Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is ppc

Identifier: 218710807

GI number: 218710807

Start: 3040011

End: 3042641

Strand: Direct

Name: ppc

Synonym: VS_2890

Alternate gene names: 218710807

Gene position: 3040011-3042641 (Clockwise)

Preceding gene: 218710806

Following gene: 218710808

Centisome position: 92.14

GC content: 48.27

Gene sequence:

>2631_bases
ATGAACGAGAAATACGCCGCTCTCAAGAGTAACGTAAGCATGCTGGGACGCTTGCTAGGTAACACAATCCAAGATGCACA
TGGTGACGTTATCTTAGAGAAAGTGGAGACTATCCGTAAACTTTCCAAATCCGCCCGCGCAGGCAACAAAGCTGACCGTG
ACAGCCTAGTTGAAGAAATCAAAAACCTGCCGAACGAACAACTCACTCCTGTTGCTCGTGCATTTAACCAATTTCTCAAC
CTCACCAACATGGCAGAGCAATACCATACGATCTCTCGCCACTGTGAGGAGCATGTTTGTGAACCAGATGTGCTGCAATC
TCTATTTTCCAAATTAAATCAGAATGACATCAGCAAGCTAGACGCGGCTCAAGCCGTTCGCGACCTGAACATTGAACTCG
TTCTGACTGCACACCCAACAGAAATCACTCGTCGCACCATGATCAACAAGCTGGTTAAGATCAACGAGTGTCTGTCTAAA
TTAGAATTAAGCGACCTATCACACAAAGAGCGTGCCAAGACAGAACGCCGCCTAGAGCAACTTATTGCTCAAGGTTGGCA
CTCGGATGTGATTCGTCAGCAACGTCCTACTCCACTTGATGAAGCTAAGTGGGGCTTTGCGGTTGTCGAAAACTCACTTT
GGGAAGCTGTGCCTGATTTCCTACGTGAAATGGATGGTCGATTAAAAGGTTACCTTGGTGAAGGCCTGCCAATTGATGCG
CGCCCTGTTCATTTCTCATCTTGGATGGGTGGTGACCGCGATGGTAACCCATTCGTAACGCACACCATCACTAAAGAAGT
ACTGCGTCTGTCTCGCTGGAAAGCCGCTGATCTGTACCTAGGTGACGTGAACGAGTTGATTACCGAACTGTCGATGACCA
AGTGTAATGATGCCGTTCGTGAATTGGCTGGCGATGAGCACGAAGCTTACCGTGCAATCCTGAAGAGCCTACGTACTCTG
CTCAACAACACGCTAGAAGTGCTTGATGCAAAACTGCACGACGCAGAAGTACCGAAGAAAGAAACTCTACAGAACATAGA
CCAACTTTGGACACCACTTTACGCATGTTACCAATCGCTGCACGAATGTGGCATGGGCGTAATCGCGGACGGTTCTCTAC
TTGATACGCTACGCCGCCTAAAAGCATTCGGCGTGCACTTGGTTCGTCTCGATGTTCGTCAAGAAAGTACTCGTCACTCA
GATGTGCTATCTGAATTGACTCGCTACCTAGGCATTGGTGATTACGACCAATGGAGCGAGCAAGATAAGGTTGCTTTCTT
AACCAATGAATTAAGCTCAAAGCGCCCACTGTTACCACGCGACTGGGAACCATCTGAGCAGGTCAAAGAGGTTTTAGACA
CCTGTAAGGTCGTTGCTGCTCAACCTCGTGAAGCCTTTGGTGCTTACGTGATCTCTATGGCTCGTACTGCGTCGGATGTA
TTGGCTGTACATTTGCTTCTACAAGAATGTGGTTGCCCGTACCGCATGGACGTATGTCCATTGTTCGAAACGCTAGACGA
CTTGAACAACTCAGAAGCCGTAATGAAACAGCTAATGAGCATCGATTTATACCGTGGCTTTATCCAGAACCACCAAATGG
TGATGATCGGATATTCTGACTCAGCTAAAGATGCCGGTGTAATGTCTGCAGGCTGGGCGCAATACGATGCAATGGACAAG
CTAGTTAAGGCTTGTGAAGAAGAAGGCATTGAACTGACTCTATTCCACGGTCGTGGTGGTACGGTTGGTCGTGGTGGTGC
GCCAGCGCACGCGGCTCTTCTTTCTCAGCCACCTAAAAGCTTGAAAGGCGGCTTACGTGTAACTGAACAAGGCGAAATGA
TCCGCTTTAAACTTGGCTTGCCAGATGTTGCAGTTAATAGCTTCAACCTATACGCAAGTGCGATTCTAGAAGCGAACCTT
CTGCCACCACCAGAGCCAAAACAAGAATGGCGCGACCTAATGGAAGTGCTGTCTGAAGTATCTTGCGAAGCTTACCGCAA
CGTCGTTCGTGGTGAAGAGAAGTTTGTTCCTTACTTCCGCCAAGCGACGCCAGAGCTAGAGTTAGGCAAGTTACCTCTTG
GTTCTCGTCCTGCGAAACGTAACCCGAACGGCGGCGTAGAAAGCCTACGTGCGATCCCATGGATCTTCTCATGGAGCCAA
AACCGTTTGGTACTTCCTGCATGGTTAGGCGCTGGTGAAGCGATTCAATACTCTGTCGATCAAGGCCATCAAGCGCTACT
TGAAGAGATGTGTCGTGAATGGCCATTCTTCTCGACTCGTCTAGGTATGTTGGAAATGGTGTACTCGAAGTGCAACATGG
AAATAGCTAAGTACTACGACCAGCGACTTGTTGACGAAGAGCTATTACCTCTGGGTGAGTTACTGCGTGAACAGCTGCAA
AAAGACATCAAAGCGGTGCTGAATGTAGAAAATAACGAGAACTTGATGCAAAGCGACCCTTGGGGACTTGAGTCAATTCG
TCTACGTAACATCTATGTTGAGCCACTAAACATGCTTCAAGCGGAACTGCTTTACCGTACTCGTAAGTGTGAAACACCAC
CAGCAGAGCTAGAAGAAGCGCTAATGGTGACGATTGCAGGTATTGCAGCAGGTATGCGAAACACTGGTTAA

Upstream 100 bases:

>100_bases
AAACTTAGAATGCTTTATTTGACTAGATACAGCACTTTTCGCTAGATTGTGTACTTAACAAGGAACAATGGATGTAATTT
TTTTACGAGGCAGGATGACA

Downstream 100 bases:

>100_bases
TTAGTGATTCCTACTATAACCTGCCCAGCATTTACATCTACAAAAAGAACAAAAGGTCGCCATTGGCGGCCTTTTTATTT
TGCCAAATGACCACTAGTGA

Product: phosphoenolpyruvate carboxylase

Products: NA

Alternate protein names: PEPC; PEPCase

Number of amino acids: Translated: 876; Mature: 876

Protein sequence:

>876_residues
MNEKYAALKSNVSMLGRLLGNTIQDAHGDVILEKVETIRKLSKSARAGNKADRDSLVEEIKNLPNEQLTPVARAFNQFLN
LTNMAEQYHTISRHCEEHVCEPDVLQSLFSKLNQNDISKLDAAQAVRDLNIELVLTAHPTEITRRTMINKLVKINECLSK
LELSDLSHKERAKTERRLEQLIAQGWHSDVIRQQRPTPLDEAKWGFAVVENSLWEAVPDFLREMDGRLKGYLGEGLPIDA
RPVHFSSWMGGDRDGNPFVTHTITKEVLRLSRWKAADLYLGDVNELITELSMTKCNDAVRELAGDEHEAYRAILKSLRTL
LNNTLEVLDAKLHDAEVPKKETLQNIDQLWTPLYACYQSLHECGMGVIADGSLLDTLRRLKAFGVHLVRLDVRQESTRHS
DVLSELTRYLGIGDYDQWSEQDKVAFLTNELSSKRPLLPRDWEPSEQVKEVLDTCKVVAAQPREAFGAYVISMARTASDV
LAVHLLLQECGCPYRMDVCPLFETLDDLNNSEAVMKQLMSIDLYRGFIQNHQMVMIGYSDSAKDAGVMSAGWAQYDAMDK
LVKACEEEGIELTLFHGRGGTVGRGGAPAHAALLSQPPKSLKGGLRVTEQGEMIRFKLGLPDVAVNSFNLYASAILEANL
LPPPEPKQEWRDLMEVLSEVSCEAYRNVVRGEEKFVPYFRQATPELELGKLPLGSRPAKRNPNGGVESLRAIPWIFSWSQ
NRLVLPAWLGAGEAIQYSVDQGHQALLEEMCREWPFFSTRLGMLEMVYSKCNMEIAKYYDQRLVDEELLPLGELLREQLQ
KDIKAVLNVENNENLMQSDPWGLESIRLRNIYVEPLNMLQAELLYRTRKCETPPAELEEALMVTIAGIAAGMRNTG

Sequences:

>Translated_876_residues
MNEKYAALKSNVSMLGRLLGNTIQDAHGDVILEKVETIRKLSKSARAGNKADRDSLVEEIKNLPNEQLTPVARAFNQFLN
LTNMAEQYHTISRHCEEHVCEPDVLQSLFSKLNQNDISKLDAAQAVRDLNIELVLTAHPTEITRRTMINKLVKINECLSK
LELSDLSHKERAKTERRLEQLIAQGWHSDVIRQQRPTPLDEAKWGFAVVENSLWEAVPDFLREMDGRLKGYLGEGLPIDA
RPVHFSSWMGGDRDGNPFVTHTITKEVLRLSRWKAADLYLGDVNELITELSMTKCNDAVRELAGDEHEAYRAILKSLRTL
LNNTLEVLDAKLHDAEVPKKETLQNIDQLWTPLYACYQSLHECGMGVIADGSLLDTLRRLKAFGVHLVRLDVRQESTRHS
DVLSELTRYLGIGDYDQWSEQDKVAFLTNELSSKRPLLPRDWEPSEQVKEVLDTCKVVAAQPREAFGAYVISMARTASDV
LAVHLLLQECGCPYRMDVCPLFETLDDLNNSEAVMKQLMSIDLYRGFIQNHQMVMIGYSDSAKDAGVMSAGWAQYDAMDK
LVKACEEEGIELTLFHGRGGTVGRGGAPAHAALLSQPPKSLKGGLRVTEQGEMIRFKLGLPDVAVNSFNLYASAILEANL
LPPPEPKQEWRDLMEVLSEVSCEAYRNVVRGEEKFVPYFRQATPELELGKLPLGSRPAKRNPNGGVESLRAIPWIFSWSQ
NRLVLPAWLGAGEAIQYSVDQGHQALLEEMCREWPFFSTRLGMLEMVYSKCNMEIAKYYDQRLVDEELLPLGELLREQLQ
KDIKAVLNVENNENLMQSDPWGLESIRLRNIYVEPLNMLQAELLYRTRKCETPPAELEEALMVTIAGIAAGMRNTG
>Mature_876_residues
MNEKYAALKSNVSMLGRLLGNTIQDAHGDVILEKVETIRKLSKSARAGNKADRDSLVEEIKNLPNEQLTPVARAFNQFLN
LTNMAEQYHTISRHCEEHVCEPDVLQSLFSKLNQNDISKLDAAQAVRDLNIELVLTAHPTEITRRTMINKLVKINECLSK
LELSDLSHKERAKTERRLEQLIAQGWHSDVIRQQRPTPLDEAKWGFAVVENSLWEAVPDFLREMDGRLKGYLGEGLPIDA
RPVHFSSWMGGDRDGNPFVTHTITKEVLRLSRWKAADLYLGDVNELITELSMTKCNDAVRELAGDEHEAYRAILKSLRTL
LNNTLEVLDAKLHDAEVPKKETLQNIDQLWTPLYACYQSLHECGMGVIADGSLLDTLRRLKAFGVHLVRLDVRQESTRHS
DVLSELTRYLGIGDYDQWSEQDKVAFLTNELSSKRPLLPRDWEPSEQVKEVLDTCKVVAAQPREAFGAYVISMARTASDV
LAVHLLLQECGCPYRMDVCPLFETLDDLNNSEAVMKQLMSIDLYRGFIQNHQMVMIGYSDSAKDAGVMSAGWAQYDAMDK
LVKACEEEGIELTLFHGRGGTVGRGGAPAHAALLSQPPKSLKGGLRVTEQGEMIRFKLGLPDVAVNSFNLYASAILEANL
LPPPEPKQEWRDLMEVLSEVSCEAYRNVVRGEEKFVPYFRQATPELELGKLPLGSRPAKRNPNGGVESLRAIPWIFSWSQ
NRLVLPAWLGAGEAIQYSVDQGHQALLEEMCREWPFFSTRLGMLEMVYSKCNMEIAKYYDQRLVDEELLPLGELLREQLQ
KDIKAVLNVENNENLMQSDPWGLESIRLRNIYVEPLNMLQAELLYRTRKCETPPAELEEALMVTIAGIAAGMRNTG

Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle

COG id: COG2352

COG function: function code C; Phosphoenolpyruvate carboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PEPCase type 1 family

Homologues:

Organism=Escherichia coli, GI1790393, Length=885, Percent_Identity=64.0677966101695, Blast_Score=1135, Evalue=0.0,

Paralogues:

None

Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): CAPP_VIBSL (B7VLL5)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002418428.1
- GeneID:   7162374
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_2890
- HOGENOM:   HBG351035
- OMA:   AIPWVFG
- ProtClustDB:   PRK00009
- HAMAP:   MF_00595
- InterPro:   IPR021135
- InterPro:   IPR018129
- InterPro:   IPR022805
- InterPro:   IPR015813
- PRINTS:   PR00150

Pfam domain/function: PF00311 PEPcase; SSF51621 Pyrv/PenolPyrv_Kinase_cat

EC number: =4.1.1.31

Molecular weight: Translated: 98878; Mature: 98878

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00781 PEPCASE_1; PS00393 PEPCASE_2

Important sites: ACT_SITE 138-138 ACT_SITE 543-543

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKYAALKSNVSMLGRLLGNTIQDAHGDVILEKVETIRKLSKSARAGNKADRDSLVEEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KNLPNEQLTPVARAFNQFLNLTNMAEQYHTISRHCEEHVCEPDVLQSLFSKLNQNDISKL
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHH
DAAQAVRDLNIELVLTAHPTEITRRTMINKLVKINECLSKLELSDLSHKERAKTERRLEQ
HHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LIAQGWHSDVIRQQRPTPLDEAKWGFAVVENSLWEAVPDFLREMDGRLKGYLGEGLPIDA
HHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RPVHFSSWMGGDRDGNPFVTHTITKEVLRLSRWKAADLYLGDVNELITELSMTKCNDAVR
CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHH
ELAGDEHEAYRAILKSLRTLLNNTLEVLDAKLHDAEVPKKETLQNIDQLWTPLYACYQSL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
HECGMGVIADGSLLDTLRRLKAFGVHLVRLDVRQESTRHSDVLSELTRYLGIGDYDQWSE
HHCCCCEEECCHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
QDKVAFLTNELSSKRPLLPRDWEPSEQVKEVLDTCKVVAAQPREAFGAYVISMARTASDV
CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LAVHLLLQECGCPYRMDVCPLFETLDDLNNSEAVMKQLMSIDLYRGFIQNHQMVMIGYSD
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
SAKDAGVMSAGWAQYDAMDKLVKACEEEGIELTLFHGRGGTVGRGGAPAHAALLSQPPKS
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHH
LKGGLRVTEQGEMIRFKLGLPDVAVNSFNLYASAILEANLLPPPEPKQEWRDLMEVLSEV
HHCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
SCEAYRNVVRGEEKFVPYFRQATPELELGKLPLGSRPAKRNPNGGVESLRAIPWIFSWSQ
HHHHHHHHHCCCHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHEECCC
NRLVLPAWLGAGEAIQYSVDQGHQALLEEMCREWPFFSTRLGMLEMVYSKCNMEIAKYYD
CCEEEEEECCCCCCEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
QRLVDEELLPLGELLREQLQKDIKAVLNVENNENLMQSDPWGLESIRLRNIYVEPLNMLQ
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEHHEEHHHHHHHH
AELLYRTRKCETPPAELEEALMVTIAGIAAGMRNTG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNEKYAALKSNVSMLGRLLGNTIQDAHGDVILEKVETIRKLSKSARAGNKADRDSLVEEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KNLPNEQLTPVARAFNQFLNLTNMAEQYHTISRHCEEHVCEPDVLQSLFSKLNQNDISKL
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHH
DAAQAVRDLNIELVLTAHPTEITRRTMINKLVKINECLSKLELSDLSHKERAKTERRLEQ
HHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LIAQGWHSDVIRQQRPTPLDEAKWGFAVVENSLWEAVPDFLREMDGRLKGYLGEGLPIDA
HHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RPVHFSSWMGGDRDGNPFVTHTITKEVLRLSRWKAADLYLGDVNELITELSMTKCNDAVR
CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHH
ELAGDEHEAYRAILKSLRTLLNNTLEVLDAKLHDAEVPKKETLQNIDQLWTPLYACYQSL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
HECGMGVIADGSLLDTLRRLKAFGVHLVRLDVRQESTRHSDVLSELTRYLGIGDYDQWSE
HHCCCCEEECCHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
QDKVAFLTNELSSKRPLLPRDWEPSEQVKEVLDTCKVVAAQPREAFGAYVISMARTASDV
CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LAVHLLLQECGCPYRMDVCPLFETLDDLNNSEAVMKQLMSIDLYRGFIQNHQMVMIGYSD
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
SAKDAGVMSAGWAQYDAMDKLVKACEEEGIELTLFHGRGGTVGRGGAPAHAALLSQPPKS
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHH
LKGGLRVTEQGEMIRFKLGLPDVAVNSFNLYASAILEANLLPPPEPKQEWRDLMEVLSEV
HHCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
SCEAYRNVVRGEEKFVPYFRQATPELELGKLPLGSRPAKRNPNGGVESLRAIPWIFSWSQ
HHHHHHHHHCCCHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHEECCC
NRLVLPAWLGAGEAIQYSVDQGHQALLEEMCREWPFFSTRLGMLEMVYSKCNMEIAKYYD
CCEEEEEECCCCCCEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
QRLVDEELLPLGELLREQLQKDIKAVLNVENNENLMQSDPWGLESIRLRNIYVEPLNMLQ
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEHHEEHHHHHHHH
AELLYRTRKCETPPAELEEALMVTIAGIAAGMRNTG
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA