| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is adhA [H]
Identifier: 218884444
GI number: 218884444
Start: 1065752
End: 1066765
Strand: Reverse
Name: adhA [H]
Synonym: DKAM_1133
Alternate gene names: 218884444
Gene position: 1066765-1065752 (Counterclockwise)
Preceding gene: 218884445
Following gene: 218884441
Centisome position: 78.14
GC content: 49.31
Gene sequence:
>1014_bases GTGTATACGTTGAGGGCGATGGTTCTCTATTCTCCAGCTCCTGTCGAGTCAAGGCCGTTGAAATACATGGATGTCGAGAA ACCAAGCCCCGGTAGAGGCGAGGTCTTGATAAGGATCCTCAAATGCGGCGTGTGTAGGACGGATCTCCACATTGTTGAAG GCGAGTTGAAACCTGTAAAGCTCCCACTGATACCCGGGCACCAGGTAATCGGTGTAGTAGAAGATGTAGGTGAGGGGGTT GAAGGAGTTAGGAGGGGAGAGCGTGTTGGAGTTCCATGGCTATACTATGCTTGTGGTGAATGCAGGTATTGTAGAAGGGG TCTCGAGAATCTCTGTGAAAACGCTTTATTCACAGGCTACAGTGTGGACGGCGGGTACGCTGAGTACATGGTTGCAAAGG CAGGCTTCATACATAGGATACCTGATGGAATAGATGACACCCATGCAGCTCCATTAATGTGTGCTGGTGCAATAGGCTAT AGATCCCTAAAGCTAACGGGGCTCCTTGGTAAGGGTGATGCAACCCTGGGTCTATTTGGCTACGGTGCAGCCGCACACCT TGTTCTACAGGTGGCTAGGAGGCTTGGCTTAAGAGTATACGTGTTCACGAGTAATAGGTGGAAGATAGAGAAGGCTCTCG AGAACGGTGCCGAATGGGCTGGCTCAACAAGTGAGGAGCCCCCGCGTAGACTCGATGCCGCAATAGTGTATGCACCTGTG TCCAGTGTCTTCATTGAGGCATTGAAGAAGATAGATAAGGGTGGGAGAGTAGTATTGGCTGAGATATATATGACTCCAAT CGAGCAGCTGGACTACAGCCTCCTATGGCATGAGAAAGAAGTTAAAAGCGTTGCGAATGTAACTAGGAAGGATGTAGGAG AGTTCCTAGAGGTAGCCAGTAGACACGGTGTGAAGCCTGAAGTGAAAACCTATAGGCTTAGCGAGGCCAATGAGGCATTA ATAGAGTTAAAGAAGGGAGGACACTTAGGGCAACTAGTACTAGATGTAGCTTAA
Upstream 100 bases:
>100_bases GTCCGGATATGAATCATATGGATCAAGGTTTTTAAAACATTACTATCCAAGGTTTAAATAGTGTTTCACAGATTAGAGAA CACAGGCTTGAGATTGTAAG
Downstream 100 bases:
>100_bases ATCTACTCTTCACACATACTCCAAAGATCCACTGTTAAATCCGGGTTTTCAAGCGCTATGCTGTAGGTTGAGTGGTTAAA GCTTATCGACACAGCCTTAA
Product: alcohol dehydrogenase, zinc-containing
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MYTLRAMVLYSPAPVESRPLKYMDVEKPSPGRGEVLIRILKCGVCRTDLHIVEGELKPVKLPLIPGHQVIGVVEDVGEGV EGVRRGERVGVPWLYYACGECRYCRRGLENLCENALFTGYSVDGGYAEYMVAKAGFIHRIPDGIDDTHAAPLMCAGAIGY RSLKLTGLLGKGDATLGLFGYGAAAHLVLQVARRLGLRVYVFTSNRWKIEKALENGAEWAGSTSEEPPRRLDAAIVYAPV SSVFIEALKKIDKGGRVVLAEIYMTPIEQLDYSLLWHEKEVKSVANVTRKDVGEFLEVASRHGVKPEVKTYRLSEANEAL IELKKGGHLGQLVLDVA
Sequences:
>Translated_337_residues MYTLRAMVLYSPAPVESRPLKYMDVEKPSPGRGEVLIRILKCGVCRTDLHIVEGELKPVKLPLIPGHQVIGVVEDVGEGV EGVRRGERVGVPWLYYACGECRYCRRGLENLCENALFTGYSVDGGYAEYMVAKAGFIHRIPDGIDDTHAAPLMCAGAIGY RSLKLTGLLGKGDATLGLFGYGAAAHLVLQVARRLGLRVYVFTSNRWKIEKALENGAEWAGSTSEEPPRRLDAAIVYAPV SSVFIEALKKIDKGGRVVLAEIYMTPIEQLDYSLLWHEKEVKSVANVTRKDVGEFLEVASRHGVKPEVKTYRLSEANEAL IELKKGGHLGQLVLDVA >Mature_337_residues MYTLRAMVLYSPAPVESRPLKYMDVEKPSPGRGEVLIRILKCGVCRTDLHIVEGELKPVKLPLIPGHQVIGVVEDVGEGV EGVRRGERVGVPWLYYACGECRYCRRGLENLCENALFTGYSVDGGYAEYMVAKAGFIHRIPDGIDDTHAAPLMCAGAIGY RSLKLTGLLGKGDATLGLFGYGAAAHLVLQVARRLGLRVYVFTSNRWKIEKALENGAEWAGSTSEEPPRRLDAAIVYAPV SSVFIEALKKIDKGGRVVLAEIYMTPIEQLDYSLLWHEKEVKSVANVTRKDVGEFLEVASRHGVKPEVKTYRLSEANEAL IELKKGGHLGQLVLDVA
Specific function: Preferred Specificity Is Towards 1-Propanol. [C]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI71743840, Length=234, Percent_Identity=30.7692307692308, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI262073058, Length=234, Percent_Identity=30.7692307692308, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI4501933, Length=225, Percent_Identity=29.3333333333333, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI34577061, Length=225, Percent_Identity=29.3333333333333, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI4501929, Length=225, Percent_Identity=28, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI71565154, Length=226, Percent_Identity=29.646017699115, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI71565152, Length=264, Percent_Identity=26.1363636363636, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI156627571, Length=214, Percent_Identity=29.4392523364486, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI194239676, Length=197, Percent_Identity=26.9035532994924, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI194239674, Length=197, Percent_Identity=26.9035532994924, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI13236495, Length=197, Percent_Identity=26.9035532994924, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI4501939, Length=235, Percent_Identity=26.8085106382979, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI156523966, Length=235, Percent_Identity=26.8085106382979, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI87081918, Length=316, Percent_Identity=32.9113924050633, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1787863, Length=321, Percent_Identity=28.0373831775701, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1786518, Length=336, Percent_Identity=28.2738095238095, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI87082401, Length=309, Percent_Identity=25.8899676375405, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790045, Length=267, Percent_Identity=29.9625468164794, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI226510992, Length=151, Percent_Identity=32.4503311258278, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1786552, Length=235, Percent_Identity=30.2127659574468, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1788073, Length=187, Percent_Identity=31.5508021390374, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI87082125, Length=208, Percent_Identity=28.3653846153846, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786825, Length=237, Percent_Identity=25.7383966244726, Blast_Score=75, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17562584, Length=333, Percent_Identity=27.6276276276276, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17562582, Length=326, Percent_Identity=27.3006134969325, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71988145, Length=338, Percent_Identity=25.1479289940828, Blast_Score=101, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17562876, Length=130, Percent_Identity=33.8461538461538, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI25146526, Length=235, Percent_Identity=26.8085106382979, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17562878, Length=120, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71997431, Length=237, Percent_Identity=26.5822784810127, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324486, Length=335, Percent_Identity=32.5373134328358, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6323961, Length=354, Percent_Identity=31.9209039548023, Blast_Score=133, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6323729, Length=330, Percent_Identity=30, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6319621, Length=351, Percent_Identity=29.3447293447293, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323980, Length=314, Percent_Identity=28.9808917197452, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6319949, Length=313, Percent_Identity=29.7124600638978, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6319258, Length=212, Percent_Identity=30.6603773584906, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6320033, Length=228, Percent_Identity=28.9473684210526, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI17737895, Length=101, Percent_Identity=36.6336633663366, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI221457811, Length=118, Percent_Identity=31.3559322033898, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550770, Length=118, Percent_Identity=31.3559322033898, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45551930, Length=118, Percent_Identity=31.3559322033898, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI17737897, Length=212, Percent_Identity=28.3018867924528, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR014187 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 37037; Mature: 37037
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTLRAMVLYSPAPVESRPLKYMDVEKPSPGRGEVLIRILKCGVCRTDLHIVEGELKPVK CCEEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEE LPLIPGHQVIGVVEDVGEGVEGVRRGERVGVPWLYYACGECRYCRRGLENLCENALFTGY EECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHCCCC SVDGGYAEYMVAKAGFIHRIPDGIDDTHAAPLMCAGAIGYRSLKLTGLLGKGDATLGLFG CCCCCHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEH YGAAAHLVLQVARRLGLRVYVFTSNRWKIEKALENGAEWAGSTSEEPPRRLDAAIVYAPV HHHHHHHHHHHHHHCCCEEEEEECCCEEHHHHHHCCHHCCCCCCCCCCHHHCCEEEEHHH SSVFIEALKKIDKGGRVVLAEIYMTPIEQLDYSLLWHEKEVKSVANVTRKDVGEFLEVAS HHHHHHHHHHHCCCCCEEEEEEHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHGVKPEVKTYRLSEANEALIELKKGGHLGQLVLDVA HCCCCCCHHEEEECCHHHHHHHHHCCCCEEHEEEECC >Mature Secondary Structure MYTLRAMVLYSPAPVESRPLKYMDVEKPSPGRGEVLIRILKCGVCRTDLHIVEGELKPVK CCEEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEE LPLIPGHQVIGVVEDVGEGVEGVRRGERVGVPWLYYACGECRYCRRGLENLCENALFTGY EECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHCCCC SVDGGYAEYMVAKAGFIHRIPDGIDDTHAAPLMCAGAIGYRSLKLTGLLGKGDATLGLFG CCCCCHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEH YGAAAHLVLQVARRLGLRVYVFTSNRWKIEKALENGAEWAGSTSEEPPRRLDAAIVYAPV HHHHHHHHHHHHHHCCCEEEEEECCCEEHHHHHHCCHHCCCCCCCCCCHHHCCEEEEHHH SSVFIEALKKIDKGGRVVLAEIYMTPIEQLDYSLLWHEKEVKSVANVTRKDVGEFLEVAS HHHHHHHHHHHCCCCCEEEEEEHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHGVKPEVKTYRLSEANEALIELKKGGHLGQLVLDVA HCCCCCCHHEEEECCHHHHHHHHHCCCCEEHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]