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The map label for this gene is rdoA [H]

Identifier: 218711010

GI number: 218711010

Start: 3272609

End: 3273595

Strand: Direct

Name: rdoA [H]

Synonym: VS_3139

Alternate gene names: 218711010

Gene position: 3272609-3273595 (Clockwise)

Preceding gene: 218711009

Following gene: 218711011

Centisome position: 99.19

GC content: 46.4

Gene sequence:

>987_bases
ATGACGATGCAAGCCTTTAACTTTGATAACCTGACTCCTGACTTCATGTGGTACGCACTGGAGAGTATTGGAGTCCGTGC
TGAATCCGGGCTTCTCGCCCTCAACAGTTACGAAAATCGAGTGTATCAATTCACCGATGAAGACCGTAAACGCTACGTCG
TTAAGTTTTATCGTCCGCAGCGTTGGAACAAAGCACAGATCCAAGAAGAGCATGACTTCGCACTCGAGCTTATCGAACAA
GAGATGCCAGTTGCACCTCCAATGCGAATCAATGGTGCAACCTTACATGAATATCAAGGCTACCTATTTGCCTTATTTGA
AAGTGTTGGTGGCAGACAGTACGAAGTCGACAATCTAGACCAATTGGAAGGCGTTGGGCGTTTTCTTGGGCGTATTCATA
AAGCCAGCGCAGGAAGAACATTCCAGCATCGCCCGACCATCAGCTTAGACGAATACCTTTATCAACCACGTAAAATTCTA
GAGAACTCTCAGTTTATCCCGACACACCTAGAGAACGCGTTCTTTAATGATGTAGACCTTCTGATCAAAGAGCTAGAGAG
CCAGTGGCCAAGCAATATTGAAAATATCCGCCTGCATGGTGACTGCCACCCTGGCAATATCTTGTGGCGCGACGGGCCAA
TGTTCGTCGATCTTGATGACGCACGTAACGGCCCTGCGATACAAGATTTGTGGATGCTGCTTAACGGCGAGCGTCAAGAT
AAGCTAATGCAACTGGATATTCTGCTAGAAAGCTATCAAGAATTTTGCGATTTTAATACCGCGCAACTGAAACTAATCGA
GCCACTACGCGGTCTACGTATGGTGCATTACATGGCATGGTTGGCGAAACGATGGAACGATCCTGCATTTCCTCTAGCCT
TCCCATGGTTTAATGATCCAAAATATTGGGAGCAACAAGTACTTGCTTGTAAAGAGCAAATTGCTACCCTGCAAGAGCCA
CCACTTTCGTTAATGCCTCAGTGGTAA

Upstream 100 bases:

>100_bases
AAAGCCGCTTTATCAAGAAGCTCTGATACCAGTCACCTTAGTGCTAGGTATAACAACCCAATAAATGGAAAAAGGCTCAG
TAATGAGCCTTTTTTATTCT

Downstream 100 bases:

>100_bases
CAGCAATCGCAACACAACTAGATAAAAATTCAAACATAATGGAGATTGGATAAATGAAAAAGCTATTCGCATTTTTCTCA
TTGATCATGTTGAGCCTTTC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTMQAFNFDNLTPDFMWYALESIGVRAESGLLALNSYENRVYQFTDEDRKRYVVKFYRPQRWNKAQIQEEHDFALELIEQ
EMPVAPPMRINGATLHEYQGYLFALFESVGGRQYEVDNLDQLEGVGRFLGRIHKASAGRTFQHRPTISLDEYLYQPRKIL
ENSQFIPTHLENAFFNDVDLLIKELESQWPSNIENIRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGERQD
KLMQLDILLESYQEFCDFNTAQLKLIEPLRGLRMVHYMAWLAKRWNDPAFPLAFPWFNDPKYWEQQVLACKEQIATLQEP
PLSLMPQW

Sequences:

>Translated_328_residues
MTMQAFNFDNLTPDFMWYALESIGVRAESGLLALNSYENRVYQFTDEDRKRYVVKFYRPQRWNKAQIQEEHDFALELIEQ
EMPVAPPMRINGATLHEYQGYLFALFESVGGRQYEVDNLDQLEGVGRFLGRIHKASAGRTFQHRPTISLDEYLYQPRKIL
ENSQFIPTHLENAFFNDVDLLIKELESQWPSNIENIRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGERQD
KLMQLDILLESYQEFCDFNTAQLKLIEPLRGLRMVHYMAWLAKRWNDPAFPLAFPWFNDPKYWEQQVLACKEQIATLQEP
PLSLMPQW
>Mature_327_residues
TMQAFNFDNLTPDFMWYALESIGVRAESGLLALNSYENRVYQFTDEDRKRYVVKFYRPQRWNKAQIQEEHDFALELIEQE
MPVAPPMRINGATLHEYQGYLFALFESVGGRQYEVDNLDQLEGVGRFLGRIHKASAGRTFQHRPTISLDEYLYQPRKILE
NSQFIPTHLENAFFNDVDLLIKELESQWPSNIENIRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGERQDK
LMQLDILLESYQEFCDFNTAQLKLIEPLRGLRMVHYMAWLAKRWNDPAFPLAFPWFNDPKYWEQQVLACKEQIATLQEPP
LSLMPQW

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=57.0121951219512, Blast_Score=408, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38698; Mature: 38567

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMQAFNFDNLTPDFMWYALESIGVRAESGLLALNSYENRVYQFTDEDRKRYVVKFYRPQ
CCCEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCC
RWNKAQIQEEHDFALELIEQEMPVAPPMRINGATLHEYQGYLFALFESVGGRQYEVDNLD
CCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCHH
QLEGVGRFLGRIHKASAGRTFQHRPTISLDEYLYQPRKILENSQFIPTHLENAFFNDVDL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LIKELESQWPSNIENIRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGERQD
HHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCCHH
KLMQLDILLESYQEFCDFNTAQLKLIEPLRGLRMVHYMAWLAKRWNDPAFPLAFPWFNDP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCH
KYWEQQVLACKEQIATLQEPPLSLMPQW
HHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TMQAFNFDNLTPDFMWYALESIGVRAESGLLALNSYENRVYQFTDEDRKRYVVKFYRPQ
CCEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCC
RWNKAQIQEEHDFALELIEQEMPVAPPMRINGATLHEYQGYLFALFESVGGRQYEVDNLD
CCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCHH
QLEGVGRFLGRIHKASAGRTFQHRPTISLDEYLYQPRKILENSQFIPTHLENAFFNDVDL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LIKELESQWPSNIENIRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGERQD
HHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCCHH
KLMQLDILLESYQEFCDFNTAQLKLIEPLRGLRMVHYMAWLAKRWNDPAFPLAFPWFNDP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCH
KYWEQQVLACKEQIATLQEPPLSLMPQW
HHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]