Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883481

Identifier: 218883481

GI number: 218883481

Start: 155603

End: 158239

Strand: Direct

Name: 218883481

Synonym: DKAM_0167

Alternate gene names: NA

Gene position: 155603-158239 (Clockwise)

Preceding gene: 218883480

Following gene: 218883482

Centisome position: 11.4

GC content: 41.03

Gene sequence:

>2637_bases
TTGTGGAGGTGTAGTGAAGTGGCTTCACCCATTATAACACATGTTATCGGCACCACGGTTATGATAGCTATTATTATAGC
ATTGATGAATTACGCGTCAATAGTGTATAATACTACCAGGTATAACAATCTACAAGCTTTATACGAGGAGCTATCATCTA
GGATAGCGGCTAGAATAAATGGGGCTGTCATGGATGCTTATATTTGGAGAATAAATAATACGCTTATACAATTAGCGAAC
CCAGTGGAGTCGGCTTTTAACGAGGGTTACAATGTCTATGTAGGTAAGGGTGTTTACTTAAACCGGGTTTTCTCACGTGT
CCCGCCAGATACATCAATATATGTTGTTGTCTCAACACCTGATAACACAATATATGGTTATGCATTGGTGGGCAATATAA
GTAACCTAGAGGTGGCGAGAGGAAGCTTCATAGTTGACAGGTATAGGACGGGCTTTGATGCTGGAAACAGTTATGTGGAG
AACGGGGTTCCATTTCTCTGCCGTATGCCAATCAATATAAGTGAGAGAGCCGGGGTGTATCTAAGTGATTATCTAGTGCT
GGTGAACCTCTCATATAGTAGTGTAAACTGTACGTATCTAGGTAAAATATATGCTCCAAGTAGGAATGATGTGAGATTCA
CAGACTCCGATGGTGTGACGCCGTTGGACTACTATATAGAATACTGGAATGATACAAGTAAACAGGCATTGATATGGGTT
AAAATACCCTCGCTAAGCGCGTCAAGTAGTAAAACAATATACATGTATTGGGGTAACCCATATGCCGTGGATAAGAGTAA
TCCAGGCATCTTCACCCTAATAGACTATCTCGGTAGATACCAGGATCTAGGGGATTTACTGCTTGAAGGCGTATGGGGCA
TTAAGTATAATAACACTGTGGGTGAACCAAGCATAGTTGGGAACACCACTAGCCTAATGGTATCGACAAAATATACTAAC
TACGGCTACGTGAACATATATTCGTTAAGGCCTTTCAATTTGACTGGACGACAAGGATGGATCATCGAGGCTGTAGGGAC
ACCGGTCGACACAAGCGTAAATAGCCAGAACTACCGGGTAGGATTCTACATGTGGAACACTACTACTAGTGAGAAATATG
GTATACAGCTTATACCGCCAGTAATAGATCCATCAATAGATCTCACCCCATACACTATTATTTATGGGGGCTGGAACATA
ACCTCGGAGATCACTGGTGACGAAATAAATATTGTTATAGCCAATACTAATTTATCAATACTCCCCGCATCTAAGTCAAA
ATCTAATGTCTCTATAGCGATTGCACAGAGAAGCATAGGGTCGACCGGTGAAGGTGGATATGTAAGTATATTATATAAGG
TAAAAGTAGCCCCAGACAATATATATCGTGGATTAGTTTTAAGCAATAATCTAGTGAATCAGTCTAATCAGGCATACGCG
ATACTGCTCACAGCTGATACATCTGGGAATTTACAAGTGTGCACGTTAGATGTTGACCAATTATTAAATAATAATGTTGA
ATTCCTTGAATGTCAACCAACAAACGTAGACATTAATGGTGAAGAATGGTTCTACATCAACGTGACAATTAGAAATCCGG
CACAGGGGCAGGGTAATCCGGGTATGGATCTATATATTTATAGAACTGATGGCTCAGTAGTATATAGTAAATCAAGGGTT
GGTACAGTGGGACTACCCGGTAGGCCTGACTATATTGGACCAATAGTATACTATAATGGTGTATTAAGTAGCTATAACGG
ATCAAGATTCGATGACCTCATCGCGATAAGGTATAGTGAACCAGTTGATCTAACCACAGTGAAAGTCGTGGGTTTAACCC
CTGGATTAATCGTTGAATTAGATGACGGGGATTTCTCAGTTAACAATACAGCTGACGACAATGGTGTTGCACTACTCAAT
GTCTCTACAAGGCCAATCCTAGGTATCAATAACCCCATCGACTTATTCATTTACGCTGAGAATGGAACGTTGCTGGACTA
CTTCCAGATCAATAAAACTATCTCAGGGGGCACAATAATAGTTTACACACCGGAAATAAGGGAGTCCACGGAATCGTTCT
CTGCAATGATACATGCATCAGGCAATAATATCGGTAGCTGTACTCTTAATAGGAATCAATATGTATACCTAGCTAGCTAC
CCCAGCAACACCGGGTTCAATATTGTATGTAAGACATCCTGGCTGAACTGGGGCAGGTATTTGACGAGTATAGGTTATTA
TAATGGTTCGTTCTACTACTTCATATACGCAGTGAACCGTGAATTAAGGGATAGTAATAGCATTGCATTACCAGCTAATA
CTACTCCTCTATTATTCAGGGTTGTTTTCGGTGTATCATTAGAGGGCAAACTTTCGGGCCAGGTGAATCGGGTTAACACC
ACGGGTGTCTTTGAGAAGATATGGGTGAGACCATTCGTGTATCCTGAGCCAGCGGTATCTTACAGCGTGCTCGGCATTCA
GAATATCTCATTTCCTAAGCAACCGACGGTGATAGTAGATGAGTATACTGGTTATATTGTTTTCTCAAGTAAGTTAATGG
TGGATATTGTTGTAACAATAGACAATACTGGGAGAATAATTATTATCGAGGTTCCCAGGGGTGTAAGGGCACCGTGA

Upstream 100 bases:

>100_bases
AAATCATCCTCATACAACGTGATAGACCTGGTTAAAACTGGTTTTGGAAAAGAATACGCCGGCATCCCGTTTTCACTTAC
CATAGTAGTAGAGGAGTTAG

Downstream 100 bases:

>100_bases
AGGAGATTGTTGAATATGTGTTGGCGGTATTGATAGTATTATCTATAGTACCATTCTACAATATGGTTGTCACGCAATTC
TATACGCCGGAGAAAAGCGT

Product: Tfp pilus assembly protein tip-associated adhesin PilY1-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 878; Mature: 878

Protein sequence:

>878_residues
MWRCSEVASPIITHVIGTTVMIAIIIALMNYASIVYNTTRYNNLQALYEELSSRIAARINGAVMDAYIWRINNTLIQLAN
PVESAFNEGYNVYVGKGVYLNRVFSRVPPDTSIYVVVSTPDNTIYGYALVGNISNLEVARGSFIVDRYRTGFDAGNSYVE
NGVPFLCRMPINISERAGVYLSDYLVLVNLSYSSVNCTYLGKIYAPSRNDVRFTDSDGVTPLDYYIEYWNDTSKQALIWV
KIPSLSASSSKTIYMYWGNPYAVDKSNPGIFTLIDYLGRYQDLGDLLLEGVWGIKYNNTVGEPSIVGNTTSLMVSTKYTN
YGYVNIYSLRPFNLTGRQGWIIEAVGTPVDTSVNSQNYRVGFYMWNTTTSEKYGIQLIPPVIDPSIDLTPYTIIYGGWNI
TSEITGDEINIVIANTNLSILPASKSKSNVSIAIAQRSIGSTGEGGYVSILYKVKVAPDNIYRGLVLSNNLVNQSNQAYA
ILLTADTSGNLQVCTLDVDQLLNNNVEFLECQPTNVDINGEEWFYINVTIRNPAQGQGNPGMDLYIYRTDGSVVYSKSRV
GTVGLPGRPDYIGPIVYYNGVLSSYNGSRFDDLIAIRYSEPVDLTTVKVVGLTPGLIVELDDGDFSVNNTADDNGVALLN
VSTRPILGINNPIDLFIYAENGTLLDYFQINKTISGGTIIVYTPEIRESTESFSAMIHASGNNIGSCTLNRNQYVYLASY
PSNTGFNIVCKTSWLNWGRYLTSIGYYNGSFYYFIYAVNRELRDSNSIALPANTTPLLFRVVFGVSLEGKLSGQVNRVNT
TGVFEKIWVRPFVYPEPAVSYSVLGIQNISFPKQPTVIVDEYTGYIVFSSKLMVDIVVTIDNTGRIIIIEVPRGVRAP

Sequences:

>Translated_878_residues
MWRCSEVASPIITHVIGTTVMIAIIIALMNYASIVYNTTRYNNLQALYEELSSRIAARINGAVMDAYIWRINNTLIQLAN
PVESAFNEGYNVYVGKGVYLNRVFSRVPPDTSIYVVVSTPDNTIYGYALVGNISNLEVARGSFIVDRYRTGFDAGNSYVE
NGVPFLCRMPINISERAGVYLSDYLVLVNLSYSSVNCTYLGKIYAPSRNDVRFTDSDGVTPLDYYIEYWNDTSKQALIWV
KIPSLSASSSKTIYMYWGNPYAVDKSNPGIFTLIDYLGRYQDLGDLLLEGVWGIKYNNTVGEPSIVGNTTSLMVSTKYTN
YGYVNIYSLRPFNLTGRQGWIIEAVGTPVDTSVNSQNYRVGFYMWNTTTSEKYGIQLIPPVIDPSIDLTPYTIIYGGWNI
TSEITGDEINIVIANTNLSILPASKSKSNVSIAIAQRSIGSTGEGGYVSILYKVKVAPDNIYRGLVLSNNLVNQSNQAYA
ILLTADTSGNLQVCTLDVDQLLNNNVEFLECQPTNVDINGEEWFYINVTIRNPAQGQGNPGMDLYIYRTDGSVVYSKSRV
GTVGLPGRPDYIGPIVYYNGVLSSYNGSRFDDLIAIRYSEPVDLTTVKVVGLTPGLIVELDDGDFSVNNTADDNGVALLN
VSTRPILGINNPIDLFIYAENGTLLDYFQINKTISGGTIIVYTPEIRESTESFSAMIHASGNNIGSCTLNRNQYVYLASY
PSNTGFNIVCKTSWLNWGRYLTSIGYYNGSFYYFIYAVNRELRDSNSIALPANTTPLLFRVVFGVSLEGKLSGQVNRVNT
TGVFEKIWVRPFVYPEPAVSYSVLGIQNISFPKQPTVIVDEYTGYIVFSSKLMVDIVVTIDNTGRIIIIEVPRGVRAP
>Mature_878_residues
MWRCSEVASPIITHVIGTTVMIAIIIALMNYASIVYNTTRYNNLQALYEELSSRIAARINGAVMDAYIWRINNTLIQLAN
PVESAFNEGYNVYVGKGVYLNRVFSRVPPDTSIYVVVSTPDNTIYGYALVGNISNLEVARGSFIVDRYRTGFDAGNSYVE
NGVPFLCRMPINISERAGVYLSDYLVLVNLSYSSVNCTYLGKIYAPSRNDVRFTDSDGVTPLDYYIEYWNDTSKQALIWV
KIPSLSASSSKTIYMYWGNPYAVDKSNPGIFTLIDYLGRYQDLGDLLLEGVWGIKYNNTVGEPSIVGNTTSLMVSTKYTN
YGYVNIYSLRPFNLTGRQGWIIEAVGTPVDTSVNSQNYRVGFYMWNTTTSEKYGIQLIPPVIDPSIDLTPYTIIYGGWNI
TSEITGDEINIVIANTNLSILPASKSKSNVSIAIAQRSIGSTGEGGYVSILYKVKVAPDNIYRGLVLSNNLVNQSNQAYA
ILLTADTSGNLQVCTLDVDQLLNNNVEFLECQPTNVDINGEEWFYINVTIRNPAQGQGNPGMDLYIYRTDGSVVYSKSRV
GTVGLPGRPDYIGPIVYYNGVLSSYNGSRFDDLIAIRYSEPVDLTTVKVVGLTPGLIVELDDGDFSVNNTADDNGVALLN
VSTRPILGINNPIDLFIYAENGTLLDYFQINKTISGGTIIVYTPEIRESTESFSAMIHASGNNIGSCTLNRNQYVYLASY
PSNTGFNIVCKTSWLNWGRYLTSIGYYNGSFYYFIYAVNRELRDSNSIALPANTTPLLFRVVFGVSLEGKLSGQVNRVNT
TGVFEKIWVRPFVYPEPAVSYSVLGIQNISFPKQPTVIVDEYTGYIVFSSKLMVDIVVTIDNTGRIIIIEVPRGVRAP

Specific function: Unknown

COG id: COG5306

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97289; Mature: 97289

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRCSEVASPIITHVIGTTVMIAIIIALMNYASIVYNTTRYNNLQALYEELSSRIAARIN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCC
GAVMDAYIWRINNTLIQLANPVESAFNEGYNVYVGKGVYLNRVFSRVPPDTSIYVVVSTP
CEEEEEEEEEECCEEEEECCHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECC
DNTIYGYALVGNISNLEVARGSFIVDRYRTGFDAGNSYVENGVPFLCRMPINISERAGVY
CCCEEEEEEEECCCCEEEECCCEEEEHHHCCCCCCCCHHHCCCCEEEECCCCCCCCCCEE
LSDYLVLVNLSYSSVNCTYLGKIYAPSRNDVRFTDSDGVTPLDYYIEYWNDTSKQALIWV
EEEEEEEEEECCCEEEEEEEEEEECCCCCCEEEECCCCCCHHHHHEEECCCCCCCEEEEE
KIPSLSASSSKTIYMYWGNPYAVDKSNPGIFTLIDYLGRYQDLGDLLLEGVWGIKYNNTV
EECCCCCCCCCEEEEECCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEECCCC
GEPSIVGNTTSLMVSTKYTNYGYVNIYSLRPFNLTGRQGWIIEAVGTPVDTSVNSQNYRV
CCCCEECCCEEEEEEEEECCCCEEEEEEEECEECCCCCCEEEEECCCCCCCCCCCCCEEE
GFYMWNTTTSEKYGIQLIPPVIDPSIDLTPYTIIYGGWNITSEITGDEINIVIANTNLSI
EEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECEEEEEECCCCEEEEEEEECCEEE
LPASKSKSNVSIAIAQRSIGSTGEGGYVSILYKVKVAPDNIYRGLVLSNNLVNQSNQAYA
EECCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEE
ILLTADTSGNLQVCTLDVDQLLNNNVEFLECQPTNVDINGEEWFYINVTIRNPAQGQGNP
EEEEECCCCCEEEEEEEHHHHHCCCCEEEEEECCEEEECCCEEEEEEEEECCCCCCCCCC
GMDLYIYRTDGSVVYSKSRVGTVGLPGRPDYIGPIVYYNGVLSSYNGSRFDDLIAIRYSE
CCEEEEEEECCCEEEECCCCEEECCCCCCCCCCCEEEECCEEECCCCCCCCEEEEEEECC
PVDLTTVKVVGLTPGLIVELDDGDFSVNNTADDNGVALLNVSTRPILGINNPIDLFIYAE
CCCEEEEEEEECCCCEEEEECCCCEEECCCCCCCCEEEEEECCCCEEECCCCEEEEEEEC
NGTLLDYFQINKTISGGTIIVYTPEIRESTESFSAMIHASGNNIGSCTLNRNQYVYLASY
CCCEEEEEEECCEECCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEECCCEEEEEEEC
PSNTGFNIVCKTSWLNWGRYLTSIGYYNGSFYYFIYAVNRELRDSNSIALPANTTPLLFR
CCCCCCEEEEEECCCCHHHHHHEEEEECCEEEEEEEEECCCCCCCCCEEECCCCCHHHEE
VVFGVSLEGKLSGQVNRVNTTGVFEKIWVRPFVYPEPAVSYSVLGIQNISFPKQPTVIVD
EHHCCEECCEECCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEE
EYTGYIVFSSKLMVDIVVTIDNTGRIIIIEVPRGVRAP
CCCCEEEEECCEEEEEEEEECCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MWRCSEVASPIITHVIGTTVMIAIIIALMNYASIVYNTTRYNNLQALYEELSSRIAARIN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCC
GAVMDAYIWRINNTLIQLANPVESAFNEGYNVYVGKGVYLNRVFSRVPPDTSIYVVVSTP
CEEEEEEEEEECCEEEEECCHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECC
DNTIYGYALVGNISNLEVARGSFIVDRYRTGFDAGNSYVENGVPFLCRMPINISERAGVY
CCCEEEEEEEECCCCEEEECCCEEEEHHHCCCCCCCCHHHCCCCEEEECCCCCCCCCCEE
LSDYLVLVNLSYSSVNCTYLGKIYAPSRNDVRFTDSDGVTPLDYYIEYWNDTSKQALIWV
EEEEEEEEEECCCEEEEEEEEEEECCCCCCEEEECCCCCCHHHHHEEECCCCCCCEEEEE
KIPSLSASSSKTIYMYWGNPYAVDKSNPGIFTLIDYLGRYQDLGDLLLEGVWGIKYNNTV
EECCCCCCCCCEEEEECCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEECCCC
GEPSIVGNTTSLMVSTKYTNYGYVNIYSLRPFNLTGRQGWIIEAVGTPVDTSVNSQNYRV
CCCCEECCCEEEEEEEEECCCCEEEEEEEECEECCCCCCEEEEECCCCCCCCCCCCCEEE
GFYMWNTTTSEKYGIQLIPPVIDPSIDLTPYTIIYGGWNITSEITGDEINIVIANTNLSI
EEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECEEEEEECCCCEEEEEEEECCEEE
LPASKSKSNVSIAIAQRSIGSTGEGGYVSILYKVKVAPDNIYRGLVLSNNLVNQSNQAYA
EECCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEE
ILLTADTSGNLQVCTLDVDQLLNNNVEFLECQPTNVDINGEEWFYINVTIRNPAQGQGNP
EEEEECCCCCEEEEEEEHHHHHCCCCEEEEEECCEEEECCCEEEEEEEEECCCCCCCCCC
GMDLYIYRTDGSVVYSKSRVGTVGLPGRPDYIGPIVYYNGVLSSYNGSRFDDLIAIRYSE
CCEEEEEEECCCEEEECCCCEEECCCCCCCCCCCEEEECCEEECCCCCCCCEEEEEEECC
PVDLTTVKVVGLTPGLIVELDDGDFSVNNTADDNGVALLNVSTRPILGINNPIDLFIYAE
CCCEEEEEEEECCCCEEEEECCCCEEECCCCCCCCEEEEEECCCCEEECCCCEEEEEEEC
NGTLLDYFQINKTISGGTIIVYTPEIRESTESFSAMIHASGNNIGSCTLNRNQYVYLASY
CCCEEEEEEECCEECCCEEEEECCCHHHCCCCEEEEEEECCCCEEEEEECCCEEEEEEEC
PSNTGFNIVCKTSWLNWGRYLTSIGYYNGSFYYFIYAVNRELRDSNSIALPANTTPLLFR
CCCCCCEEEEEECCCCHHHHHHEEEEECCEEEEEEEEECCCCCCCCCEEECCCCCHHHEE
VVFGVSLEGKLSGQVNRVNTTGVFEKIWVRPFVYPEPAVSYSVLGIQNISFPKQPTVIVD
EHHCCEECCEECCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEE
EYTGYIVFSSKLMVDIVVTIDNTGRIIIIEVPRGVRAP
CCCCEEEEECCEEEEEEEEECCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA