| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883426
Identifier: 218883426
GI number: 218883426
Start: 98069
End: 98662
Strand: Direct
Name: 218883426
Synonym: DKAM_0112
Alternate gene names: NA
Gene position: 98069-98662 (Clockwise)
Preceding gene: 218883421
Following gene: 218883427
Centisome position: 7.18
GC content: 37.04
Gene sequence:
>594_bases ATGAGAGCCGTTGCAAACCTATTGATAGTCTTCATACTGGGGATGATTATCGGGGCGTCTATAGGTGTGTATGTTTATTC AAGGTATTTCCAAACCGGTGGAAGTGGTTTAATGGTAAATAATACTTGTTCACTCAATCTATTATTGGATAGAGAGTACT ATGACGCAGTATTGAGGACCCTGGGCGGCGCTAATAGAAGTGTATACATAATGATGTATGTCGTGAAATATGATCCAAAT GAGAGGGGCGATCCTGTAAACATTCTACTGGAAACGCTGGAGAAGTTAAAGAATAGAGGCGTAGATGTGAAAATAGTTGT GGATGATGAAACCTATAAATCATATAAAGATACAACGATTCGTTATCTTCTATCAAATAATATACCTGTAAGGCTAGATG AGTCTTCAGCTATAACAACTCATACTAAAATGGTGATTATCGATAATTCCACAGTAATACTTGGTAGCCATAACTGGACT GAGTCGGCTTTAATGAATAACCATGAGGCATCAATAGAGACTAATTGTACAAGTATAGTTTCTAAGGCCCTCTCATATTT TGATAATATATGGGCTGGTTCTAGAAGTATTTAG
Upstream 100 bases:
>100_bases AACCGGTAAAACATTATCAGACCTCCTTTTCTAGTAAGATAAGATTACATCGAATATTTAAAACTTCTAGAGATAGTTAA TAAAGGGATCGGGTGGGCTC
Downstream 100 bases:
>100_bases TGACAAAGATAAGATAAATTTAATAATTATGGTAATGGTATTTGTTAGAAGAAAGTATGGTGGCAGTCTTGAAAACCATG ATTAAGCTTACCATCTATAT
Product: phospholipase D-like protein
Products: NA
Alternate protein names: Phospholipase D-Related Protein
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRAVANLLIVFILGMIIGASIGVYVYSRYFQTGGSGLMVNNTCSLNLLLDREYYDAVLRTLGGANRSVYIMMYVVKYDPN ERGDPVNILLETLEKLKNRGVDVKIVVDDETYKSYKDTTIRYLLSNNIPVRLDESSAITTHTKMVIIDNSTVILGSHNWT ESALMNNHEASIETNCTSIVSKALSYFDNIWAGSRSI
Sequences:
>Translated_197_residues MRAVANLLIVFILGMIIGASIGVYVYSRYFQTGGSGLMVNNTCSLNLLLDREYYDAVLRTLGGANRSVYIMMYVVKYDPN ERGDPVNILLETLEKLKNRGVDVKIVVDDETYKSYKDTTIRYLLSNNIPVRLDESSAITTHTKMVIIDNSTVILGSHNWT ESALMNNHEASIETNCTSIVSKALSYFDNIWAGSRSI >Mature_197_residues MRAVANLLIVFILGMIIGASIGVYVYSRYFQTGGSGLMVNNTCSLNLLLDREYYDAVLRTLGGANRSVYIMMYVVKYDPN ERGDPVNILLETLEKLKNRGVDVKIVVDDETYKSYKDTTIRYLLSNNIPVRLDESSAITTHTKMVIIDNSTVILGSHNWT ESALMNNHEASIETNCTSIVSKALSYFDNIWAGSRSI
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22050; Mature: 22050
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVANLLIVFILGMIIGASIGVYVYSRYFQTGGSGLMVNNTCSLNLLLDREYYDAVLRT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCHHHHHHHHH LGGANRSVYIMMYVVKYDPNERGDPVNILLETLEKLKNRGVDVKIVVDDETYKSYKDTTI HCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHEE RYLLSNNIPVRLDESSAITTHTKMVIIDNSTVILGSHNWTESALMNNHEASIETNCTSIV EEEECCCCCEEECCCCEEEEEEEEEEEECCEEEEECCCCCHHHHHCCCCCCCCCHHHHHH SKALSYFDNIWAGSRSI HHHHHHHHHHCCCCCCC >Mature Secondary Structure MRAVANLLIVFILGMIIGASIGVYVYSRYFQTGGSGLMVNNTCSLNLLLDREYYDAVLRT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCHHHHHHHHH LGGANRSVYIMMYVVKYDPNERGDPVNILLETLEKLKNRGVDVKIVVDDETYKSYKDTTI HCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHEE RYLLSNNIPVRLDESSAITTHTKMVIIDNSTVILGSHNWTESALMNNHEASIETNCTSIV EEEECCCCCEEECCCCEEEEEEEEEEEECCEEEEECCCCCHHHHHCCCCCCCCCHHHHHH SKALSYFDNIWAGSRSI HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA