| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883479
Identifier: 218883479
GI number: 218883479
Start: 153938
End: 154702
Strand: Direct
Name: 218883479
Synonym: DKAM_0165
Alternate gene names: NA
Gene position: 153938-154702 (Clockwise)
Preceding gene: 218883478
Following gene: 218883480
Centisome position: 11.28
GC content: 39.87
Gene sequence:
>765_bases GTGTATGATATGGTTAGAAGCAGTAGAGCTGTAAGCGAAATATTGGCTGGAGTAATATTATTCACAGTGGTAACCCTGAT ATCCCTCGCCATATTCTTTTATGCCATATTCTACGTTGACTACGCTAAGGCTTTAACAGAGTATGGTTATGCAGTATCCA TGTTCAACAATATTGCTGAAGCCATTATCACTAGGTTCACTAACAACACGGCCATGGATTTCACCTATCCTCATGAAGCC GTTTCAATAGGATATAGCTACCGGGATGTAAACCTATCTATAATATTGCGTGATGCAGGAAACAATAGTCTTATATGGTC CCTAAATATAACTAGATGCTATGTCTTAAGGGCTGGTGTACCGAGGCCTGTTGTAACTAGTTCAACCCCTGTGAAGCTAA GGGGTGATAATATTACAGTAGTTAATGATATTAATACTGTTCCATTAATCTACGAATACTATTCCAACGGCTGGAGTATA CTTGTACTGGATTTATGCAGGATATACTACTCTATTAAATCGCTGAACAACACCAGGATGCTGGAGGTATGGTTGTTTAA TCTAACCGGCGTGAATGGTGAGGACATACCTCCCATGGTGACTGGGCAGGGACATATAGTAGTATTGCCTAGAGTAAGGG ATATTGTTTTTAGTAATGTAAAAGCTACGATCACCCCTCTTGATCAAACGGTTACCTCTGGTTTTCCAGCAGTGTTTACA ACAGTTGTCATTCGGTTCGTAAACATAGGGGTTTTAATAGGTTAA
Upstream 100 bases:
>100_bases AAATATCCTCGGGTAGATTGATAGCTGGATTATTCCACGCCATACTACTGACCCTAATAACTCTGGCGGCGATACTGGTT TCACCATTATTCACGGGGTA
Downstream 100 bases:
>100_bases GCATCGGTTTTCCAGCGGTGTTTCCATAACTATATAGGTAGTGACATTAAGATATAAATCATTGGATGAAATATTGGAAA AGTAAGTTGTAAATTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MYDMVRSSRAVSEILAGVILFTVVTLISLAIFFYAIFYVDYAKALTEYGYAVSMFNNIAEAIITRFTNNTAMDFTYPHEA VSIGYSYRDVNLSIILRDAGNNSLIWSLNITRCYVLRAGVPRPVVTSSTPVKLRGDNITVVNDINTVPLIYEYYSNGWSI LVLDLCRIYYSIKSLNNTRMLEVWLFNLTGVNGEDIPPMVTGQGHIVVLPRVRDIVFSNVKATITPLDQTVTSGFPAVFT TVVIRFVNIGVLIG
Sequences:
>Translated_254_residues MYDMVRSSRAVSEILAGVILFTVVTLISLAIFFYAIFYVDYAKALTEYGYAVSMFNNIAEAIITRFTNNTAMDFTYPHEA VSIGYSYRDVNLSIILRDAGNNSLIWSLNITRCYVLRAGVPRPVVTSSTPVKLRGDNITVVNDINTVPLIYEYYSNGWSI LVLDLCRIYYSIKSLNNTRMLEVWLFNLTGVNGEDIPPMVTGQGHIVVLPRVRDIVFSNVKATITPLDQTVTSGFPAVFT TVVIRFVNIGVLIG >Mature_254_residues MYDMVRSSRAVSEILAGVILFTVVTLISLAIFFYAIFYVDYAKALTEYGYAVSMFNNIAEAIITRFTNNTAMDFTYPHEA VSIGYSYRDVNLSIILRDAGNNSLIWSLNITRCYVLRAGVPRPVVTSSTPVKLRGDNITVVNDINTVPLIYEYYSNGWSI LVLDLCRIYYSIKSLNNTRMLEVWLFNLTGVNGEDIPPMVTGQGHIVVLPRVRDIVFSNVKATITPLDQTVTSGFPAVFT TVVIRFVNIGVLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28368; Mature: 28368
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDMVRSSRAVSEILAGVILFTVVTLISLAIFFYAIFYVDYAKALTEYGYAVSMFNNIAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AIITRFTNNTAMDFTYPHEAVSIGYSYRDVNLSIILRDAGNNSLIWSLNITRCYVLRAGV HHHHHHCCCCEEEEECCHHHEEECCEEEEEEEEEEEEECCCCEEEEEEECEEEEEEECCC PRPVVTSSTPVKLRGDNITVVNDINTVPLIYEYYSNGWSILVLDLCRIYYSIKSLNNTRM CCCEECCCCCEEEECCCEEEEECCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEE LEVWLFNLTGVNGEDIPPMVTGQGHIVVLPRVRDIVFSNVKATITPLDQTVTSGFPAVFT EEEEEEEECCCCCCCCCCEEECCCCEEEECCHHHHHHCCCEEEEECCHHHHHCCCHHHHH TVVIRFVNIGVLIG HHHHHHHHHCEEEC >Mature Secondary Structure MYDMVRSSRAVSEILAGVILFTVVTLISLAIFFYAIFYVDYAKALTEYGYAVSMFNNIAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AIITRFTNNTAMDFTYPHEAVSIGYSYRDVNLSIILRDAGNNSLIWSLNITRCYVLRAGV HHHHHHCCCCEEEEECCHHHEEECCEEEEEEEEEEEEECCCCEEEEEEECEEEEEEECCC PRPVVTSSTPVKLRGDNITVVNDINTVPLIYEYYSNGWSILVLDLCRIYYSIKSLNNTRM CCCEECCCCCEEEECCCEEEEECCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEE LEVWLFNLTGVNGEDIPPMVTGQGHIVVLPRVRDIVFSNVKATITPLDQTVTSGFPAVFT EEEEEEEECCCCCCCCCCEEECCCCEEEECCHHHHHHCCCEEEEECCHHHHHCCCHHHHH TVVIRFVNIGVLIG HHHHHHHHHCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA