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The map label for this gene is padR [H]

Identifier: 218710808

GI number: 218710808

Start: 3043013

End: 3043552

Strand: Direct

Name: padR [H]

Synonym: VS_2891

Alternate gene names: 218710808

Gene position: 3043013-3043552 (Clockwise)

Preceding gene: 218710807

Following gene: 218710812

Centisome position: 92.23

GC content: 46.48

Gene sequence:

>540_bases
ATGTCATTACCACACGTAATTTTAACCGTTTTAAGTACACGCGATGCTACTGGTTACGATATCACAAAAGAATTCTCCGC
AAGCATTGGTTACTTCTGGAAAGCTAGCCACCAACAAGTTTACCGCGAGCTAAATAAAATGGCTCAGAACGACCAGGTAA
CTTGCGTACTTGAGCCTCAAGAAGGCAAACCTGATCGTAAAGTTTACTCTATCACCGATGCTGGCCGTGGCGCGCTAGGT
GAATGGTTTGAACAACCAACTGCACACCCAACCGTTCGTGACGAGTTCTCAGCTAAGTTAATCGCTTGTGCTGTACAACC
TTCTGATGCGTACCGTGTACAACTTGCTGAACTAGTAGAAGAGTCTCGCAAACTGGTTTCTCACTACAAAGAAATCGAAG
CGGCTTACTACGCAACGCCATCTACACTAGACAAGCAAGCACGCCTAGAGCGTCTAACGCTTCGTCGTAACCTACTGATC
CGTGAAGCATGGATTGTATGGGCTGACGAAGTACTGCTTGAACTTGGCGCTCTTGCTTAA

Upstream 100 bases:

>100_bases
GATTGAGTTGGTGCTACTTGAACATAACCAATATAACGTGCCATAGAAGCACACTTGTTGTTCAAGTATTTGTTTACTGT
TTACCATTTGGATTTCAGAC

Downstream 100 bases:

>100_bases
GTTAAGCTAGAAACTAGAAAAGTAAAAGGCTTGAACTCTTAGAGTCCAAGCCTTTTTTGTATCTATAGGATTTGAAATGT
TACTACCAGAAGCTTTTACA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAQNDQVTCVLEPQEGKPDRKVYSITDAGRGALG
EWFEQPTAHPTVRDEFSAKLIACAVQPSDAYRVQLAELVEESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLI
REAWIVWADEVLLELGALA

Sequences:

>Translated_179_residues
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAQNDQVTCVLEPQEGKPDRKVYSITDAGRGALG
EWFEQPTAHPTVRDEFSAKLIACAVQPSDAYRVQLAELVEESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLI
REAWIVWADEVLLELGALA
>Mature_178_residues
SLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAQNDQVTCVLEPQEGKPDRKVYSITDAGRGALGE
WFEQPTAHPTVRDEFSAKLIACAVQPSDAYRVQLAELVEESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLIR
EAWIVWADEVLLELGALA

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 20327; Mature: 20196

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAQNDQVTCVLEPQ
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCC
EGKPDRKVYSITDAGRGALGEWFEQPTAHPTVRDEFSAKLIACAVQPSDAYRVQLAELVE
CCCCCCEEEEECCCCCCCHHHHHHCCCCCCCHHHHHCCEEEEEEECCCHHHHHHHHHHHH
ESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLIREAWIVWADEVLLELGALA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAQNDQVTCVLEPQ
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCC
EGKPDRKVYSITDAGRGALGEWFEQPTAHPTVRDEFSAKLIACAVQPSDAYRVQLAELVE
CCCCCCEEEEECCCCCCCHHHHHHCCCCCCCHHHHHCCEEEEEEECCCHHHHHHHHHHHH
ESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLIREAWIVWADEVLLELGALA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]