| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is murB [H]
Identifier: 218710890
GI number: 218710890
Start: 3136702
End: 3137760
Strand: Reverse
Name: murB [H]
Synonym: VS_2980
Alternate gene names: 218710890
Gene position: 3137760-3136702 (Counterclockwise)
Preceding gene: 218710895
Following gene: 218710889
Centisome position: 95.1
GC content: 43.34
Gene sequence:
>1059_bases TTGAATATCGCCATGCAATTCCATCTCAATGCTAGTTTAAAAAATGTTCATACTTTTTCCATAGATCAGACGTGTGATAC GTTAGTTGAAGTCACCACTATCGAAGAATTAATTTCCGTTTACAGAGACCCTAAATGGTCAGCTTTACCTAAGTTAATAC TGGGTAAAGGCAGTAATATGCTTTTTACTGAGCACTTCGCTGGTCTAGTCATAGTGAATAAATTATCCGGGATTGAGTTG ACCGAGACGGACAGTCATCACCTACTGCATGTTAGTGGGGGGGAAGATTGGCCAAACTTAGTTGAATGGAGTGTGGATAA AGGGCTCGGTGGTCTAGAAAACCTAGCAATGATACCTGGCTGTTCAGGTTCGGCTCCGATTCAAAATATTGGTGCGTATG GTGTTGAGCTACAAGACGTATGCGAGTATGTCGATATCCTGTGTCTGGATACTTATACAGTTAAGCGATTGAGCAAAGAA GAGTGTCTCTTTGGTTACCGAGATTCTATTTTCAAGCACGCTCTCTACGATAAAGCGATTGTTGTTGCGATTGGTTTAAC GTTGCCGAAAGAGTGGGAGCCATGCAATCACTATGGCCCGTTAAAAAGCCTAGCAGCCGATACGCTCTCTCCTCGTACTA TATTTGATGAAGTATGCATTATCCGTTCAAGTAAGTTGCCAGACCCTAGAGTCCAAGGTAATGCGGGCAGCTTCTTCAAA AACCCTGTGATCACCAAAGATCATTTTGATCGCCTGTTCGCTCTATACCCAAACATTGTAGGCTATGAGAGCAATGACAT GATCAAAGTCGCTGCAGGCTGGTTGATTGATCAATGCCAGTTCAAAGGCGTGACAGAAGGCGGCGCTCAAGTTCACCCAA ACCAAGCATTAGTTATCATCAATTATGATAAGGCTTCTGCTGTGGATATCCTTAAGCTTGCAGAGCGAGTACGTCAGTCT GTCTTGAATAAATTCGATATTCGACTGGAACATGAAGTACGTTTTATGGGACGAGACTGCGAGACAAACCTAGACAAGGC TTTGGAGTCATTGGCATGA
Upstream 100 bases:
>100_bases AGGGAACCTTTACTGGGTCTAATTGGGTAATGATGACATTGTTCATTCAGTCACTGCGCCATTGGTTTATCTGCTGTAGA ATGACTGCAGTGTAAGTTAA
Downstream 100 bases:
>100_bases GAGAACACAGTACCAAGCTTGCACTATTGAGATGTCTTGCTGACGGTGAGTTTCATTCAGGTGAAGCTCTAGGTGAAATG ATTGGTGTATCACGAGCGGC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MNIAMQFHLNASLKNVHTFSIDQTCDTLVEVTTIEELISVYRDPKWSALPKLILGKGSNMLFTEHFAGLVIVNKLSGIEL TETDSHHLLHVSGGEDWPNLVEWSVDKGLGGLENLAMIPGCSGSAPIQNIGAYGVELQDVCEYVDILCLDTYTVKRLSKE ECLFGYRDSIFKHALYDKAIVVAIGLTLPKEWEPCNHYGPLKSLAADTLSPRTIFDEVCIIRSSKLPDPRVQGNAGSFFK NPVITKDHFDRLFALYPNIVGYESNDMIKVAAGWLIDQCQFKGVTEGGAQVHPNQALVIINYDKASAVDILKLAERVRQS VLNKFDIRLEHEVRFMGRDCETNLDKALESLA
Sequences:
>Translated_352_residues MNIAMQFHLNASLKNVHTFSIDQTCDTLVEVTTIEELISVYRDPKWSALPKLILGKGSNMLFTEHFAGLVIVNKLSGIEL TETDSHHLLHVSGGEDWPNLVEWSVDKGLGGLENLAMIPGCSGSAPIQNIGAYGVELQDVCEYVDILCLDTYTVKRLSKE ECLFGYRDSIFKHALYDKAIVVAIGLTLPKEWEPCNHYGPLKSLAADTLSPRTIFDEVCIIRSSKLPDPRVQGNAGSFFK NPVITKDHFDRLFALYPNIVGYESNDMIKVAAGWLIDQCQFKGVTEGGAQVHPNQALVIINYDKASAVDILKLAERVRQS VLNKFDIRLEHEVRFMGRDCETNLDKALESLA >Mature_352_residues MNIAMQFHLNASLKNVHTFSIDQTCDTLVEVTTIEELISVYRDPKWSALPKLILGKGSNMLFTEHFAGLVIVNKLSGIEL TETDSHHLLHVSGGEDWPNLVEWSVDKGLGGLENLAMIPGCSGSAPIQNIGAYGVELQDVCEYVDILCLDTYTVKRLSKE ECLFGYRDSIFKHALYDKAIVVAIGLTLPKEWEPCNHYGPLKSLAADTLSPRTIFDEVCIIRSSKLPDPRVQGNAGSFFK NPVITKDHFDRLFALYPNIVGYESNDMIKVAAGWLIDQCQFKGVTEGGAQVHPNQALVIINYDKASAVDILKLAERVRQS VLNKFDIRLEHEVRFMGRDCETNLDKALESLA
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790407, Length=345, Percent_Identity=49.2753623188406, Blast_Score=342, Evalue=3e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 39198; Mature: 39198
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIAMQFHLNASLKNVHTFSIDQTCDTLVEVTTIEELISVYRDPKWSALPKLILGKGSNM CCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCCCE LFTEHFAGLVIVNKLSGIELTETDSHHLLHVSGGEDWPNLVEWSVDKGLGGLENLAMIPG EEHHHCCCEEEEECCCCCEEEECCCCEEEEECCCCCCCHHHHEEHHCCCCCHHHEEECCC CSGSAPIQNIGAYGVELQDVCEYVDILCLDTYTVKRLSKEECLFGYRDSIFKHALYDKAI CCCCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCEE VVAIGLTLPKEWEPCNHYGPLKSLAADTLSPRTIFDEVCIIRSSKLPDPRVQGNAGSFFK EEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NPVITKDHFDRLFALYPNIVGYESNDMIKVAAGWLIDQCQFKGVTEGGAQVHPNQALVII CCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCEECCCCEEEEE NYDKASAVDILKLAERVRQSVLNKFDIRLEHEVRFMGRDCETNLDKALESLA ECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHCC >Mature Secondary Structure MNIAMQFHLNASLKNVHTFSIDQTCDTLVEVTTIEELISVYRDPKWSALPKLILGKGSNM CCEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCCCE LFTEHFAGLVIVNKLSGIELTETDSHHLLHVSGGEDWPNLVEWSVDKGLGGLENLAMIPG EEHHHCCCEEEEECCCCCEEEECCCCEEEEECCCCCCCHHHHEEHHCCCCCHHHEEECCC CSGSAPIQNIGAYGVELQDVCEYVDILCLDTYTVKRLSKEECLFGYRDSIFKHALYDKAI CCCCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCEE VVAIGLTLPKEWEPCNHYGPLKSLAADTLSPRTIFDEVCIIRSSKLPDPRVQGNAGSFFK EEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NPVITKDHFDRLFALYPNIVGYESNDMIKVAAGWLIDQCQFKGVTEGGAQVHPNQALVII CCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCEECCCCEEEEE NYDKASAVDILKLAERVRQSVLNKFDIRLEHEVRFMGRDCETNLDKALESLA ECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]