| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is iaaA [H]
Identifier: 218710762
GI number: 218710762
Start: 2989721
End: 2990686
Strand: Reverse
Name: iaaA [H]
Synonym: VS_2845
Alternate gene names: 218710762
Gene position: 2990686-2989721 (Counterclockwise)
Preceding gene: 218710763
Following gene: 218710759
Centisome position: 90.65
GC content: 45.96
Gene sequence:
>966_bases ATGTCACAGCCTTTTTCAATTGCCATTCATGGTGGTGCAGGCACCATCATACGAGAGCAAATGAGTGATGAATTAAAAAC GGGTATTACCGAGGCTTTGGAAAAATCGGTTTTGGCTGGCTATCAAGTATTACAGTCGGGTGGCGATGCGCTAGATGCAG TGGTTGCTTCAGTTAAGGTGATGGAAGACAGTCCCCACTTTAATGCCGGTAAAGGTTCTGTTCTGACTCATGATGAATTT GTTGAGATGGATGCTTCTGTGATGCACGGTCGTGAAATGGATGCGGGGGCTATTGCCGGTGTCCGCCATATCAAAAATCC AATTGAGCTTGCGCGTGATGTGATGCTTAAAAGCGACCATGTGCTGCTGATTGGTGAAGGCGCCGAGAAGTTTGCGTTTG AGCATGACCATACTTTCACCGAGCAAGATTACTTCTTTACTGAGCGTCGTTATGACCAACTTCAGTCGATGAAAGAGAAA GGTATTTTTGCTTTGTCTGAAGCGAAATATGATGAAGAGCAAGCAGATAAATATCCAGATGATAAAAAGTACGGCACGGT TGGCGCGGTCGCATTAGACCAAGCCGGAAACTTAGCAGCCGCAACCAGCACTGGTGGCGTAACCAATAAAAAATACGGTC GTGTGGGAGATTCTCCAATCATCGGTGCAGGCACTGTTGCTGAAAATGGCAACGTGGCCGTTTCAACAACAGGTATGGGG GAGTTCTTCCTTAGAAAGATGGTTGCCAGTGATGTGGCGGCACGAATGCGTTATCTCAAGGAAGATGTGCATACGGCTTG TGAAACGATTATTCAAGGTGAATTGAAAACCATGGGTGGTGAAGGAGGCTTGATTGCTATCGATGGACAAGGTGATATTC ATTTCGGTATGAACAGTTCAGGAATGTACCGTGCGAGTGTTGATACTAATGGCTGCGTGGAAGTAAAAATTTATGCCGAT GACTAA
Upstream 100 bases:
>100_bases TAAGCGTTCGTAAATAGTTTGGTTTTCGCTATCAGACATCAAACCATGGATGTGGTATTGATAGCACAACATTATAAGTC GACGTCAGTGGAGAGTTTGT
Downstream 100 bases:
>100_bases GTTTGTATTGGCTTAACTGACTTTAGTTGAATTAGCGCAGATTAAACAAACAAAAGGGCGACAGATAAGTATCTGTCGCC CTTTTGTTTTTCTATGTCCC
Product: asparaginase
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSQPFSIAIHGGAGTIIREQMSDELKTGITEALEKSVLAGYQVLQSGGDALDAVVASVKVMEDSPHFNAGKGSVLTHDEF VEMDASVMHGREMDAGAIAGVRHIKNPIELARDVMLKSDHVLLIGEGAEKFAFEHDHTFTEQDYFFTERRYDQLQSMKEK GIFALSEAKYDEEQADKYPDDKKYGTVGAVALDQAGNLAAATSTGGVTNKKYGRVGDSPIIGAGTVAENGNVAVSTTGMG EFFLRKMVASDVAARMRYLKEDVHTACETIIQGELKTMGGEGGLIAIDGQGDIHFGMNSSGMYRASVDTNGCVEVKIYAD D
Sequences:
>Translated_321_residues MSQPFSIAIHGGAGTIIREQMSDELKTGITEALEKSVLAGYQVLQSGGDALDAVVASVKVMEDSPHFNAGKGSVLTHDEF VEMDASVMHGREMDAGAIAGVRHIKNPIELARDVMLKSDHVLLIGEGAEKFAFEHDHTFTEQDYFFTERRYDQLQSMKEK GIFALSEAKYDEEQADKYPDDKKYGTVGAVALDQAGNLAAATSTGGVTNKKYGRVGDSPIIGAGTVAENGNVAVSTTGMG EFFLRKMVASDVAARMRYLKEDVHTACETIIQGELKTMGGEGGLIAIDGQGDIHFGMNSSGMYRASVDTNGCVEVKIYAD D >Mature_320_residues SQPFSIAIHGGAGTIIREQMSDELKTGITEALEKSVLAGYQVLQSGGDALDAVVASVKVMEDSPHFNAGKGSVLTHDEFV EMDASVMHGREMDAGAIAGVRHIKNPIELARDVMLKSDHVLLIGEGAEKFAFEHDHTFTEQDYFFTERRYDQLQSMKEKG IFALSEAKYDEEQADKYPDDKKYGTVGAVALDQAGNLAAATSTGGVTNKKYGRVGDSPIIGAGTVAENGNVAVSTTGMGE FFLRKMVASDVAARMRYLKEDVHTACETIIQGELKTMGGEGGLIAIDGQGDIHFGMNSSGMYRASVDTNGCVEVKIYADD
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=304, Percent_Identity=40.1315789473684, Blast_Score=179, Evalue=2e-45, Organism=Homo sapiens, GI145275200, Length=304, Percent_Identity=40.1315789473684, Blast_Score=179, Evalue=2e-45, Organism=Homo sapiens, GI98991769, Length=291, Percent_Identity=31.6151202749141, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI285002251, Length=261, Percent_Identity=31.8007662835249, Blast_Score=102, Evalue=4e-22, Organism=Escherichia coli, GI1787050, Length=301, Percent_Identity=50.4983388704319, Blast_Score=278, Evalue=3e-76, Organism=Caenorhabditis elegans, GI32564649, Length=277, Percent_Identity=25.2707581227437, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI18921183, Length=309, Percent_Identity=35.2750809061489, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI21357893, Length=268, Percent_Identity=30.9701492537313, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI221330102, Length=242, Percent_Identity=32.6446280991736, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24652135, Length=242, Percent_Identity=32.6446280991736, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 34451; Mature: 34320
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPFSIAIHGGAGTIIREQMSDELKTGITEALEKSVLAGYQVLQSGGDALDAVVASVKV CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHE MEDSPHFNAGKGSVLTHDEFVEMDASVMHGREMDAGAIAGVRHIKNPIELARDVMLKSDH ECCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCC VLLIGEGAEKFAFEHDHTFTEQDYFFTERRYDQLQSMKEKGIFALSEAKYDEEQADKYPD EEEEECCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCC DKKYGTVGAVALDQAGNLAAATSTGGVTNKKYGRVGDSPIIGAGTVAENGNVAVSTTGMG CCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEECCEEECCCCEEEEECCCH EFFLRKMVASDVAARMRYLKEDVHTACETIIQGELKTMGGEGGLIAIDGQGDIHFGMNSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCC GMYRASVDTNGCVEVKIYADD CEEEEECCCCCEEEEEEEECC >Mature Secondary Structure SQPFSIAIHGGAGTIIREQMSDELKTGITEALEKSVLAGYQVLQSGGDALDAVVASVKV CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHE MEDSPHFNAGKGSVLTHDEFVEMDASVMHGREMDAGAIAGVRHIKNPIELARDVMLKSDH ECCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCC VLLIGEGAEKFAFEHDHTFTEQDYFFTERRYDQLQSMKEKGIFALSEAKYDEEQADKYPD EEEEECCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCCC DKKYGTVGAVALDQAGNLAAATSTGGVTNKKYGRVGDSPIIGAGTVAENGNVAVSTTGMG CCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEECCEEECCCCEEEEECCCH EFFLRKMVASDVAARMRYLKEDVHTACETIIQGELKTMGGEGGLIAIDGQGDIHFGMNSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCC GMYRASVDTNGCVEVKIYADD CEEEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]