| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883421
Identifier: 218883421
GI number: 218883421
Start: 92131
End: 93243
Strand: Direct
Name: 218883421
Synonym: DKAM_0107
Alternate gene names: NA
Gene position: 92131-93243 (Clockwise)
Preceding gene: 218883420
Following gene: 218883426
Centisome position: 6.75
GC content: 42.32
Gene sequence:
>1113_bases ATGTTCAATACATACCTAATGGGTCCCGGCGGCTCCGAGTACGTTACACTAGAAACAGCTATAGCTTTTACGGAGAGGGG TTTTCCAGTATATATAGACTCCGTGACACTAAACACCCCATCTAAGCTGAGGGAGCTAGCGGATCACTATGGTTTAAAAC GCCCTGAACTAAGATTAATTGGGATAGGTGATCCAGAGGGGGATCCCTTACTCACCATAAATACCAGTGGCGATATATTG TCCGGGCACAGCGACGTACTCTACCTACATTACCCGTCGTTTCTCAACCATGATATCTACTATCCTGGCTTAAACGGTAT ATTTAATCTAGTTGGGAAAACATATTCACTATTAAACTCGGTGATCTTCCCATTTATGATGAAGAAGATTAAGATATACA TAGCTAACTCTAGTTTTACAGCATCATTCTTCAAGAAATATTATAATATTGACCCATATGTGATCACTCCGCCAGTGAAT ATAGATGACATAGTGAGCGAGCCCTTGTTAGTAAGGAATGAGAGAGAGTACATCGTCTTAAGTGTCACACGTATAAGTCC AGAGAAGCATGTCGAGAACATCCTCTACGTGGCTAGGAAATTCAGTAGAGAGAAAAATAAACCACGCTTCGTCATCGCTG GGGCACTCTCTAAATATAATAGAGATTACTACGATGAACTCCGTGAAAAAGCATTTAAGAAGGGAATAGATGATATAGTC GAGTTCAAAGTAAATATCTCGAGAACGGAGTTAGTGGACTTGTATAGAAAAGCCATGGTATACATGCATCCAACACCTAG AGAACACTTTGGAATATCGATCGTCGAAGCAATGGCAGCTGGGACACCCGTTGTGATACCGATAGACTCAGGTAGCTGGG TGGATATAGCTTTGGGCAATAGGAATATTGCAGCACCATATGGAAACATCGATGAGGCCTTTATTCAGGTAAAGACACTG CTCGAGAATGAGAGGCTATGGGCGTATCTAAGTAAGAGAAGCATTAACCGGGCTAGAGAGCTGGATAGACATGTGTTCCA TGACAAACTATATTATGCTCTAGAACCATTGATACTGAAGCGATGGGGAGGAACCGCGAACCTGAGGAAATGA
Upstream 100 bases:
>100_bases ACTGTGCCATAGTCATGCCAAGCGCGAATCCATTGGAGCAATTAAACAAGTGTAGTGGGGGAACGAGTACTTAATGACTT ATATTCTAATAAGGCATCAC
Downstream 100 bases:
>100_bases TGAAGAAGAGCCGAACCCGACTCGCTTAGTGAAACAGTTAAGGGGTTTCACGGATTAAGTGTTCAAACTAGCATGCTTGA CACAGGCGCTGTGTAAATCT
Product: Glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyltransferase; Glycosyl Transferase Group 1 Protein; Mannosyltransferase; First Mannosyl Transferase
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MFNTYLMGPGGSEYVTLETAIAFTERGFPVYIDSVTLNTPSKLRELADHYGLKRPELRLIGIGDPEGDPLLTINTSGDIL SGHSDVLYLHYPSFLNHDIYYPGLNGIFNLVGKTYSLLNSVIFPFMMKKIKIYIANSSFTASFFKKYYNIDPYVITPPVN IDDIVSEPLLVRNEREYIVLSVTRISPEKHVENILYVARKFSREKNKPRFVIAGALSKYNRDYYDELREKAFKKGIDDIV EFKVNISRTELVDLYRKAMVYMHPTPREHFGISIVEAMAAGTPVVIPIDSGSWVDIALGNRNIAAPYGNIDEAFIQVKTL LENERLWAYLSKRSINRARELDRHVFHDKLYYALEPLILKRWGGTANLRK
Sequences:
>Translated_370_residues MFNTYLMGPGGSEYVTLETAIAFTERGFPVYIDSVTLNTPSKLRELADHYGLKRPELRLIGIGDPEGDPLLTINTSGDIL SGHSDVLYLHYPSFLNHDIYYPGLNGIFNLVGKTYSLLNSVIFPFMMKKIKIYIANSSFTASFFKKYYNIDPYVITPPVN IDDIVSEPLLVRNEREYIVLSVTRISPEKHVENILYVARKFSREKNKPRFVIAGALSKYNRDYYDELREKAFKKGIDDIV EFKVNISRTELVDLYRKAMVYMHPTPREHFGISIVEAMAAGTPVVIPIDSGSWVDIALGNRNIAAPYGNIDEAFIQVKTL LENERLWAYLSKRSINRARELDRHVFHDKLYYALEPLILKRWGGTANLRK >Mature_370_residues MFNTYLMGPGGSEYVTLETAIAFTERGFPVYIDSVTLNTPSKLRELADHYGLKRPELRLIGIGDPEGDPLLTINTSGDIL SGHSDVLYLHYPSFLNHDIYYPGLNGIFNLVGKTYSLLNSVIFPFMMKKIKIYIANSSFTASFFKKYYNIDPYVITPPVN IDDIVSEPLLVRNEREYIVLSVTRISPEKHVENILYVARKFSREKNKPRFVIAGALSKYNRDYYDELREKAFKKGIDDIV EFKVNISRTELVDLYRKAMVYMHPTPREHFGISIVEAMAAGTPVVIPIDSGSWVDIALGNRNIAAPYGNIDEAFIQVKTL LENERLWAYLSKRSINRARELDRHVFHDKLYYALEPLILKRWGGTANLRK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI51889724, Length=199, Percent_Identity=26.6331658291457, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17569999, Length=241, Percent_Identity=26.9709543568465, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42392; Mature: 42392
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNTYLMGPGGSEYVTLETAIAFTERGFPVYIDSVTLNTPSKLRELADHYGLKRPELRLI CCCEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCCEEEE GIGDPEGDPLLTINTSGDILSGHSDVLYLHYPSFLNHDIYYPGLNGIFNLVGKTYSLLNS ECCCCCCCEEEEEECCCCEECCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHH VIFPFMMKKIKIYIANSSFTASFFKKYYNIDPYVITPPVNIDDIVSEPLLVRNEREYIVL HHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHCCCEEEECCCCEEEE SVTRISPEKHVENILYVARKFSREKNKPRFVIAGALSKYNRDYYDELREKAFKKGIDDIV EEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCHHHHHHHHHHHHCCHHHHH EFKVNISRTELVDLYRKAMVYMHPTPREHFGISIVEAMAAGTPVVIPIDSGSWVDIALGN HEEECCCHHHHHHHHHHHEEEECCCCCHHCCHHHHHHHHCCCCEEEEECCCCEEEEEECC RNIAAPYGNIDEAFIQVKTLLENERLWAYLSKRSINRARELDRHVFHDKLYYALEPLILK CEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWGGTANLRK HCCCCCCCCC >Mature Secondary Structure MFNTYLMGPGGSEYVTLETAIAFTERGFPVYIDSVTLNTPSKLRELADHYGLKRPELRLI CCCEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHCCCCCCEEEE GIGDPEGDPLLTINTSGDILSGHSDVLYLHYPSFLNHDIYYPGLNGIFNLVGKTYSLLNS ECCCCCCCEEEEEECCCCEECCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHH VIFPFMMKKIKIYIANSSFTASFFKKYYNIDPYVITPPVNIDDIVSEPLLVRNEREYIVL HHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHCCCEEEECCCCEEEE SVTRISPEKHVENILYVARKFSREKNKPRFVIAGALSKYNRDYYDELREKAFKKGIDDIV EEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCHHHHHHHHHHHHCCHHHHH EFKVNISRTELVDLYRKAMVYMHPTPREHFGISIVEAMAAGTPVVIPIDSGSWVDIALGN HEEECCCHHHHHHHHHHHEEEECCCCCHHCCHHHHHHHHCCCCEEEEECCCCEEEEEECC RNIAAPYGNIDEAFIQVKTLLENERLWAYLSKRSINRARELDRHVFHDKLYYALEPLILK CEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWGGTANLRK HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA