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The map label for this gene is yihD [H]

Identifier: 218711007

GI number: 218711007

Start: 3270526

End: 3270789

Strand: Direct

Name: yihD [H]

Synonym: VS_3136

Alternate gene names: 218711007

Gene position: 3270526-3270789 (Clockwise)

Preceding gene: 218711006

Following gene: 218711009

Centisome position: 99.13

GC content: 40.91

Gene sequence:

>264_bases
ATGAAGTGTCACCGCATTGAAGAACTGCTTGAACTGATGGAGCCTGAGTGGCAGAAAGATCAAGAGCTTAACCTGTTAGA
GTTCATCATTAAGCTATCAAAAGAAGCGGGCTATCAAGGTAAGCTTGAAGAGCTCACTGACGATGTTCTTATCTACCATC
TAAAAATGCGTAATAGCGAAAAAGATGAAATGATCCCAGGCCTTAAAAAAGACCAAGAAGATGATTTCAAAACCGCAATT
CTAAAAGCGCGTGGCCTTCTTTAG

Upstream 100 bases:

>100_bases
TTGCCCGCTCCCATCTTGAAATGTGTTTACACATTGGTATTCCCTACCCGATTTGATACCTTAGCCACAAATCATTATAA
AATTTGTGGAGAAATAAAGT

Downstream 100 bases:

>100_bases
TCGCCTATTTATTTAGAACTCAATTGCCGTATAGATAAAACACTCAATGTTTAAAAGCGACCACTCGGTCGCTTTTTTGT
TTCTGTTCGCTATTTTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKCHRIEELLELMEPEWQKDQELNLLEFIIKLSKEAGYQGKLEELTDDVLIYHLKMRNSEKDEMIPGLKKDQEDDFKTAI
LKARGLL

Sequences:

>Translated_87_residues
MKCHRIEELLELMEPEWQKDQELNLLEFIIKLSKEAGYQGKLEELTDDVLIYHLKMRNSEKDEMIPGLKKDQEDDFKTAI
LKARGLL
>Mature_87_residues
MKCHRIEELLELMEPEWQKDQELNLLEFIIKLSKEAGYQGKLEELTDDVLIYHLKMRNSEKDEMIPGLKKDQEDDFKTAI
LKARGLL

Specific function: Unknown

COG id: COG3084

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0845 [H]

Homologues:

Organism=Escherichia coli, GI1790289, Length=87, Percent_Identity=62.0689655172414, Blast_Score=123, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009383
- ProDom:   PD029038 [H]

Pfam domain/function: PF06288 DUF1040 [H]

EC number: NA

Molecular weight: Translated: 10318; Mature: 10318

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCHRIEELLELMEPEWQKDQELNLLEFIIKLSKEAGYQGKLEELTDDVLIYHLKMRNSE
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
KDEMIPGLKKDQEDDFKTAILKARGLL
CHHHCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKCHRIEELLELMEPEWQKDQELNLLEFIIKLSKEAGYQGKLEELTDDVLIYHLKMRNSE
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
KDEMIPGLKKDQEDDFKTAILKARGLL
CHHHCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]