| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is metL [H]
Identifier: 218710810
GI number: 218710810
Start: 3044929
End: 3047340
Strand: Reverse
Name: metL [H]
Synonym: VS_2893
Alternate gene names: 218710810
Gene position: 3047340-3044929 (Counterclockwise)
Preceding gene: 218710811
Following gene: 218710809
Centisome position: 92.36
GC content: 49.0
Gene sequence:
>2412_bases ATGACAACCTTTCGCCAGCTACATAAATTTGGTGGCAGCAGTTTAGCGAACCCAGAGTGTTACCAACGCGTGGTCAATAT TCTTAGAGAATACTCATCAACTACTGACTTGGTCGTGGTATCAGCTGCGGGTAAAACAACTAACCGCTTGATTGAGTTTG TTGAAGCGCTCGACAAAGATGGTCGTATCGCTCACGAATGTCTACAAACCCTTCGTCAGTTCCAACTTGAGCTGATTGAA GCGCTGCTTGAAGGTGAGTCTGCGGCTCAGCTAACGGCCGCTATTCAACAAGAATTTACTGCTTTGGGTGAGCTAACTGC TCCTCTAAGCGAATCGCAAAAAGCACAGGTGTTAGGACACGGTGAGGTTTGGTCTTCACGTTTGTTAGCCGCTCTGTTGT GCCAACATGACTTACAAGCAGTTGCTCAAGATGCGCGTGCCTTTTTACGTGCAGAAGCGGGTGCTCAACCCGAAGTGGAT CGCGCGCGTTCTTATCCTCTGATTAAAGAAGTTTTGGCTCAGCATACGCATTGCCGAGTGGTGATTACGGGCTTTATGGC TCAGAACTGCGAAGGCGAAACGGTACTGCTAGGTCGTAACGGCTCGGATTACTCAGCAACTGTGATTGGCGCCTTGGCTG AAGTTGAACGTGTGACGATTTGGAGTGACGTGGCGGGCGTATACAGCGCTGACCCTCGTTTGGTTTCGGATGCGTGTTTA CTGCCTCTGCTTCGCCTTGATGAAGCGAGTGAACTCGCTCGTCTGGCGGCTCCAGTGCTCCATAGCCGAACGCTACAGCC TGTGGCTCAAAGTGCTATGGATCTCAGCTTGCGCTGCAGCTACCAGCCGGAGGCGGGCTCTACACAGATAGAGCGTGTAC TGGCATCGGGTCGTGGCGCAAAAATTATTACCTCTCTGGATGAAGTTCTGATCGTGCAGCTGACCTTTGGTCATGGCCAT GATTTTGACCGTCTAGAAAGTGAAGTACTGGAAGGGCTTAAGCGAGCTCAATTAGAGCCGCTTGCTTATGAGCTTGAACC GGATCAGCACTGCTTACGTCTTGCTTATACAGAAGAGATCGCTGGTGGTGCATTAGAATATCTACAAGACCACGCGATTG AAGCGGAGATTAAGCTCAAAGAAGGTTTCTCTCTTATCGCGGCGGTAGGTGCGGGTGTGACTAAGAACCCGAACCATTGC TACGGTTTCTACCAGCAGCTCAAGAGCTCGCCAGTTGAGTTTATCTCAGAAGCGAACTCTGGCTTGAGCTTAGTCGCTGT GATTCGTAAGAGTGAGACATCAAGCCTAGTGAAAGGCATTCACTCTCAACTGTTCCAAGCGCAGAAGCGTGTTGCGATTG CCTTGTGTGGCAAGGGCAATATTGGTTCAAGTTGGTTAAGCCTGTTTGCTGAGCAAAAGGCGGAACTTGAAAAGCGCCGT GGGATGAACTTTGAATTGGTTGCGGTGGTTGATAGCCAAACTTATTGGTTCGACGATCAAGGCATTGATGCGACTTCAGT TGGTAAACGCTTTGATGACGAAGCGATTGCCAATAATGGTAATGACTGGTTAGAGCGTTTGGGTTCTATTCAGGGTTACG ATGAAGCTGTAGTACTCGATGTCACTGCAAGCCCAGTGCTTGCAGCAAAATATCTGCAAGTCGCACAACAAGGTATTCAC CTGATTTCGGCTAACAAGGTGGCTGGTTCTGCATCGAGCGAGTATTACCATCAAGTACAGGATGCTTTCGCTAAGATCAG CCGTCACTGGTTGTACAACGCGACCGTTGGTGCAGGCCTGCCGATTAACCACACAGTCAGAGACTTGCGTGAAAGTGGCG ATGACATTATTGCGCTGTCAGGTATCTTTTCAGGCACGCTGTCTTGGTTGTTCCAACAGTTTGATGGCACCGTGCCATTC AGCGAGTTGGTTGACTTGGCATGGCAACAAGGTCTTACGGAACCAGACCCTCGTGCTGACCTAGATGGTTCAGACGTGAT GCGTAAGCTGGTGATTCTGGCGCGTGAATCGGGTTTAGATATTGAGCCTGAAAACGTCAAAGTAGAATCATTGGTACCTG AAGAATTACAAGATCTGTCAGTGGATGACTTCTTTGATAAAGCTTCTGTACTGAGTGAAGAGTTGGCCGAGCGTTTAGAG AAAGCGCAGTCTCAACAGAAGGTCCTTCGTTACGTAGCGCGTTTAGAGAAGAGTGGTAAGGCAACGGTAGGCGTTGAAGC GTTATCTAAAGAACACGCTCTGGCGAACTTACTGCCTTGCGACAACATCTTTGCGATTGAGAGCAAATGGTACAAAGATA ATCCATTGGTTATTCGTGGCCCGGGTGCTGGTCGTGAAGTAACAGCTGGTGCAATTCAGTCTGATTTAAACAGAATGTCT AGCCTGTTTTAA
