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The map label for this gene is slyA [C]

Identifier: 218710439

GI number: 218710439

Start: 2647446

End: 2647859

Strand: Reverse

Name: slyA [C]

Synonym: VS_2476

Alternate gene names: 218710439

Gene position: 2647859-2647446 (Counterclockwise)

Preceding gene: 218710440

Following gene: 218710438

Centisome position: 80.26

GC content: 41.79

Gene sequence:

>414_bases
GTGAGTATGCTGAACCAGAATTTAGAAAAGATTGAGCGCTTCGCCTCTAAGATATGGCGAACTCAGGTAAATGAAGATCC
TATTTGCCAATTGAGCTTCAATGAGTATGACTATTTGAAGGTCATTCAATCTTCTCCTGAACCTATCCGATTGACTGATC
TTGCGATTGAGATGCAGGTTACAAAGCCTTCAGCAACCACTATGGTTCAGAGACTAGAGAGAAAGGGGCTTGTTGAGCGT
AAAGTTTCGCTCGAAGATGCGAGGTCTAAGTTGGTCGTATTGACCAGCAAAGCTGAAGTCGGCTTAGAAGAAGAAAGTAA
GATCTATCAGGTCATGGCACAGATATTGGAAAGTCGTTTGTCTGAGCAAGAGTCTCAGCAGCTAAACCTGTTATTAAATA
AAGCTTTGAAGTAA

Upstream 100 bases:

>100_bases
ATAAACAGGTGGGGGGGGGGGGGGGCTCGTTTTTGATTGCTTTTTATTTAAACAACACTAAAATAGTTAGCCTTGCTAAC
TAAATGCCATTCTTGATTAG

Downstream 100 bases:

>100_bases
ATAATTTAGATATTTAGTTAGCCTTGTTAACTAATTTTTCGAGTCATATCTTGTTGATATGCGACTCACAGATGAAAGTA
GAGTAAGAAATGAGTAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSMLNQNLEKIERFASKIWRTQVNEDPICQLSFNEYDYLKVIQSSPEPIRLTDLAIEMQVTKPSATTMVQRLERKGLVER
KVSLEDARSKLVVLTSKAEVGLEEESKIYQVMAQILESRLSEQESQQLNLLLNKALK

Sequences:

>Translated_137_residues
MSMLNQNLEKIERFASKIWRTQVNEDPICQLSFNEYDYLKVIQSSPEPIRLTDLAIEMQVTKPSATTMVQRLERKGLVER
KVSLEDARSKLVVLTSKAEVGLEEESKIYQVMAQILESRLSEQESQQLNLLLNKALK
>Mature_136_residues
SMLNQNLEKIERFASKIWRTQVNEDPICQLSFNEYDYLKVIQSSPEPIRLTDLAIEMQVTKPSATTMVQRLERKGLVERK
VSLEDARSKLVVLTSKAEVGLEEESKIYQVMAQILESRLSEQESQQLNLLLNKALK

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15813; Mature: 15681

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLNQNLEKIERFASKIWRTQVNEDPICQLSFNEYDYLKVIQSSPEPIRLTDLAIEMQV
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEEEEEE
TKPSATTMVQRLERKGLVERKVSLEDARSKLVVLTSKAEVGLEEESKIYQVMAQILESRL
CCCHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
SEQESQQLNLLLNKALK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SMLNQNLEKIERFASKIWRTQVNEDPICQLSFNEYDYLKVIQSSPEPIRLTDLAIEMQV
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEEEEEE
TKPSATTMVQRLERKGLVERKVSLEDARSKLVVLTSKAEVGLEEESKIYQVMAQILESRL
CCCHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
SEQESQQLNLLLNKALK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA