| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883480
Identifier: 218883480
GI number: 218883480
Start: 154843
End: 155616
Strand: Direct
Name: 218883480
Synonym: DKAM_0166
Alternate gene names: NA
Gene position: 154843-155616 (Clockwise)
Preceding gene: 218883479
Following gene: 218883481
Centisome position: 11.34
GC content: 40.83
Gene sequence:
>774_bases GTGGTTTTCGTGGACGGTGTTTCCGAAGTATTTTCCACGATCTTACTGACATCGATATTCTTGGCCCTAGTATTTATACT CCTACCATTCAGCTATTACACTATCATGGGTAGTGTAGCTAAAACAGAGTACGAGTATGTTAAACATGGATTTTACTCTA TCGCCGCTTACTTCCCTATGATAGCTACCGGTGGTGAGTATAGTATTGATTTCCCATCGCAGTATACTTCACGAGGATAT ATCGAGATCGGTAGGATAGATATATATTTAAACAGTAGTTCCCAACCCACACTATCTTTCTCATGTATGGCTTTAACCCA GGGAGCTAATGTAGGCGGCGCTCCAAGAGGACTACTTTACGGCGTGGATACACATATTGTTAATGATTCAAGGATGATAC CGAGGATATACGAGTACAGGGATGGCAACGGCTTAATGATTATAACGCTTGATACTTGCAGGCTCCTCCTAGACGTCAAT ACGATTCCAACCGGTAATTATAGTGGCTACTACTATATCCTTACATACTATAATTTGACCATAAGTTTTAGAGGATCTGG GTCTTTAAGGATAGAACCTGTGAGAACGTATACTGCATATTCCAATATTGGTGGAAACCTATGGAATATAACTATAGTGG TCTCCGACTATATTCTCGGTAAATCATCCTCATACAACGTGATAGACCTGGTTAAAACTGGTTTTGGAAAAGAATACGCC GGCATCCCGTTTTCACTTACCATAGTAGTAGAGGAGTTAGTTGTGGAGGTGTAG
Upstream 100 bases:
>100_bases GTGACATTAAGATATAAATCATTGGATGAAATATTGGAAAAGTAAGTTGTAAATTATTATTAGGGTTAAAATAAATATTG ATATACTAAAAGATGATTTG
Downstream 100 bases:
>100_bases TGAAGTGGCTTCACCCATTATAACACATGTTATCGGCACCACGGTTATGATAGCTATTATTATAGCATTGATGAATTACG CGTCAATAGTGTATAATACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MVFVDGVSEVFSTILLTSIFLALVFILLPFSYYTIMGSVAKTEYEYVKHGFYSIAAYFPMIATGGEYSIDFPSQYTSRGY IEIGRIDIYLNSSSQPTLSFSCMALTQGANVGGAPRGLLYGVDTHIVNDSRMIPRIYEYRDGNGLMIITLDTCRLLLDVN TIPTGNYSGYYYILTYYNLTISFRGSGSLRIEPVRTYTAYSNIGGNLWNITIVVSDYILGKSSSYNVIDLVKTGFGKEYA GIPFSLTIVVEELVVEV
Sequences:
>Translated_257_residues MVFVDGVSEVFSTILLTSIFLALVFILLPFSYYTIMGSVAKTEYEYVKHGFYSIAAYFPMIATGGEYSIDFPSQYTSRGY IEIGRIDIYLNSSSQPTLSFSCMALTQGANVGGAPRGLLYGVDTHIVNDSRMIPRIYEYRDGNGLMIITLDTCRLLLDVN TIPTGNYSGYYYILTYYNLTISFRGSGSLRIEPVRTYTAYSNIGGNLWNITIVVSDYILGKSSSYNVIDLVKTGFGKEYA GIPFSLTIVVEELVVEV >Mature_257_residues MVFVDGVSEVFSTILLTSIFLALVFILLPFSYYTIMGSVAKTEYEYVKHGFYSIAAYFPMIATGGEYSIDFPSQYTSRGY IEIGRIDIYLNSSSQPTLSFSCMALTQGANVGGAPRGLLYGVDTHIVNDSRMIPRIYEYRDGNGLMIITLDTCRLLLDVN TIPTGNYSGYYYILTYYNLTISFRGSGSLRIEPVRTYTAYSNIGGNLWNITIVVSDYILGKSSSYNVIDLVKTGFGKEYA GIPFSLTIVVEELVVEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28574; Mature: 28574
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFVDGVSEVFSTILLTSIFLALVFILLPFSYYTIMGSVAKTEYEYVKHGFYSIAAYFPM CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATGGEYSIDFPSQYTSRGYIEIGRIDIYLNSSSQPTLSFSCMALTQGANVGGAPRGLLY EECCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCEEE GVDTHIVNDSRMIPRIYEYRDGNGLMIITLDTCRLLLDVNTIPTGNYSGYYYILTYYNLT ECEEEEECCCCCCCCEEEEECCCEEEEEEECCEEEEEEECCCCCCCCCCEEEEEEEEEEE ISFRGSGSLRIEPVRTYTAYSNIGGNLWNITIVVSDYILGKSSSYNVIDLVKTGFGKEYA EEEECCCCEEEEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCEEEEECCCCCCCCC GIPFSLTIVVEELVVEV CCCEEHHHHHHHHHHCC >Mature Secondary Structure MVFVDGVSEVFSTILLTSIFLALVFILLPFSYYTIMGSVAKTEYEYVKHGFYSIAAYFPM CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATGGEYSIDFPSQYTSRGYIEIGRIDIYLNSSSQPTLSFSCMALTQGANVGGAPRGLLY EECCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCEEE GVDTHIVNDSRMIPRIYEYRDGNGLMIITLDTCRLLLDVNTIPTGNYSGYYYILTYYNLT ECEEEEECCCCCCCCEEEEECCCEEEEEEECCEEEEEEECCCCCCCCCCEEEEEEEEEEE ISFRGSGSLRIEPVRTYTAYSNIGGNLWNITIVVSDYILGKSSSYNVIDLVKTGFGKEYA EEEECCCCEEEEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCEEEEECCCCCCCCC GIPFSLTIVVEELVVEV CCCEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA