Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218710850

Identifier: 218710850

GI number: 218710850

Start: 3088676

End: 3088942

Strand: Direct

Name: 218710850

Synonym: VS_2934

Alternate gene names: NA

Gene position: 3088676-3088942 (Clockwise)

Preceding gene: 218710848

Following gene: 218710851

Centisome position: 93.62

GC content: 41.95

Gene sequence:

>267_bases
ATGGCGTTCGAATCTACGGAACATGCTCAAGCCTACTGGAAGGAAAACTTGGGAATAATGGGAACACTACTCGCTGTCTG
GTTTGTGGTGTCTTATGGCGCTGGCATCTTATTTGTGGATGTCCTAAATACCATTCAATTTGGCGGGTTTAAGCTAGGTT
TTTGGTTCGCTCAACAAGGTTCAATTTATACCTTCGTGGCGTTGATATTTATTTACGTTGTTCGCATGAATAAGCTGGAC
AAAAAATACAACGTACAGGAAGACTAG

Upstream 100 bases:

>100_bases
CCTTGCTACATTCTAAATCGTAACATTACGTTAACACGCTATTTTACAAAAACGGTTTCACAAAACGGTTTCTACGAAAA
CGGAATTAAAGGAGAAGGCA

Downstream 100 bases:

>100_bases
AGGCTAGAACATGGATATTCAAACTTGGACGTTTATTCTCGTCGGTATTACTTTCGCAGTCTATATCGGCATCGCAATCT
GGGCTCGCGCTGGAACAACG

Product: hypothetical protein

Products: NA

Alternate protein names: Maf-Like Protein

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MAFESTEHAQAYWKENLGIMGTLLAVWFVVSYGAGILFVDVLNTIQFGGFKLGFWFAQQGSIYTFVALIFIYVVRMNKLD
KKYNVQED

Sequences:

>Translated_88_residues
MAFESTEHAQAYWKENLGIMGTLLAVWFVVSYGAGILFVDVLNTIQFGGFKLGFWFAQQGSIYTFVALIFIYVVRMNKLD
KKYNVQED
>Mature_87_residues
AFESTEHAQAYWKENLGIMGTLLAVWFVVSYGAGILFVDVLNTIQFGGFKLGFWFAQQGSIYTFVALIFIYVVRMNKLDK
KYNVQED

Specific function: Unknown

COG id: COG4327

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10100; Mature: 9969

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFESTEHAQAYWKENLGIMGTLLAVWFVVSYGAGILFVDVLNTIQFGGFKLGFWFAQQG
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEECCC
SIYTFVALIFIYVVRMNKLDKKYNVQED
CHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AFESTEHAQAYWKENLGIMGTLLAVWFVVSYGAGILFVDVLNTIQFGGFKLGFWFAQQG
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEECCC
SIYTFVALIFIYVVRMNKLDKKYNVQED
CHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA