATCATGGTGGTTTTAACAGGTGCATTAGTCCCCTTCACCCCATTCATC ATTGCTAGCCCGGGCACGATGGGATCACTGCTTAATGCATTGCTAGAATCATCTAAGCCTGGATATACTGAGCCCGTTGT ATATAGTTTCAACGGTTTATCAAGCCTCATCACGTATAATTTCAGGGGTTACATCTGGGTTATTGAGTCATGGTGGGTTT TCTTCACTGTTATAACCCTCTCACTCCTACTACTATACTATAAGCAGGGGAGTACTTTACTCCTATGTGTCTCACTCGCG TACATTGCTTTTACTGCTTTCTACTGGAGGGTGAACCACCAATACCTGGTTCCACTAATAGCCTATATATCTCTGCTACT GGTAGCCGGGGAGAACGCTGTATCTAAGCCCCTCTTATTATTTACATATATATGGATAGGGTTATGGCCTGTGGCGTTTC CCACGAGCTGGTGGAGTCATGTACACATTGAGAATCCAGATGTGAATATATGGAGGCTCCTGGACTCCATTACTCTAATG ATCTTTGATCCGGCCTTCTACGTAGCCTACTCGCTTGCCTTAACAACAAGCTTCTACATCATTATAGGATCCACTATGGT GCACTGGTTGAAACAGTTGATGAATAAGAGGAGTGCCGCCGCCGGGATTTGA
Upstream 100 bases:
>100_bases CCTAGGTGTTCACTCCAATTATATATGTTCATGGCCGCACCTTATTCTAGTAATAATATGATTGTTGAATCATGTGGATC ATGTGGTTTAGGTGTATTCC
Downstream 100 bases:
>100_bases ACCCGGGTCTCCCGCACCCTCTCCTCAACGGGCCTTAGGGTGTCACGGGCTCGAGAGGCCCGCATACTTGACCGGGCTAT ACTACGGCGGCAGTCCGGAT
Product: PMT multi-domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSRVDTVILLLIVLVGMLVRVPFLWTTCGSDVVQFAGFADTFLHHGFHFYDYNYLEAPGNNWPYPWKYIYGPVLLLILAP LRLIAPDPVKVVRDHGLNIYASPSWCGIVKSVFSLFDVLTGIMIYYTARRIFSTSRLVAAIASLLYLLNPMTIYISAIYG MFDNMALFFLLLGLYMYMDGRHMLAGLFIAGFSVSVKQTILPSLLVLITDVFKKHGLSGASLKYIMVVLTGALVPFTPFI IASPGTMGSLLNALLESSKPGYTEPVVYSFNGLSSLITYNFRGYIWVIESWWVFFTVITLSLLLLYYKQGSTLLLCVSLA YIAFTAFYWRVNHQYLVPLIAYISLLLVAGENAVSKPLLLFTYIWIGLWPVAFPTSWWSHVHIENPDVNIWRLLDSITLM IFDPAFYVAYSLALTTSFYIIIGSTMVHWLKQLMNKRSAAAGI
Sequences:
>Translated_443_residues MSRVDTVILLLIVLVGMLVRVPFLWTTCGSDVVQFAGFADTFLHHGFHFYDYNYLEAPGNNWPYPWKYIYGPVLLLILAP LRLIAPDPVKVVRDHGLNIYASPSWCGIVKSVFSLFDVLTGIMIYYTARRIFSTSRLVAAIASLLYLLNPMTIYISAIYG MFDNMALFFLLLGLYMYMDGRHMLAGLFIAGFSVSVKQTILPSLLVLITDVFKKHGLSGASLKYIMVVLTGALVPFTPFI IASPGTMGSLLNALLESSKPGYTEPVVYSFNGLSSLITYNFRGYIWVIESWWVFFTVITLSLLLLYYKQGSTLLLCVSLA YIAFTAFYWRVNHQYLVPLIAYISLLLVAGENAVSKPLLLFTYIWIGLWPVAFPTSWWSHVHIENPDVNIWRLLDSITLM IFDPAFYVAYSLALTTSFYIIIGSTMVHWLKQLMNKRSAAAGI >Mature_442_residues SRVDTVILLLIVLVGMLVRVPFLWTTCGSDVVQFAGFADTFLHHGFHFYDYNYLEAPGNNWPYPWKYIYGPVLLLILAPL RLIAPDPVKVVRDHGLNIYASPSWCGIVKSVFSLFDVLTGIMIYYTARRIFSTSRLVAAIASLLYLLNPMTIYISAIYGM FDNMALFFLLLGLYMYMDGRHMLAGLFIAGFSVSVKQTILPSLLVLITDVFKKHGLSGASLKYIMVVLTGALVPFTPFII ASPGTMGSLLNALLESSKPGYTEPVVYSFNGLSSLITYNFRGYIWVIESWWVFFTVITLSLLLLYYKQGSTLLLCVSLAY IAFTAFYWRVNHQYLVPLIAYISLLLVAGENAVSKPLLLFTYIWIGLWPVAFPTSWWSHVHIENPDVNIWRLLDSITLMI FDPAFYVAYSLALTTSFYIIIGSTMVHWLKQLMNKRSAAAGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50022; Mature: 49891
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVDTVILLLIVLVGMLVRVPFLWTTCGSDVVQFAGFADTFLHHGFHFYDYNYLEAPGN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCEEECCCC NWPYPWKYIYGPVLLLILAPLRLIAPDPVKVVRDHGLNIYASPSWCGIVKSVFSLFDVLT CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH GIMIYYTARRIFSTSRLVAAIASLLYLLNPMTIYISAIYGMFDNMALFFLLLGLYMYMDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RHMLAGLFIAGFSVSVKQTILPSLLVLITDVFKKHGLSGASLKYIMVVLTGALVPFTPFI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE IASPGTMGSLLNALLESSKPGYTEPVVYSFNGLSSLITYNFRGYIWVIESWWVFFTVITL EECCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHEECCCEEEEEHHHHHHHHHHHHH SLLLLYYKQGSTLLLCVSLAYIAFTAFYWRVNHQYLVPLIAYISLLLVAGENAVSKPLLL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCHHHH FTYIWIGLWPVAFPTSWWSHVHIENPDVNIWRLLDSITLMIFDPAFYVAYSLALTTSFYI HHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IIGSTMVHWLKQLMNKRSAAAGI HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRVDTVILLLIVLVGMLVRVPFLWTTCGSDVVQFAGFADTFLHHGFHFYDYNYLEAPGN CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCEEECCCC NWPYPWKYIYGPVLLLILAPLRLIAPDPVKVVRDHGLNIYASPSWCGIVKSVFSLFDVLT CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH GIMIYYTARRIFSTSRLVAAIASLLYLLNPMTIYISAIYGMFDNMALFFLLLGLYMYMDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RHMLAGLFIAGFSVSVKQTILPSLLVLITDVFKKHGLSGASLKYIMVVLTGALVPFTPFI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE IASPGTMGSLLNALLESSKPGYTEPVVYSFNGLSSLITYNFRGYIWVIESWWVFFTVITL EECCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHEECCCEEEEEHHHHHHHHHHHHH SLLLLYYKQGSTLLLCVSLAYIAFTAFYWRVNHQYLVPLIAYISLLLVAGENAVSKPLLL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCHHHH FTYIWIGLWPVAFPTSWWSHVHIENPDVNIWRLLDSITLMIFDPAFYVAYSLALTTSFYI HHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IIGSTMVHWLKQLMNKRSAAAGI HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA