| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884446
Identifier: 218884446
GI number: 218884446
Start: 1068426
End: 1069679
Strand: Reverse
Name: 218884446
Synonym: DKAM_1135
Alternate gene names: NA
Gene position: 1069679-1068426 (Counterclockwise)
Preceding gene: 218884447
Following gene: 218884445
Centisome position: 78.35
GC content: 45.69
Gene sequence:
>1254_bases ATGGTGGAGTGGGTCGGCTTGGTTAATGATCCACTGGCTGTAGTAGGACCATTTGCAACCATTATTGGTGGGGCTGAAGT AGTAAAGATGTGGGCTTCAATAGTATTGAAGAAGGTTGGCTACAGGGTTCTACTTGCCGGTCTCGCCCCCATTAGGCTGG GGGGTTTTATTACAGGTGTACAGGGCTTAAGCGATGTGGAAGTGTATAGTTTATTCAAGTGGTTTCCACAGGTATTCATA CTCTACCAGATGCAACTTAGTAATATAGTCGTTGAGAAAGCAGTGAAACATCGCAGACCGGACCTGGTCTTCATAGATAA CGAGGGCTCTAAGGGGATCGATGAGTTAAAGAGGGTTATCGGCTTTAAGCTGGTTAAATACATTCACTTCCCCCACAGCA TCTATGTGGCCACAGAGAATTGTAGTAGTTTTAAGAGCAGGAAGATAGAGTCCTACTGTCGTGATGCTGTATCTTACTCT AGGAAGTACTTCTCAACGGTTTTCTGGAACGCTTACTGGGCTATATACCTGAAACTACTGGAGGCAAGCATCCCTGAAGA CCCATTCCTACACACGGATCTCGTTATAACTAACTCGGAGTACACGGGGGATATACTTAGGGAATTATATGGCGTTGAGC CACTAGTATTACATCCACCAGTATACATCGAGGACCTCCTCAGCTGCGGGAGAAAAGGGTTCGATGAAAGAGAGAATAGC GTGGTTATGGTTGGTAGAGTGAGTAGTGAGAAAAGACATGATGACGTTATAAGAGCTATAGCCTTGCTGGAGGAGCGGCC TACGTTGAAGATCATAGGCGCGTTAACAAGGGGAAATATCAACTACTTAACACATCTAAGGAGGCTTGCCGTGAAACACA GGGTAAGGCTAGAACTATACCTTAACGCATCCAGGGAGACGTTGATCGAGAACCTTTGCTCATCCAAGATATTTGTACAT GCCACAGTAGGCGAGCACTTCGGTATTGCCGTGGTTGAAGCCATGGCAGCCGGGATCCCAGTTATAGTGAATAGGAATAG TGGGAGCTATAGGGATGTATTAGTCAACGGGTATTATGGGTTAGGCTATTCATCGATAAGGGAGCTCTCAGAGCTGTTGA AGAGCCTGATACACGATAAGGTGTTATGGAGTAAATATCATGATCTCTCGCTATCTAGGAGTATAGAATATGATTCCAGA GTGTTCGAGAAGGCTCTAGCCGATAAAATACGTGGCCTCCTGGATGCTGGATAG
Upstream 100 bases:
>100_bases AACACCGCCCAAGCTCGATAACAGCTCCTCTAAAAATTTTTAAATACCAGCTAGTTTCTAATTCATGGTTTTAAACACTG TTTCAACTATCTAAGACTTG
Downstream 100 bases:
>100_bases GTAACGTGAATAGGGTGTTTAATCCTGTCGTTTATCCCTAGGTGTTCACTCCAATTATATATGTTCATGGCCGCACCTTA TTCTAGTAATAATATGATTG
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyltransferase; Glycosyl Transferase Group 1 Protein
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MVEWVGLVNDPLAVVGPFATIIGGAEVVKMWASIVLKKVGYRVLLAGLAPIRLGGFITGVQGLSDVEVYSLFKWFPQVFI LYQMQLSNIVVEKAVKHRRPDLVFIDNEGSKGIDELKRVIGFKLVKYIHFPHSIYVATENCSSFKSRKIESYCRDAVSYS RKYFSTVFWNAYWAIYLKLLEASIPEDPFLHTDLVITNSEYTGDILRELYGVEPLVLHPPVYIEDLLSCGRKGFDERENS VVMVGRVSSEKRHDDVIRAIALLEERPTLKIIGALTRGNINYLTHLRRLAVKHRVRLELYLNASRETLIENLCSSKIFVH ATVGEHFGIAVVEAMAAGIPVIVNRNSGSYRDVLVNGYYGLGYSSIRELSELLKSLIHDKVLWSKYHDLSLSRSIEYDSR VFEKALADKIRGLLDAG
Sequences:
>Translated_417_residues MVEWVGLVNDPLAVVGPFATIIGGAEVVKMWASIVLKKVGYRVLLAGLAPIRLGGFITGVQGLSDVEVYSLFKWFPQVFI LYQMQLSNIVVEKAVKHRRPDLVFIDNEGSKGIDELKRVIGFKLVKYIHFPHSIYVATENCSSFKSRKIESYCRDAVSYS RKYFSTVFWNAYWAIYLKLLEASIPEDPFLHTDLVITNSEYTGDILRELYGVEPLVLHPPVYIEDLLSCGRKGFDERENS VVMVGRVSSEKRHDDVIRAIALLEERPTLKIIGALTRGNINYLTHLRRLAVKHRVRLELYLNASRETLIENLCSSKIFVH ATVGEHFGIAVVEAMAAGIPVIVNRNSGSYRDVLVNGYYGLGYSSIRELSELLKSLIHDKVLWSKYHDLSLSRSIEYDSR VFEKALADKIRGLLDAG >Mature_417_residues MVEWVGLVNDPLAVVGPFATIIGGAEVVKMWASIVLKKVGYRVLLAGLAPIRLGGFITGVQGLSDVEVYSLFKWFPQVFI LYQMQLSNIVVEKAVKHRRPDLVFIDNEGSKGIDELKRVIGFKLVKYIHFPHSIYVATENCSSFKSRKIESYCRDAVSYS RKYFSTVFWNAYWAIYLKLLEASIPEDPFLHTDLVITNSEYTGDILRELYGVEPLVLHPPVYIEDLLSCGRKGFDERENS VVMVGRVSSEKRHDDVIRAIALLEERPTLKIIGALTRGNINYLTHLRRLAVKHRVRLELYLNASRETLIENLCSSKIFVH ATVGEHFGIAVVEAMAAGIPVIVNRNSGSYRDVLVNGYYGLGYSSIRELSELLKSLIHDKVLWSKYHDLSLSRSIEYDSR VFEKALADKIRGLLDAG
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324280, Length=203, Percent_Identity=29.5566502463054, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47145; Mature: 47145
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEWVGLVNDPLAVVGPFATIIGGAEVVKMWASIVLKKVGYRVLLAGLAPIRLGGFITGV CCEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC QGLSDVEVYSLFKWFPQVFILYQMQLSNIVVEKAVKHRRPDLVFIDNEGSKGIDELKRVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH GFKLVKYIHFPHSIYVATENCSSFKSRKIESYCRDAVSYSRKYFSTVFWNAYWAIYLKLL HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EASIPEDPFLHTDLVITNSEYTGDILRELYGVEPLVLHPPVYIEDLLSCGRKGFDERENS HHCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCC VVMVGRVSSEKRHDDVIRAIALLEERPTLKIIGALTRGNINYLTHLRRLAVKHRVRLELY EEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHEEEEEE LNASRETLIENLCSSKIFVHATVGEHFGIAVVEAMAAGIPVIVNRNSGSYRDVLVNGYYG ECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCC LGYSSIRELSELLKSLIHDKVLWSKYHDLSLSRSIEYDSRVFEKALADKIRGLLDAG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVEWVGLVNDPLAVVGPFATIIGGAEVVKMWASIVLKKVGYRVLLAGLAPIRLGGFITGV CCEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC QGLSDVEVYSLFKWFPQVFILYQMQLSNIVVEKAVKHRRPDLVFIDNEGSKGIDELKRVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH GFKLVKYIHFPHSIYVATENCSSFKSRKIESYCRDAVSYSRKYFSTVFWNAYWAIYLKLL HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EASIPEDPFLHTDLVITNSEYTGDILRELYGVEPLVLHPPVYIEDLLSCGRKGFDERENS HHCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCC VVMVGRVSSEKRHDDVIRAIALLEERPTLKIIGALTRGNINYLTHLRRLAVKHRVRLELY EEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHEEEEEE LNASRETLIENLCSSKIFVHATVGEHFGIAVVEAMAAGIPVIVNRNSGSYRDVLVNGYYG ECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCC LGYSSIRELSELLKSLIHDKVLWSKYHDLSLSRSIEYDSRVFEKALADKIRGLLDAG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA