| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is gpmB [H]
Identifier: 218532543
GI number: 218532543
Start: 4939421
End: 4940017
Strand: Reverse
Name: gpmB [H]
Synonym: Mchl_4657
Alternate gene names: 218532543
Gene position: 4940017-4939421 (Counterclockwise)
Preceding gene: 218532547
Following gene: 218532540
Centisome position: 85.5
GC content: 74.54
Gene sequence:
>597_bases ATGAGCGGGGTGCCGACGATCTGGTTCGTGCGCCATGGCCAGACCGACTGGAATGCGGAGGGGCGCCTTCAGGGCCACCG CGATACCGATCTCAACGCCAACGGGCTCGCCCACGCGGCGGAGGCGGCCGCGCGCCTGCGCCGGATCGCCGGAGCGGAAC TGCCCACCGCCGACTACGTGGCGAGCCCACTCACCCGCACCCGTCGGACGATGGAGATCCTGCGCACCGGCATCGGCCTG CCCGCGGGGGGCTACCGGGCCGATATGCGGCTGCGGGAGATCGGCTTCGGCGCCTGGGAGGGCCGGACCTGGGCCGAGAT CCGGCGGCGCGATCCCGCAGGCGCCGCCGCGCGCGACCGCGATCGCTGGGGCTACCAGCCGCGCGGGGAGGGGGCGGAGA GCTACGCGATGGTCGAGGCGCGGGTGGAAGAGGTGGTGGCGGAGCTACGCCGCCCGACCGTGATGGTCGCCCATGGCGGC GTCGCCCGGGCGCTGCTGGTCGTCGCCGGCCATCTCGACATCTACGCCGCCCCGCGGCTCGGCATCCGCCAGGGCAGCAT TCTCGTCATCGAACCCGGCGGCTGGCGCTGGGCGTGA
Upstream 100 bases:
>100_bases CCCAACAGATGCGCCGCCTTCGCCGTTCCCGATCCGGCGCGTCGGGGTCTTCAAGGGCAAGGTCTTTAAGGGGATGCGCC GGTCGCGTCGGAGCCGCCGC
Downstream 100 bases:
>100_bases CGGGATTCTTTTGGGGGAAGCGCCCGAGGGGCGGTGCGGGCCCCGTCGAACGCTTCCCCTGAACGGGTCGTCCGAGCCCG GTCAGGCCCGTGCGGCGCGG
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSGVPTIWFVRHGQTDWNAEGRLQGHRDTDLNANGLAHAAEAAARLRRIAGAELPTADYVASPLTRTRRTMEILRTGIGL PAGGYRADMRLREIGFGAWEGRTWAEIRRRDPAGAAARDRDRWGYQPRGEGAESYAMVEARVEEVVAELRRPTVMVAHGG VARALLVVAGHLDIYAAPRLGIRQGSILVIEPGGWRWA
Sequences:
>Translated_198_residues MSGVPTIWFVRHGQTDWNAEGRLQGHRDTDLNANGLAHAAEAAARLRRIAGAELPTADYVASPLTRTRRTMEILRTGIGL PAGGYRADMRLREIGFGAWEGRTWAEIRRRDPAGAAARDRDRWGYQPRGEGAESYAMVEARVEEVVAELRRPTVMVAHGG VARALLVVAGHLDIYAAPRLGIRQGSILVIEPGGWRWA >Mature_197_residues SGVPTIWFVRHGQTDWNAEGRLQGHRDTDLNANGLAHAAEAAARLRRIAGAELPTADYVASPLTRTRRTMEILRTGIGLP AGGYRADMRLREIGFGAWEGRTWAEIRRRDPAGAAARDRDRWGYQPRGEGAESYAMVEARVEEVVAELRRPTVMVAHGGV ARALLVVAGHLDIYAAPRLGIRQGSILVIEPGGWRWA
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Homo sapiens, GI64762445, Length=171, Percent_Identity=33.9181286549708, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI64762406, Length=164, Percent_Identity=33.5365853658537, Blast_Score=71, Evalue=5e-13, Organism=Escherichia coli, GI1790856, Length=191, Percent_Identity=32.4607329842932, Blast_Score=69, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322306, Length=191, Percent_Identity=28.2722513089005, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 21769; Mature: 21638
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVPTIWFVRHGQTDWNAEGRLQGHRDTDLNANGLAHAAEAAARLRRIAGAELPTADYV CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH ASPLTRTRRTMEILRTGIGLPAGGYRADMRLREIGFGAWEGRTWAEIRRRDPAGAAARDR HHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCH DRWGYQPRGEGAESYAMVEARVEEVVAELRRPTVMVAHGGVARALLVVAGHLDIYAAPRL HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEECCCC GIRQGSILVIEPGGWRWA CCCCCCEEEECCCCCCCC >Mature Secondary Structure SGVPTIWFVRHGQTDWNAEGRLQGHRDTDLNANGLAHAAEAAARLRRIAGAELPTADYV CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH ASPLTRTRRTMEILRTGIGLPAGGYRADMRLREIGFGAWEGRTWAEIRRRDPAGAAARDR HHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCH DRWGYQPRGEGAESYAMVEARVEEVVAELRRPTVMVAHGGVARALLVVAGHLDIYAAPRL HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEECCCC GIRQGSILVIEPGGWRWA CCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA