| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is fabI1 [H]
Identifier: 218532547
GI number: 218532547
Start: 4943139
End: 4943966
Strand: Reverse
Name: fabI1 [H]
Synonym: Mchl_4661
Alternate gene names: 218532547
Gene position: 4943966-4943139 (Counterclockwise)
Preceding gene: 218532548
Following gene: 218532543
Centisome position: 85.57
GC content: 65.82
Gene sequence:
>828_bases ATGTCGGAACAGAAGCCGGGCGGGCTGCTCGCGGGCAAGCGCGGGCTGGTGTTGGGAGTGGCCAACAACCGCTCGATCGC CTGGGGTATCGCCCGTAGCGCTGCCGCGCACGGGGCGGAATTGGCGTTCACCTACCAGGGCGAGGCGCTGAAGAAGCGCG TCGAGCCGCTGGCGCGCGAGTTGAACGCGCATGTCGTCGGCCATTGCGACGTCACCGATCCCGCCTCGATCGATTCCGCC TTCGCCGCGACCGCCGAGGTGTTCCCGGACGGGATCGATTTCGTCGTCCACTGCATCGCCTTCTCCGACAAGGACGAGCT GACGGGGCGCTATCTCGAGACCTCGGAGGCGAACTTCACCAAGTCGCTGCTGATCTCGTGCTACTCGTTCACGGCGGTGG CGCAGCGCGCGGAAAAGATCATGCGCAACGGCGGGTCGATGCTGACCCTGACCTATTACGGCGCCGAGAAGTGGATGCCC CACTACAACGTGATGGGTGTCGCCAAGGCCGCGCTGGAAGCCTCCGTACGCTACCTCGCCGCCGATCTCGGGCCGAAGCA GATCCGCGTCAACGCGATCTCGGCCGGGCCGATCAAGACGCTGGCGGCCTCCGGCATCGGCGACTTCCGCTACATTCTCA AGTGGAACGAGTACAACGCGCCGATGCGCCGGACCGTGACCATTGAGGAGGTCGGCGAGACGGCAGCCTACCTGTTCTCC GACATGTCCCGCGGCATGACCGGCGAGATCCTCCACGTCGATGCCGGCTACCACGTCGTCGGCATGAAGAACCCCGACGC GCCGGATATCACCCGCGAGCGGGAATAG
Upstream 100 bases:
>100_bases CGCCTTGAGGCTTCCCCCTCCGGCAACCCTCGGCTAAGGAAGCCCCCGGCGCAGGGCCGTCCCTCAAGAGGCGCCCGCGC GGCCGAAGCGAAGGTGACGC
Downstream 100 bases:
>100_bases GGTTCATCCCTCTTCCCCGAGCCGTCGGCGTCAATCCTCCACGGCGCCGCTCGCGAGCCGGCGGGCGGCGAGCGCCCGCC AGGATTCGGTGAGGGGCGCG
Product: enoyl-acyl carrier protein reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 1 [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSEQKPGGLLAGKRGLVLGVANNRSIAWGIARSAAAHGAELAFTYQGEALKKRVEPLARELNAHVVGHCDVTDPASIDSA FAATAEVFPDGIDFVVHCIAFSDKDELTGRYLETSEANFTKSLLISCYSFTAVAQRAEKIMRNGGSMLTLTYYGAEKWMP HYNVMGVAKAALEASVRYLAADLGPKQIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPMRRTVTIEEVGETAAYLFS DMSRGMTGEILHVDAGYHVVGMKNPDAPDITRERE
Sequences:
>Translated_275_residues MSEQKPGGLLAGKRGLVLGVANNRSIAWGIARSAAAHGAELAFTYQGEALKKRVEPLARELNAHVVGHCDVTDPASIDSA FAATAEVFPDGIDFVVHCIAFSDKDELTGRYLETSEANFTKSLLISCYSFTAVAQRAEKIMRNGGSMLTLTYYGAEKWMP HYNVMGVAKAALEASVRYLAADLGPKQIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPMRRTVTIEEVGETAAYLFS DMSRGMTGEILHVDAGYHVVGMKNPDAPDITRERE >Mature_274_residues SEQKPGGLLAGKRGLVLGVANNRSIAWGIARSAAAHGAELAFTYQGEALKKRVEPLARELNAHVVGHCDVTDPASIDSAF AATAEVFPDGIDFVVHCIAFSDKDELTGRYLETSEANFTKSLLISCYSFTAVAQRAEKIMRNGGSMLTLTYYGAEKWMPH YNVMGVAKAALEASVRYLAADLGPKQIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPMRRTVTIEEVGETAAYLFSD MSRGMTGEILHVDAGYHVVGMKNPDAPDITRERE
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=257, Percent_Identity=51.7509727626459, Blast_Score=257, Evalue=5e-70, Organism=Escherichia coli, GI87082100, Length=265, Percent_Identity=30.9433962264151, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 29823; Mature: 29692
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQKPGGLLAGKRGLVLGVANNRSIAWGIARSAAAHGAELAFTYQGEALKKRVEPLARE CCCCCCCCEEECCCEEEEEECCCCEEEEHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH LNAHVVGHCDVTDPASIDSAFAATAEVFPDGIDFVVHCIAFSDKDELTGRYLETSEANFT CCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCEEECCCCCHH KSLLISCYSFTAVAQRAEKIMRNGGSMLTLTYYGAEKWMPHYNVMGVAKAALEASVRYLA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHH ADLGPKQIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPMRRTVTIEEVGETAAYLFS HCCCCCEEEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHH DMSRGMTGEILHVDAGYHVVGMKNPDAPDITRERE HHHCCCCCEEEEEECCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SEQKPGGLLAGKRGLVLGVANNRSIAWGIARSAAAHGAELAFTYQGEALKKRVEPLARE CCCCCCCEEECCCEEEEEECCCCEEEEHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH LNAHVVGHCDVTDPASIDSAFAATAEVFPDGIDFVVHCIAFSDKDELTGRYLETSEANFT CCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCEEECCCCCHH KSLLISCYSFTAVAQRAEKIMRNGGSMLTLTYYGAEKWMPHYNVMGVAKAALEASVRYLA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHH ADLGPKQIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPMRRTVTIEEVGETAAYLFS HCCCCCEEEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHH DMSRGMTGEILHVDAGYHVVGMKNPDAPDITRERE HHHCCCCCEEEEEECCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]