Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is fixG [H]

Identifier: 218711009

GI number: 218711009

Start: 3271116

End: 3272534

Strand: Direct

Name: fixG [H]

Synonym: VS_3138

Alternate gene names: 218711009

Gene position: 3271116-3272534 (Clockwise)

Preceding gene: 218711007

Following gene: 218711010

Centisome position: 99.15

GC content: 45.03

Gene sequence:

>1419_bases
ATGAGTCAGGATAAAATCGATATCAAAGATGTGACTCCTAAAACCTTTAACCCAAAAACACATAAAGGTAATGGAGATCG
ATTTAACCCAAGTAACCGAATCTATGTTCGAGAAAGCAAAGGTAAATTCCAACAACTGCGCCGTTATGGCGGTTGGTTCT
TACTTTTACTTTTTGCGCTTATCCCATGGATCCCATTTGGTGAGCGACAAGCGATCTTGCTCGATATCGGCAGCCAACAG
TTCAACTTCTTTGGTACAACCCTATACCCACAAGATCTAACGCTACTCGCCATCCTATTTATGATTGCTGCTTTTGGCTT
ATTCTTCATAACCACCTTCTTAGGGCGAGTCTGGTGTGGCTACCTGTGTCCACAAACCGTCTGGACCTTCATGTACATCT
GGTTCGAAGAGAAACTGGAAGGTGCTGCCAATAAGCGAAGAAAGCAAGACTCAGGCAAACTGACGAGCAATTTAATTCTC
AGAAAAACCATCAAGCACATCGCGTGGTGGTCGATTGCGATTGCGACGGGCTTAACCTTTGTCGGTTACTTCATCCCAAT
CAAAGAGCTGGTGGTTGGCTTCTTTACCTTTAACTCGACTTTCTGGCCGGTGTTTTGGGTATTGTTCTTTGCTGGGTGTA
CTTATGCGAATGCAGGATGGATGCGTTCTATTGTTTGTCTGCACATGTGTCCTTACGCGCGTTTCCAATCTGCAATGTTC
GATAAAGATACCTTCATCGTGGGTTACGACACTGAACGAGGTGAAAGCCGCGGCCCTCGCTCTCGTAAAGCCGATCCAAA
AGAACTTGGTCTAGGCGACTGTATTGACTGTAATTTATGTGTTCAAGTGTGCCCAACGGGTATCGATATTCGTGACGGTC
TGCAATACGAGTGTATTAACTGTGGCGCGTGTATTGATGCTTGTGACAACACCATGGAACGTATGGGTTATGAGAAAGGT
CTGATCAACTACACCACCGAACATAGGCTTGAGGGGCACTCAACCAAGGTGATGCGTCCTAAGCTCTTGGGCTATGGCGT
AATACTGATCGTTATGTTGGGGCTGTTTTTCGCACAAATCGCGAGTGTTGATCCTGCAGGCTTAAGCGTTCTGCGCGATA
GAAACCAACTATTTAGAATCAATAGCCAAGGGCTTGTCGAAAATACTTACAACTTAAAAGTCATCAACAAGACTCAGCAA
GAGCAAGAGTACAAACTTGATGTCAGCGGGCTGCCGGATTCTATCTGGTACGGTAAACAAACCATTACCGTAGACCCAGG
TGAGGTTTTAAACCTTCCTATCAGTTTGGGCGTCGATCCAGAAAAACTGAGCTCACCAGTTTCGACAATTCAGTTTATAC
TCTCGGATAATGAAGAGTTTACGATAAAAGTCGAAAGCCGCTTTATCAAGAAGCTCTGA

Upstream 100 bases:

>100_bases
TGCACCAAGCTCAATTTCTACAGGTTCTCTAAACCATACTTTCAAGTAATGTCGTCATGCCCGAGTTAACCGGGCAAACA
AGCCACAAAAAGGATAGTCC

Downstream 100 bases:

>100_bases
TACCAGTCACCTTAGTGCTAGGTATAACAACCCAATAAATGGAAAAAGGCTCAGTAATGAGCCTTTTTTATTCTATGACG
ATGCAAGCCTTTAACTTTGA

Product: putative nitrogen fixation protein fixG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MSQDKIDIKDVTPKTFNPKTHKGNGDRFNPSNRIYVRESKGKFQQLRRYGGWFLLLLFALIPWIPFGERQAILLDIGSQQ
FNFFGTTLYPQDLTLLAILFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGAANKRRKQDSGKLTSNLIL
RKTIKHIAWWSIAIATGLTFVGYFIPIKELVVGFFTFNSTFWPVFWVLFFAGCTYANAGWMRSIVCLHMCPYARFQSAMF
DKDTFIVGYDTERGESRGPRSRKADPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECINCGACIDACDNTMERMGYEKG
LINYTTEHRLEGHSTKVMRPKLLGYGVILIVMLGLFFAQIASVDPAGLSVLRDRNQLFRINSQGLVENTYNLKVINKTQQ
EQEYKLDVSGLPDSIWYGKQTITVDPGEVLNLPISLGVDPEKLSSPVSTIQFILSDNEEFTIKVESRFIKKL

Sequences:

>Translated_472_residues
MSQDKIDIKDVTPKTFNPKTHKGNGDRFNPSNRIYVRESKGKFQQLRRYGGWFLLLLFALIPWIPFGERQAILLDIGSQQ
FNFFGTTLYPQDLTLLAILFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGAANKRRKQDSGKLTSNLIL
RKTIKHIAWWSIAIATGLTFVGYFIPIKELVVGFFTFNSTFWPVFWVLFFAGCTYANAGWMRSIVCLHMCPYARFQSAMF
DKDTFIVGYDTERGESRGPRSRKADPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECINCGACIDACDNTMERMGYEKG
LINYTTEHRLEGHSTKVMRPKLLGYGVILIVMLGLFFAQIASVDPAGLSVLRDRNQLFRINSQGLVENTYNLKVINKTQQ
EQEYKLDVSGLPDSIWYGKQTITVDPGEVLNLPISLGVDPEKLSSPVSTIQFILSDNEEFTIKVESRFIKKL
>Mature_471_residues
SQDKIDIKDVTPKTFNPKTHKGNGDRFNPSNRIYVRESKGKFQQLRRYGGWFLLLLFALIPWIPFGERQAILLDIGSQQF
NFFGTTLYPQDLTLLAILFMIAAFGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGAANKRRKQDSGKLTSNLILR
KTIKHIAWWSIAIATGLTFVGYFIPIKELVVGFFTFNSTFWPVFWVLFFAGCTYANAGWMRSIVCLHMCPYARFQSAMFD
KDTFIVGYDTERGESRGPRSRKADPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECINCGACIDACDNTMERMGYEKGL
INYTTEHRLEGHSTKVMRPKLLGYGVILIVMLGLFFAQIASVDPAGLSVLRDRNQLFRINSQGLVENTYNLKVINKTQQE
QEYKLDVSGLPDSIWYGKQTITVDPGEVLNLPISLGVDPEKLSSPVSTIQFILSDNEEFTIKVESRFIKKL

Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR012285
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53840; Mature: 53709

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDKIDIKDVTPKTFNPKTHKGNGDRFNPSNRIYVRESKGKFQQLRRYGGWFLLLLFAL
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHH
IPWIPFGERQAILLDIGSQQFNFFGTTLYPQDLTLLAILFMIAAFGLFFITTFLGRVWCG
HCCCCCCCCCEEEEEECCCCEEEEECEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLCPQTVWTFMYIWFEEKLEGAANKRRKQDSGKLTSNLILRKTIKHIAWWSIAIATGLTF
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGYFIPIKELVVGFFTFNSTFWPVFWVLFFAGCTYANAGWMRSIVCLHMCPYARFQSAMF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHC
DKDTFIVGYDTERGESRGPRSRKADPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECIN
CCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEC
CGACIDACDNTMERMGYEKGLINYTTEHRLEGHSTKVMRPKLLGYGVILIVMLGLFFAQI
CCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ASVDPAGLSVLRDRNQLFRINSQGLVENTYNLKVINKTQQEQEYKLDVSGLPDSIWYGKQ
HCCCHHHHHHHHCCCCEEEECCCCCEECCEEEEEECCCCCCHHEEEECCCCCCCHHCCCE
TITVDPGEVLNLPISLGVDPEKLSSPVSTIQFILSDNEEFTIKVESRFIKKL
EEEECCCHHEECCEECCCCHHHHHCHHHHHHHHCCCCCEEEEEEHHHHHHCC
>Mature Secondary Structure 
SQDKIDIKDVTPKTFNPKTHKGNGDRFNPSNRIYVRESKGKFQQLRRYGGWFLLLLFAL
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHH
IPWIPFGERQAILLDIGSQQFNFFGTTLYPQDLTLLAILFMIAAFGLFFITTFLGRVWCG
HCCCCCCCCCEEEEEECCCCEEEEECEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLCPQTVWTFMYIWFEEKLEGAANKRRKQDSGKLTSNLILRKTIKHIAWWSIAIATGLTF
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGYFIPIKELVVGFFTFNSTFWPVFWVLFFAGCTYANAGWMRSIVCLHMCPYARFQSAMF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHC
DKDTFIVGYDTERGESRGPRSRKADPKELGLGDCIDCNLCVQVCPTGIDIRDGLQYECIN
CCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEC
CGACIDACDNTMERMGYEKGLINYTTEHRLEGHSTKVMRPKLLGYGVILIVMLGLFFAQI
CCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ASVDPAGLSVLRDRNQLFRINSQGLVENTYNLKVINKTQQEQEYKLDVSGLPDSIWYGKQ
HCCCHHHHHHHHCCCCEEEECCCCCEECCEEEEEECCCCCCHHEEEECCCCCCCHHCCCE
TITVDPGEVLNLPISLGVDPEKLSSPVSTIQFILSDNEEFTIKVESRFIKKL
EEEECCCHHEECCEECCCCHHHHHCHHHHHHHHCCCCCEEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2536685; 11481432 [H]