Upstream 100 bases:
>100_bases GCCTTTCTGTTGGCCTTGAAGATGCAGAAGACTTGATTGATGATCTCAAGCAAGCGTTTGAAAAAACACAAGGCTTTATC GCAGAAGGGGAGGTTTAATA
Downstream 100 bases:
>100_bases TACTGAGAGCGTTTGGCTTAATACTGAGAGCGTTTGGCTTAATACTTAGAGCGATTGGCATAATAGTCAGATCAATTGCT TTAATACTCAGATTAATTGT
Product: bifunctional aspartate kinase II/homoserine dehydrogenase II
Products: NA
Alternate protein names: Aspartokinase II/homoserine dehydrogenase II; AKII-HDII; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 803; Mature: 802
Protein sequence:
>803_residues MTTFRQLHKFGGSSLANPECYQRVVNILREYSSTTDLVVVSAAGKTTNRLIEFVEALDKDGRIAHECLQTLRQFQLELIE ALLEGESAAQLTAAIQQEFTALGELTAPLSESQKAQVLGHGEVWSSRLLAALLCQHDLQAVAQDARAFLRAEAGAQPEVD RARSYPLIKEVLAQHTHCRVVITGFMAQNCEGETVLLGRNGSDYSATVIGALAEVERVTIWSDVAGVYSADPRLVSDACL LPLLRLDEASELARLAAPVLHSRTLQPVAQSAMDLSLRCSYQPEAGSTQIERVLASGRGAKIITSLDEVLIVQLTFGHGH DFDRLESEVLEGLKRAQLEPLAYELEPDQHCLRLAYTEEIAGGALEYLQDHAIEAEIKLKEGFSLIAAVGAGVTKNPNHC YGFYQQLKSSPVEFISEANSGLSLVAVIRKSETSSLVKGIHSQLFQAQKRVAIALCGKGNIGSSWLSLFAEQKAELEKRR GMNFELVAVVDSQTYWFDDQGIDATSVGKRFDDEAIANNGNDWLERLGSIQGYDEAVVLDVTASPVLAAKYLQVAQQGIH LISANKVAGSASSEYYHQVQDAFAKISRHWLYNATVGAGLPINHTVRDLRESGDDIIALSGIFSGTLSWLFQQFDGTVPF SELVDLAWQQGLTEPDPRADLDGSDVMRKLVILARESGLDIEPENVKVESLVPEELQDLSVDDFFDKASVLSEELAERLE KAQSQQKVLRYVARLEKSGKATVGVEALSKEHALANLLPCDNIFAIESKWYKDNPLVIRGPGAGREVTAGAIQSDLNRMS SLF
Sequences:
>Translated_803_residues MTTFRQLHKFGGSSLANPECYQRVVNILREYSSTTDLVVVSAAGKTTNRLIEFVEALDKDGRIAHECLQTLRQFQLELIE ALLEGESAAQLTAAIQQEFTALGELTAPLSESQKAQVLGHGEVWSSRLLAALLCQHDLQAVAQDARAFLRAEAGAQPEVD RARSYPLIKEVLAQHTHCRVVITGFMAQNCEGETVLLGRNGSDYSATVIGALAEVERVTIWSDVAGVYSADPRLVSDACL LPLLRLDEASELARLAAPVLHSRTLQPVAQSAMDLSLRCSYQPEAGSTQIERVLASGRGAKIITSLDEVLIVQLTFGHGH DFDRLESEVLEGLKRAQLEPLAYELEPDQHCLRLAYTEEIAGGALEYLQDHAIEAEIKLKEGFSLIAAVGAGVTKNPNHC YGFYQQLKSSPVEFISEANSGLSLVAVIRKSETSSLVKGIHSQLFQAQKRVAIALCGKGNIGSSWLSLFAEQKAELEKRR GMNFELVAVVDSQTYWFDDQGIDATSVGKRFDDEAIANNGNDWLERLGSIQGYDEAVVLDVTASPVLAAKYLQVAQQGIH LISANKVAGSASSEYYHQVQDAFAKISRHWLYNATVGAGLPINHTVRDLRESGDDIIALSGIFSGTLSWLFQQFDGTVPF SELVDLAWQQGLTEPDPRADLDGSDVMRKLVILARESGLDIEPENVKVESLVPEELQDLSVDDFFDKASVLSEELAERLE KAQSQQKVLRYVARLEKSGKATVGVEALSKEHALANLLPCDNIFAIESKWYKDNPLVIRGPGAGREVTAGAIQSDLNRMS SLF >Mature_802_residues TTFRQLHKFGGSSLANPECYQRVVNILREYSSTTDLVVVSAAGKTTNRLIEFVEALDKDGRIAHECLQTLRQFQLELIEA LLEGESAAQLTAAIQQEFTALGELTAPLSESQKAQVLGHGEVWSSRLLAALLCQHDLQAVAQDARAFLRAEAGAQPEVDR ARSYPLIKEVLAQHTHCRVVITGFMAQNCEGETVLLGRNGSDYSATVIGALAEVERVTIWSDVAGVYSADPRLVSDACLL PLLRLDEASELARLAAPVLHSRTLQPVAQSAMDLSLRCSYQPEAGSTQIERVLASGRGAKIITSLDEVLIVQLTFGHGHD FDRLESEVLEGLKRAQLEPLAYELEPDQHCLRLAYTEEIAGGALEYLQDHAIEAEIKLKEGFSLIAAVGAGVTKNPNHCY GFYQQLKSSPVEFISEANSGLSLVAVIRKSETSSLVKGIHSQLFQAQKRVAIALCGKGNIGSSWLSLFAEQKAELEKRRG MNFELVAVVDSQTYWFDDQGIDATSVGKRFDDEAIANNGNDWLERLGSIQGYDEAVVLDVTASPVLAAKYLQVAQQGIHL ISANKVAGSASSEYYHQVQDAFAKISRHWLYNATVGAGLPINHTVRDLRESGDDIIALSGIFSGTLSWLFQQFDGTVPFS ELVDLAWQQGLTEPDPRADLDGSDVMRKLVILARESGLDIEPENVKVESLVPEELQDLSVDDFFDKASVLSEELAERLEK AQSQQKVLRYVARLEKSGKATVGVEALSKEHALANLLPCDNIFAIESKWYKDNPLVIRGPGAGREVTAGAIQSDLNRMSS LF
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790376, Length=803, Percent_Identity=57.7833125778331, Blast_Score=934, Evalue=0.0, Organism=Escherichia coli, GI1786183, Length=840, Percent_Identity=29.6428571428571, Blast_Score=317, Evalue=1e-87, Organism=Escherichia coli, GI1790455, Length=461, Percent_Identity=26.8980477223427, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6322599, Length=358, Percent_Identity=31.5642458100559, Blast_Score=162, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320893, Length=366, Percent_Identity=21.5846994535519, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 87805; Mature: 87674
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFRQLHKFGGSSLANPECYQRVVNILREYSSTTDLVVVSAAGKTTNRLIEFVEALDKD CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCC GRIAHECLQTLRQFQLELIEALLEGESAAQLTAAIQQEFTALGELTAPLSESQKAQVLGH CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEC GEVWSSRLLAALLCQHDLQAVAQDARAFLRAEAGAQPEVDRARSYPLIKEVLAQHTHCRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHCCCCCEE VITGFMAQNCEGETVLLGRNGSDYSATVIGALAEVERVTIWSDVAGVYSADPRLVSDACL EEEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LPLLRLDEASELARLAAPVLHSRTLQPVAQSAMDLSLRCSYQPEAGSTQIERVLASGRGA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHCCCCC KIITSLDEVLIVQLTFGHGHDFDRLESEVLEGLKRAQLEPLAYELEPDQHCLRLAYTEEI HHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHH AGGALEYLQDHAIEAEIKLKEGFSLIAAVGAGVTKNPNHCYGFYQQLKSSPVEFISEANS CCHHHHHHHHHCCCEEEEHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCC GLSLVAVIRKSETSSLVKGIHSQLFQAQKRVAIALCGKGNIGSSWLSLFAEQKAELEKRR CCEEEEEHHHCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHC GMNFELVAVVDSQTYWFDDQGIDATSVGKRFDDEAIANNGNDWLERLGSIQGYDEAVVLD CCCEEEEEEEECCEEEECCCCCCHHHHCCCCCCHHHHCCCHHHHHHHCCCCCCCCEEEEE VTASPVLAAKYLQVAQQGIHLISANKVAGSASSEYYHQVQDAFAKISRHWLYNATVGAGL ECCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCC PINHTVRDLRESGDDIIALSGIFSGTLSWLFQQFDGTVPFSELVDLAWQQGLTEPDPRAD CCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC LDGSDVMRKLVILARESGLDIEPENVKVESLVPEELQDLSVDDFFDKASVLSEELAERLE CCHHHHHHHHHHHHHCCCCCCCCCCEEEHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH KAQSQQKVLRYVARLEKSGKATVGVEALSKEHALANLLPCDNIFAIESKWYKDNPLVIRG HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEC PGAGREVTAGAIQSDLNRMSSLF CCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTFRQLHKFGGSSLANPECYQRVVNILREYSSTTDLVVVSAAGKTTNRLIEFVEALDKD CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCC GRIAHECLQTLRQFQLELIEALLEGESAAQLTAAIQQEFTALGELTAPLSESQKAQVLGH CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEC GEVWSSRLLAALLCQHDLQAVAQDARAFLRAEAGAQPEVDRARSYPLIKEVLAQHTHCRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHCCCCCEE VITGFMAQNCEGETVLLGRNGSDYSATVIGALAEVERVTIWSDVAGVYSADPRLVSDACL EEEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LPLLRLDEASELARLAAPVLHSRTLQPVAQSAMDLSLRCSYQPEAGSTQIERVLASGRGA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHCCCCC KIITSLDEVLIVQLTFGHGHDFDRLESEVLEGLKRAQLEPLAYELEPDQHCLRLAYTEEI HHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHH AGGALEYLQDHAIEAEIKLKEGFSLIAAVGAGVTKNPNHCYGFYQQLKSSPVEFISEANS CCHHHHHHHHHCCCEEEEHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCC GLSLVAVIRKSETSSLVKGIHSQLFQAQKRVAIALCGKGNIGSSWLSLFAEQKAELEKRR CCEEEEEHHHCHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHC GMNFELVAVVDSQTYWFDDQGIDATSVGKRFDDEAIANNGNDWLERLGSIQGYDEAVVLD CCCEEEEEEEECCEEEECCCCCCHHHHCCCCCCHHHHCCCHHHHHHHCCCCCCCCEEEEE VTASPVLAAKYLQVAQQGIHLISANKVAGSASSEYYHQVQDAFAKISRHWLYNATVGAGL ECCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCC PINHTVRDLRESGDDIIALSGIFSGTLSWLFQQFDGTVPFSELVDLAWQQGLTEPDPRAD CCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC LDGSDVMRKLVILARESGLDIEPENVKVESLVPEELQDLSVDDFFDKASVLSEELAERLE CCHHHHHHHHHHHHHCCCCCCCCCCEEEHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH KAQSQQKVLRYVARLEKSGKATVGVEALSKEHALANLLPCDNIFAIESKWYKDNPLVIRG HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEC PGAGREVTAGAIQSDLNRMSSLF CCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6298218; 8346018; 9278503 [H]