| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yfgD [H]
Identifier: 218710278
GI number: 218710278
Start: 2479756
End: 2480106
Strand: Direct
Name: yfgD [H]
Synonym: VS_2312
Alternate gene names: 218710278
Gene position: 2479756-2480106 (Clockwise)
Preceding gene: 218710277
Following gene: 218710279
Centisome position: 75.16
GC content: 45.01
Gene sequence:
>351_bases ATGTCTGTCGTGATTTATCATAACCCACGCTGCTCAAAGAGCCGTCAAACTCTCGAACTGCTTGAAGCAAACGGCGTACA GCCAGAGGTGATCAAATACCTAGATACGCCTTTGACTATTGAACAGCTGAAAGTGCTTTTCACTCAGCTTGGTTTTGAGA GTGTTCGCGACATGATGCGTACCAAAGAAGCGGATTATAAAGAAGCGAACCTTGGTGACGCATCAGTGGCTGATGAAGAT CTTTTCGCTGCAATGGCAACGAATCCAAAACTGTTTGAACGTCCAGTGGTTGTCGCGAACAACAAAGCAAAAATTGGTCG TCCACCAGAACAAGTACTAGAGATTCTGTAA
Upstream 100 bases:
>100_bases CGTTGCCAAAATACAAAGAAAGCTCAACGTTACACAATAATAAGCCACTCAGTTGGCTTCGACTGAACTATTAAATCAAA AATAATAACGAGGAAGAACC
Downstream 100 bases:
>100_bases TCCAATATGAGCATCAACATTCTTGTTCTCTACTATAGTCGACACGGCAACACCCAAGCGCTAGCAAGGCAAATCGCTCG TGGGGTGGAATCCATCCCGA
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSVVIYHNPRCSKSRQTLELLEANGVQPEVIKYLDTPLTIEQLKVLFTQLGFESVRDMMRTKEADYKEANLGDASVADED LFAAMATNPKLFERPVVVANNKAKIGRPPEQVLEIL
Sequences:
>Translated_116_residues MSVVIYHNPRCSKSRQTLELLEANGVQPEVIKYLDTPLTIEQLKVLFTQLGFESVRDMMRTKEADYKEANLGDASVADED LFAAMATNPKLFERPVVVANNKAKIGRPPEQVLEIL >Mature_115_residues SVVIYHNPRCSKSRQTLELLEANGVQPEVIKYLDTPLTIEQLKVLFTQLGFESVRDMMRTKEADYKEANLGDASVADEDL FAAMATNPKLFERPVVVANNKAKIGRPPEQVLEIL
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788841, Length=114, Percent_Identity=62.280701754386, Blast_Score=148, Evalue=1e-37, Organism=Escherichia coli, GI1789918, Length=115, Percent_Identity=40, Blast_Score=89, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006659 - InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13048; Mature: 12917
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVIYHNPRCSKSRQTLELLEANGVQPEVIKYLDTPLTIEQLKVLFTQLGFESVRDMMR CEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHH TKEADYKEANLGDASVADEDLFAAMATNPKLFERPVVVANNKAKIGRPPEQVLEIL HCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCEEEECCCCCCCCCHHHHHHHC >Mature Secondary Structure SVVIYHNPRCSKSRQTLELLEANGVQPEVIKYLDTPLTIEQLKVLFTQLGFESVRDMMR EEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHH TKEADYKEANLGDASVADEDLFAAMATNPKLFERPVVVANNKAKIGRPPEQVLEIL HCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCEEEECCCCCCCCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]