Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884446

Identifier: 218884446

GI number: 218884446

Start: 1068426

End: 1069679

Strand: Reverse

Name: 218884446

Synonym: DKAM_1135

Alternate gene names: NA

Gene position: 1069679-1068426 (Counterclockwise)

Preceding gene: 218884447

Following gene: 218884445

Centisome position: 78.35

GC content: 45.69

Gene sequence:

>1254_bases
ATGGTGGAGTGGGTCGGCTTGGTTAATGATCCACTGGCTGTAGTAGGACCATTTGCAACCATTATTGGTGGGGCTGAAGT
AGTAAAGATGTGGGCTTCAATAGTATTGAAGAAGGTTGGCTACAGGGTTCTACTTGCCGGTCTCGCCCCCATTAGGCTGG
GGGGTTTTATTACAGGTGTACAGGGCTTAAGCGATGTGGAAGTGTATAGTTTATTCAAGTGGTTTCCACAGGTATTCATA
CTCTACCAGATGCAACTTAGTAATATAGTCGTTGAGAAAGCAGTGAAACATCGCAGACCGGACCTGGTCTTCATAGATAA
CGAGGGCTCTAAGGGGATCGATGAGTTAAAGAGGGTTATCGGCTTTAAGCTGGTTAAATACATTCACTTCCCCCACAGCA
TCTATGTGGCCACAGAGAATTGTAGTAGTTTTAAGAGCAGGAAGATAGAGTCCTACTGTCGTGATGCTGTATCTTACTCT
AGGAAGTACTTCTCAACGGTTTTCTGGAACGCTTACTGGGCTATATACCTGAAACTACTGGAGGCAAGCATCCCTGAAGA
CCCATTCCTACACACGGATCTCGTTATAACTAACTCGGAGTACACGGGGGATATACTTAGGGAATTATATGGCGTTGAGC
CACTAGTATTACATCCACCAGTATACATCGAGGACCTCCTCAGCTGCGGGAGAAAAGGGTTCGATGAAAGAGAGAATAGC
GTGGTTATGGTTGGTAGAGTGAGTAGTGAGAAAAGACATGATGACGTTATAAGAGCTATAGCCTTGCTGGAGGAGCGGCC
TACGTTGAAGATCATAGGCGCGTTAACAAGGGGAAATATCAACTACTTAACACATCTAAGGAGGCTTGCCGTGAAACACA
GGGTAAGGCTAGAACTATACCTTAACGCATCCAGGGAGACGTTGATCGAGAACCTTTGCTCATCCAAGATATTTGTACAT
GCCACAGTAGGCGAGCACTTCGGTATTGCCGTGGTTGAAGCCATGGCAGCCGGGATCCCAGTTATAGTGAATAGGAATAG
TGGGAGCTATAGGGATGTATTAGTCAACGGGTATTATGGGTTAGGCTATTCATCGATAAGGGAGCTCTCAGAGCTGTTGA
AGAGCCTGATACACGATAAGGTGTTATGGAGTAAATATCATGATCTCTCGCTATCTAGGAGTATAGAATATGATTCCAGA
GTGTTCGAGAAGGCTCTAGCCGATAAAATACGTGGCCTCCTGGATGCTGGATAG

Upstream 100 bases:

>100_bases
AACACCGCCCAAGCTCGATAACAGCTCCTCTAAAAATTTTTAAATACCAGCTAGTTTCTAATTCATGGTTTTAAACACTG
TTTCAACTATCTAAGACTTG

Downstream 100 bases:

>100_bases
GTAACGTGAATAGGGTGTTTAATCCTGTCGTTTATCCCTAGGTGTTCACTCCAATTATATATGTTCATGGCCGCACCTTA
TTCTAGTAATAATATGATTG

Product: putative glycosyltransferase

Products: NA

Alternate protein names: Group 1 Glycosyltransferase; Glycosyl Transferase Group 1 Protein

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MVEWVGLVNDPLAVVGPFATIIGGAEVVKMWASIVLKKVGYRVLLAGLAPIRLGGFITGVQGLSDVEVYSLFKWFPQVFI
LYQMQLSNIVVEKAVKHRRPDLVFIDNEGSKGIDELKRVIGFKLVKYIHFPHSIYVATENCSSFKSRKIESYCRDAVSYS
RKYFSTVFWNAYWAIYLKLLEASIPEDPFLHTDLVITNSEYTGDILRELYGVEPLVLHPPVYIEDLLSCGRKGFDERENS
VVMVGRVSSEKRHDDVIRAIALLEERPTLKIIGALTRGNINYLTHLRRLAVKHRVRLELYLNASRETLIENLCSSKIFVH
ATVGEHFGIAVVEAMAAGIPVIVNRNSGSYRDVLVNGYYGLGYSSIRELSELLKSLIHDKVLWSKYHDLSLSRSIEYDSR
VFEKALADKIRGLLDAG

Sequences:

>Translated_417_residues
MVEWVGLVNDPLAVVGPFATIIGGAEVVKMWASIVLKKVGYRVLLAGLAPIRLGGFITGVQGLSDVEVYSLFKWFPQVFI
LYQMQLSNIVVEKAVKHRRPDLVFIDNEGSKGIDELKRVIGFKLVKYIHFPHSIYVATENCSSFKSRKIESYCRDAVSYS
RKYFSTVFWNAYWAIYLKLLEASIPEDPFLHTDLVITNSEYTGDILRELYGVEPLVLHPPVYIEDLLSCGRKGFDERENS
VVMVGRVSSEKRHDDVIRAIALLEERPTLKIIGALTRGNINYLTHLRRLAVKHRVRLELYLNASRETLIENLCSSKIFVH
ATVGEHFGIAVVEAMAAGIPVIVNRNSGSYRDVLVNGYYGLGYSSIRELSELLKSLIHDKVLWSKYHDLSLSRSIEYDSR
VFEKALADKIRGLLDAG
>Mature_417_residues
MVEWVGLVNDPLAVVGPFATIIGGAEVVKMWASIVLKKVGYRVLLAGLAPIRLGGFITGVQGLSDVEVYSLFKWFPQVFI
LYQMQLSNIVVEKAVKHRRPDLVFIDNEGSKGIDELKRVIGFKLVKYIHFPHSIYVATENCSSFKSRKIESYCRDAVSYS
RKYFSTVFWNAYWAIYLKLLEASIPEDPFLHTDLVITNSEYTGDILRELYGVEPLVLHPPVYIEDLLSCGRKGFDERENS
VVMVGRVSSEKRHDDVIRAIALLEERPTLKIIGALTRGNINYLTHLRRLAVKHRVRLELYLNASRETLIENLCSSKIFVH
ATVGEHFGIAVVEAMAAGIPVIVNRNSGSYRDVLVNGYYGLGYSSIRELSELLKSLIHDKVLWSKYHDLSLSRSIEYDSR
VFEKALADKIRGLLDAG

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6324280, Length=203, Percent_Identity=29.5566502463054, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47145; Mature: 47145

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEWVGLVNDPLAVVGPFATIIGGAEVVKMWASIVLKKVGYRVLLAGLAPIRLGGFITGV
CCEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
QGLSDVEVYSLFKWFPQVFILYQMQLSNIVVEKAVKHRRPDLVFIDNEGSKGIDELKRVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
GFKLVKYIHFPHSIYVATENCSSFKSRKIESYCRDAVSYSRKYFSTVFWNAYWAIYLKLL
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EASIPEDPFLHTDLVITNSEYTGDILRELYGVEPLVLHPPVYIEDLLSCGRKGFDERENS
HHCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCC
VVMVGRVSSEKRHDDVIRAIALLEERPTLKIIGALTRGNINYLTHLRRLAVKHRVRLELY
EEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHEEEEEE
LNASRETLIENLCSSKIFVHATVGEHFGIAVVEAMAAGIPVIVNRNSGSYRDVLVNGYYG
ECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCC
LGYSSIRELSELLKSLIHDKVLWSKYHDLSLSRSIEYDSRVFEKALADKIRGLLDAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVEWVGLVNDPLAVVGPFATIIGGAEVVKMWASIVLKKVGYRVLLAGLAPIRLGGFITGV
CCEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
QGLSDVEVYSLFKWFPQVFILYQMQLSNIVVEKAVKHRRPDLVFIDNEGSKGIDELKRVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
GFKLVKYIHFPHSIYVATENCSSFKSRKIESYCRDAVSYSRKYFSTVFWNAYWAIYLKLL
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EASIPEDPFLHTDLVITNSEYTGDILRELYGVEPLVLHPPVYIEDLLSCGRKGFDERENS
HHCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCC
VVMVGRVSSEKRHDDVIRAIALLEERPTLKIIGALTRGNINYLTHLRRLAVKHRVRLELY
EEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHEEEEEE
LNASRETLIENLCSSKIFVHATVGEHFGIAVVEAMAAGIPVIVNRNSGSYRDVLVNGYYG
ECCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCC
LGYSSIRELSELLKSLIHDKVLWSKYHDLSLSRSIEYDSRVFEKALADKIRGLLDAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA