Click here to switch to the map view.

The map label for this gene is yjcG [C]

Identifier: 218710851

GI number: 218710851

Start: 3088953

End: 3090656

Strand: Direct

Name: yjcG [C]

Synonym: VS_2935

Alternate gene names: 218710851

Gene position: 3088953-3090656 (Clockwise)

Preceding gene: 218710850

Following gene: 218710852

Centisome position: 93.62

GC content: 47.89

Gene sequence:

>1704_bases
ATGGATATTCAAACTTGGACGTTTATTCTCGTCGGTATTACTTTCGCAGTCTATATCGGCATCGCAATCTGGGCTCGCGC
TGGAACAACGAGTGAATTCTACGTTGCTGGCGGCGGCGTACACCCAGTAGCAAACGGCATGGCAACAGCCGCTGACTGGA
TGTCGGCAGCATCATTCATCTCAATGGCTGGTATCATCTCATTCGTTGGTTACGACGGTGCGGTTTACCTAATGGGTTGG
ACAGGTGGTTATGTACTACTTGCGCTATGTTTAGCACCTTACCTACGTAAGTTCGGTCAGTTTACGGTTCCTGATTTCAT
CGGTGAACGTTACTACTCGAAAACAGCACGTATGGTAGCGGTATTCTGTGCAATCTTCGTATCATTTACGTACGTTGCAG
GCCAGATGCGTGGTGTTGGCGTTGTATTCTCTCGTTTCCTAGAAGTTGATATTAACCTAGGCATCATCATTGGTATGGGT
ATTGTGTTCTTCTACGCAGTGCTTGGTGGCATGAAAGGCATCACTTATACGCAGGTAGCTCAATTCTGTGTCCTCATTTT
CGCCTTCCTTGTTCCAGCAATCTTTACCTCAATCATGATGACAGGTAACCCACTTCCACAAGTTGGTATGGGCTCAACGC
TATCAGGTACAGATGTATACTTACTTGATAAACTGGATGGACTAACCGAAGAGCTCGGATTTACCGCCTATACCGAAGGT
AACAAGAGCATGGTAGATGTATTCTTCATCTGTGCAGCTCTAATGGTAGGTACTGCCGGTCTTCCACACGTAATCATTCG
TTTCTTCACGGTACCAAAAGTACGTGATGCTCGTATCTCAGCGGGTTGGGCACTACTGTTCATCTCATTGCTATACACAA
CAGCGCCAGGCGTTGCAGCCTTCGCTCGTGTAAACATGATCGAAACGATTAACGGCCCAGACATGCAAGGTGTCGCAGCA
GCAGAAGCACCAAGCTGGTACAAAAACTGGGAAAGCACTGGCCTAGTTGGTTGGGAAGATAAGAACGGCGATGGCAAAAT
GTTCTACTCGGGCGATGAACGCAACGAGATGAAGATTAACCGTGACATCATCGTACTGGCCTCTCCAGAGCTAGCAAAAC
TACCAAACTGGGTTGTCGCACTGCTTGCAGCCGGTGGCTTAGCCGCAGCACTATCAACAGCCGCAGGCCTGCTATTGGTA
ATCTCAACGTCTATTTCACATGACTTGTTGAAGAAAGGCTTTAGACCAAACATGACCGACAAGCAGGAGCTGTTAGCCGC
TCGTTTAGCTGCCATGATCGCGATTGTAGGTGCAGGTTACTTGGGTATTAACCCGCCAGGCTTCGTAGCTCAGGTAGTAG
CGTTTGCCTTCGGCTTAGCCGCAGCATCCTTCTTCCCTGCCATCATCCTAGGTATCTTCTACAAGAAGATGAACAAGGAA
GGCGCAATTGCAGGTATGTTGTCAGGTATTGCCTTCACAGCAAGCTACATCATCTACTTCAAGTTCATTAACCCAGCAGC
AAGCACACCGGAAAACTGGTGGTTTGGTATCAGCCCAGAAGGCATCGGTACGCTAGGTATGTGTCTAAACTTCGTAGTAT
CAATTGCTGTAAACAAAGTAACTGCTGAAGTGCCACAAGATGTACAAGAGATGGTTGAGAACATCCGTTACCCGAAAGGT
GCTGGTGAAGCTCACGACCACTAA

Upstream 100 bases:

>100_bases
GGTTCAATTTATACCTTCGTGGCGTTGATATTTATTTACGTTGTTCGCATGAATAAGCTGGACAAAAAATACAACGTACA
GGAAGACTAGAGGCTAGAAC

Downstream 100 bases:

>100_bases
GCACGACCACGAAACAAAGATGTTTAGCAAAAAATAATCAGTACTTACATTGTAGGGATTAGGTACTGACTCCAGAAAGC
CGATACTTATGTATCGGCTT

Product: sodium/solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MDIQTWTFILVGITFAVYIGIAIWARAGTTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGIISFVGYDGAVYLMGW
TGGYVLLALCLAPYLRKFGQFTVPDFIGERYYSKTARMVAVFCAIFVSFTYVAGQMRGVGVVFSRFLEVDINLGIIIGMG
IVFFYAVLGGMKGITYTQVAQFCVLIFAFLVPAIFTSIMMTGNPLPQVGMGSTLSGTDVYLLDKLDGLTEELGFTAYTEG
NKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVRDARISAGWALLFISLLYTTAPGVAAFARVNMIETINGPDMQGVAA
AEAPSWYKNWESTGLVGWEDKNGDGKMFYSGDERNEMKINRDIIVLASPELAKLPNWVVALLAAGGLAAALSTAAGLLLV
ISTSISHDLLKKGFRPNMTDKQELLAARLAAMIAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYKKMNKE
GAIAGMLSGIAFTASYIIYFKFINPAASTPENWWFGISPEGIGTLGMCLNFVVSIAVNKVTAEVPQDVQEMVENIRYPKG
AGEAHDH

Sequences:

>Translated_567_residues
MDIQTWTFILVGITFAVYIGIAIWARAGTTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGIISFVGYDGAVYLMGW
TGGYVLLALCLAPYLRKFGQFTVPDFIGERYYSKTARMVAVFCAIFVSFTYVAGQMRGVGVVFSRFLEVDINLGIIIGMG
IVFFYAVLGGMKGITYTQVAQFCVLIFAFLVPAIFTSIMMTGNPLPQVGMGSTLSGTDVYLLDKLDGLTEELGFTAYTEG
NKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVRDARISAGWALLFISLLYTTAPGVAAFARVNMIETINGPDMQGVAA
AEAPSWYKNWESTGLVGWEDKNGDGKMFYSGDERNEMKINRDIIVLASPELAKLPNWVVALLAAGGLAAALSTAAGLLLV
ISTSISHDLLKKGFRPNMTDKQELLAARLAAMIAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYKKMNKE
GAIAGMLSGIAFTASYIIYFKFINPAASTPENWWFGISPEGIGTLGMCLNFVVSIAVNKVTAEVPQDVQEMVENIRYPKG
AGEAHDH
>Mature_567_residues
MDIQTWTFILVGITFAVYIGIAIWARAGTTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGIISFVGYDGAVYLMGW
TGGYVLLALCLAPYLRKFGQFTVPDFIGERYYSKTARMVAVFCAIFVSFTYVAGQMRGVGVVFSRFLEVDINLGIIIGMG
IVFFYAVLGGMKGITYTQVAQFCVLIFAFLVPAIFTSIMMTGNPLPQVGMGSTLSGTDVYLLDKLDGLTEELGFTAYTEG
NKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVRDARISAGWALLFISLLYTTAPGVAAFARVNMIETINGPDMQGVAA
AEAPSWYKNWESTGLVGWEDKNGDGKMFYSGDERNEMKINRDIIVLASPELAKLPNWVVALLAAGGLAAALSTAAGLLLV
ISTSISHDLLKKGFRPNMTDKQELLAARLAAMIAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYKKMNKE
GAIAGMLSGIAFTASYIIYFKFINPAASTPENWWFGISPEGIGTLGMCLNFVVSIAVNKVTAEVPQDVQEMVENIRYPKG
AGEAHDH

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI310128183, Length=564, Percent_Identity=22.5177304964539, Blast_Score=86, Evalue=1e-16,
Organism=Escherichia coli, GI1790503, Length=491, Percent_Identity=26.2729124236253, Blast_Score=152, Evalue=7e-38,
Organism=Escherichia coli, GI1787251, Length=506, Percent_Identity=21.7391304347826, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 60797; Mature: 60797

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQTWTFILVGITFAVYIGIAIWARAGTTSEFYVAGGGVHPVANGMATAADWMSAASFI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHH
SMAGIISFVGYDGAVYLMGWTGGYVLLALCLAPYLRKFGQFTVPDFIGERYYSKTARMVA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VFCAIFVSFTYVAGQMRGVGVVFSRFLEVDINLGIIIGMGIVFFYAVLGGMKGITYTQVA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
QFCVLIFAFLVPAIFTSIMMTGNPLPQVGMGSTLSGTDVYLLDKLDGLTEELGFTAYTEG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHCCHHHHHCCEEEECC
NKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVRDARISAGWALLFISLLYTTAPGVAA
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHCCCCHHH
FARVNMIETINGPDMQGVAAAEAPSWYKNWESTGLVGWEDKNGDGKMFYSGDERNEMKIN
HHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEC
RDIIVLASPELAKLPNWVVALLAAGGLAAALSTAAGLLLVISTSISHDLLKKGFRPNMTD
CCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KQELLAARLAAMIAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYKKMNKE
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAIAGMLSGIAFTASYIIYFKFINPAASTPENWWFGISPEGIGTLGMCLNFVVSIAVNKV
CHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH
TAEVPQDVQEMVENIRYPKGAGEAHDH
HHHCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDIQTWTFILVGITFAVYIGIAIWARAGTTSEFYVAGGGVHPVANGMATAADWMSAASFI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHH
SMAGIISFVGYDGAVYLMGWTGGYVLLALCLAPYLRKFGQFTVPDFIGERYYSKTARMVA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VFCAIFVSFTYVAGQMRGVGVVFSRFLEVDINLGIIIGMGIVFFYAVLGGMKGITYTQVA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
QFCVLIFAFLVPAIFTSIMMTGNPLPQVGMGSTLSGTDVYLLDKLDGLTEELGFTAYTEG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHCCHHHHHCCEEEECC
NKSMVDVFFICAALMVGTAGLPHVIIRFFTVPKVRDARISAGWALLFISLLYTTAPGVAA
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHCCCCHHH
FARVNMIETINGPDMQGVAAAEAPSWYKNWESTGLVGWEDKNGDGKMFYSGDERNEMKIN
HHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEC
RDIIVLASPELAKLPNWVVALLAAGGLAAALSTAAGLLLVISTSISHDLLKKGFRPNMTD
CCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KQELLAARLAAMIAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIILGIFYKKMNKE
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAIAGMLSGIAFTASYIIYFKFINPAASTPENWWFGISPEGIGTLGMCLNFVVSIAVNKV
CHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHH
TAEVPQDVQEMVENIRYPKGAGEAHDH
HHHCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]