| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is cysZ
Identifier: 218710255
GI number: 218710255
Start: 2459342
End: 2460100
Strand: Direct
Name: cysZ
Synonym: VS_2288
Alternate gene names: 218710255
Gene position: 2459342-2460100 (Clockwise)
Preceding gene: 218710249
Following gene: 218710256
Centisome position: 74.54
GC content: 42.29
Gene sequence:
>759_bases ATGACTATTGAATCTGTTCCTCGCTCTGGCTTTGGCTATTTTATTTTCGGAATAAAAATTGCCTTATCGCCGAGTATCCG TAAGTTTGTACTGCTTCCTCTTATCGCTAACGTGTTACTTGTGGGCGGTGCTTTATTTTATATTTTCTCCAACTTAAACA CTTGGATTGAAGGCTGGATTGGTGCATTGCCAAGTTTCTTGTCGTGGTTGTCATATATCCTATGGCCACTACTTGTGTTA ACCGTTTTGGCCACGTTTTCGTATTTCTTCAGTACACTCGCTAACTTTATTGCCGCACCTTTCAACGGATTACTCGCGGA AAAAGTCGAAGAACTGCTGAGTGGTAAAAAAGTCAATGATGATGGTTTACTGGATGTACTTAAAGACACCCCTCGTATTT TAGCAAGAGAATGGCGCAAGCTTGTCTATATCCTGCCAAAAGCGATCGGTTTGTTCCTACTTTTGTTAATTCCAGCGCTA GGACAAACTGTTGCACCGTTTTTATGGTTCATTTTCACTGCATGGATGTTAGCTATTCAGTACGCTGACTACCCGTTCGA CAACCATAAAATCAAGTTCGATGACATGAGAAATAATTTGAAACAAAAGCAAGGTAAGAGCTACAGCTTCGGCGCACTTG TTTCCGTGTTTACTACCATTCCAGTTTTAAACCTGATTGTGATGCCAGTTGCCGTCTGCGGCGCTACTGCAATGTGGGTT GCAGAGTTTAAAGACCAAGCCCTACGCTCTCGTCTATAG
Upstream 100 bases:
>100_bases TACTTGGTGTGATTTTCACCACGCTTTTTTTCTTAATTTCGGTCGAGTACACTAGAGATGTTTGCTATTTAACCAAATTC ACATGTGACCCAATTTAAAT
Downstream 100 bases:
>100_bases CTATCGCCTATAGTTCTACAGCCTGCTCTAACAACGCCTATCTTTTTGAAGTTCTGATTTCAATAAAGATAGGCGTGAAT CCTGCGACATCTCTATATGA
Product: putative sulfate transport protein CysZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTIESVPRSGFGYFIFGIKIALSPSIRKFVLLPLIANVLLVGGALFYIFSNLNTWIEGWIGALPSFLSWLSYILWPLLVL TVLATFSYFFSTLANFIAAPFNGLLAEKVEELLSGKKVNDDGLLDVLKDTPRILAREWRKLVYILPKAIGLFLLLLIPAL GQTVAPFLWFIFTAWMLAIQYADYPFDNHKIKFDDMRNNLKQKQGKSYSFGALVSVFTTIPVLNLIVMPVAVCGATAMWV AEFKDQALRSRL
Sequences:
>Translated_252_residues MTIESVPRSGFGYFIFGIKIALSPSIRKFVLLPLIANVLLVGGALFYIFSNLNTWIEGWIGALPSFLSWLSYILWPLLVL TVLATFSYFFSTLANFIAAPFNGLLAEKVEELLSGKKVNDDGLLDVLKDTPRILAREWRKLVYILPKAIGLFLLLLIPAL GQTVAPFLWFIFTAWMLAIQYADYPFDNHKIKFDDMRNNLKQKQGKSYSFGALVSVFTTIPVLNLIVMPVAVCGATAMWV AEFKDQALRSRL >Mature_251_residues TIESVPRSGFGYFIFGIKIALSPSIRKFVLLPLIANVLLVGGALFYIFSNLNTWIEGWIGALPSFLSWLSYILWPLLVLT VLATFSYFFSTLANFIAAPFNGLLAEKVEELLSGKKVNDDGLLDVLKDTPRILAREWRKLVYILPKAIGLFLLLLIPALG QTVAPFLWFIFTAWMLAIQYADYPFDNHKIKFDDMRNNLKQKQGKSYSFGALVSVFTTIPVLNLIVMPVAVCGATAMWVA EFKDQALRSRL
Specific function: Possibly involved in sulfate transport
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CysZ family
Homologues:
Organism=Escherichia coli, GI1788753, Length=250, Percent_Identity=55.6, Blast_Score=299, Evalue=1e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSZ_VIBSL (B7VIK5)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002417876.1 - GeneID: 7161830 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_2288 - HOGENOM: HBG644223 - OMA: FIAAPFN - ProtClustDB: PRK04949 - GO: GO:0006810 - HAMAP: MF_00468 - InterPro: IPR022985 - InterPro: IPR007496
Pfam domain/function: PF04401 DUF540
EC number: NA
Molecular weight: Translated: 28353; Mature: 28222
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1a1cdbe8)-; HASH(0x1b6e6474)-; HASH(0x1ca2ad10)-; HASH(0x1c62a7a4)-; HASH(0x1bfa90ac)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIESVPRSGFGYFIFGIKIALSPSIRKFVLLPLIANVLLVGGALFYIFSNLNTWIEGWI CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALPSFLSWLSYILWPLLVLTVLATFSYFFSTLANFIAAPFNGLLAEKVEELLSGKKVND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC DGLLDVLKDTPRILAREWRKLVYILPKAIGLFLLLLIPALGQTVAPFLWFIFTAWMLAIQ HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YADYPFDNHKIKFDDMRNNLKQKQGKSYSFGALVSVFTTIPVLNLIVMPVAVCGATAMWV HHCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEFKDQALRSRL HHHHHHHHHHCH >Mature Secondary Structure TIESVPRSGFGYFIFGIKIALSPSIRKFVLLPLIANVLLVGGALFYIFSNLNTWIEGWI CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALPSFLSWLSYILWPLLVLTVLATFSYFFSTLANFIAAPFNGLLAEKVEELLSGKKVND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC DGLLDVLKDTPRILAREWRKLVYILPKAIGLFLLLLIPALGQTVAPFLWFIFTAWMLAIQ HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YADYPFDNHKIKFDDMRNNLKQKQGKSYSFGALVSVFTTIPVLNLIVMPVAVCGATAMWV HHCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEFKDQALRSRL HHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA