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The map label for this gene is smg

Identifier: 218710995

GI number: 218710995

Start: 3258989

End: 3259465

Strand: Reverse

Name: smg

Synonym: VS_3123

Alternate gene names: 218710995

Gene position: 3259465-3258989 (Counterclockwise)

Preceding gene: 218710996

Following gene: 218710994

Centisome position: 98.79

GC content: 41.3

Gene sequence:

>477_bases
ATGATGATGGACATACTGATGTACTTGTTTGAAACCTACATCCATAGCGATTCAGAATTGCAGGTGGATCAAGATGAGCT
GGAAGATGAGCTTCTTCGAGCAGGGTTTCACCAAGATGATATTTATAAGGCCCTCCATTGGTTAGAAGATCTTGCGGCAT
TGCAAGATACTGAGAATCAAGCGGCGATTACTATGTGTTCCAATACCTCGATGCGTATTTATACCAGTCGAGAGATTTCA
CGTATTAATATGGAGTGCCGAGGTTTCTTATTGTTCCTTGAACAGATCAATGTACTCACGACAGAGATTCGTGAAATGGT
GATTGATCGTGTGATGGGGCTTGAGACGAGCGAATTTGAATTGGATGATCTGAAATGGATTATCTTAATGGTGCTATTCA
ATGTACCGGGTAATGAAAGTGCTTACACGCAAATGGAAGAGCTGTTGTACACCAAAGAGCAAGGTATCTTGCATTAA

Upstream 100 bases:

>100_bases
TACCTGTGCATGAGGTCATGATGCAGCTTTTAGAGCTTGAGCTCTCAGGGCATGTTGTTGCAGTTTCCGGTGGCTATATT
CGAAAGGGGAGAGGCTAGCT

Downstream 100 bases:

>100_bases
TACAGGCTTGTCATGAGTAGTAAGATTGATAATCAGCTTTTTTCAGCACATGAACATGCACTAGAGCATGAACCATGTCC
ACAGTGTGGTGGAGAGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MMMDILMYLFETYIHSDSELQVDQDELEDELLRAGFHQDDIYKALHWLEDLAALQDTENQAAITMCSNTSMRIYTSREIS
RINMECRGFLLFLEQINVLTTEIREMVIDRVMGLETSEFELDDLKWIILMVLFNVPGNESAYTQMEELLYTKEQGILH

Sequences:

>Translated_158_residues
MMMDILMYLFETYIHSDSELQVDQDELEDELLRAGFHQDDIYKALHWLEDLAALQDTENQAAITMCSNTSMRIYTSREIS
RINMECRGFLLFLEQINVLTTEIREMVIDRVMGLETSEFELDDLKWIILMVLFNVPGNESAYTQMEELLYTKEQGILH
>Mature_158_residues
MMMDILMYLFETYIHSDSELQVDQDELEDELLRAGFHQDDIYKALHWLEDLAALQDTENQAAITMCSNTSMRIYTSREIS
RINMECRGFLLFLEQINVLTTEIREMVIDRVMGLETSEFELDDLKWIILMVLFNVPGNESAYTQMEELLYTKEQGILH

Specific function: Unknown

COG id: COG2922

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smg family

Homologues:

Organism=Escherichia coli, GI1789679, Length=157, Percent_Identity=60.5095541401274, Blast_Score=194, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMG_VIBSL (B7VMW8)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002418616.1
- GeneID:   7162562
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_3123
- HOGENOM:   HBG518884
- OMA:   EMRVDQD
- ProtClustDB:   PRK03430
- HAMAP:   MF_00598
- InterPro:   IPR007456

Pfam domain/function: PF04361 DUF494

EC number: NA

Molecular weight: Translated: 18616; Mature: 18616

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMDILMYLFETYIHSDSELQVDQDELEDELLRAGFHQDDIYKALHWLEDLAALQDTENQ
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
AAITMCSNTSMRIYTSREISRINMECRGFLLFLEQINVLTTEIREMVIDRVMGLETSEFE
EEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LDDLKWIILMVLFNVPGNESAYTQMEELLYTKEQGILH
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMMDILMYLFETYIHSDSELQVDQDELEDELLRAGFHQDDIYKALHWLEDLAALQDTENQ
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
AAITMCSNTSMRIYTSREISRINMECRGFLLFLEQINVLTTEIREMVIDRVMGLETSEFE
EEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LDDLKWIILMVLFNVPGNESAYTQMEELLYTKEQGILH
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA