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The map label for this gene is ybbJ [H]

Identifier: 218710249

GI number: 218710249

Start: 2451812

End: 2452267

Strand: Direct

Name: ybbJ [H]

Synonym: VS_2282

Alternate gene names: 218710249

Gene position: 2451812-2452267 (Clockwise)

Preceding gene: 218710248

Following gene: 218710255

Centisome position: 74.31

GC content: 46.71

Gene sequence:

>456_bases
ATGGTCGAATTGCTCGAACAAGTAAACTACTGGCATTGGTTAGCGTTTGGCCTAGCATTGTTAGCGCTTGAGCTAATTGG
AACCGCTGGTTACTTTTTATGGATAGGCATATCTGCCATGCTGGTCGGCGCCTTATTAGGCGCACTACCAATCGGTTGGC
AGATGCAATGGCTATCCTTTGCGAGCTTCTCGCTTATCACCACTTGGCTGTGGTGGAGAAGACAGCTATCTAGTGACAAG
CAATCTGACTCTACTCGAGACCTTAATCAGCGAGAGAAACAACTGATTGGAAGAAAGACTCGCCTGTTAGAGCCGGTACA
AAAAGGTAACTGCAGGATAAAGCTAGGGGATAGCTCATGGTCTGCGATGAGTACACATGATATTGATGCGGGAGAGGAAG
TCGTGATTACTGCTGTCGATGGCATTGTTCTCACGATAAGCCCTACTAAACAATAA

Upstream 100 bases:

>100_bases
CATCATGCTACCGCTCGAAGCGACTGGACTAATGGGTTCTGTTGCGGGTATTGCAGAGATGTTTGCACATAAGAATGACA
AGGGTAGTAAGGACTAACTT

Downstream 100 bases:

>100_bases
TCAAGAAAACCCTCCGTCAAAGCCATAAGTAACCAACTTATGGCTTTTTCTCTACAAGTGAATCGATAATTGGGCAATGG
CTATTTGAGTCACCAGGGCA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MVELLEQVNYWHWLAFGLALLALELIGTAGYFLWIGISAMLVGALLGALPIGWQMQWLSFASFSLITTWLWWRRQLSSDK
QSDSTRDLNQREKQLIGRKTRLLEPVQKGNCRIKLGDSSWSAMSTHDIDAGEEVVITAVDGIVLTISPTKQ

Sequences:

>Translated_151_residues
MVELLEQVNYWHWLAFGLALLALELIGTAGYFLWIGISAMLVGALLGALPIGWQMQWLSFASFSLITTWLWWRRQLSSDK
QSDSTRDLNQREKQLIGRKTRLLEPVQKGNCRIKLGDSSWSAMSTHDIDAGEEVVITAVDGIVLTISPTKQ
>Mature_151_residues
MVELLEQVNYWHWLAFGLALLALELIGTAGYFLWIGISAMLVGALLGALPIGWQMQWLSFASFSLITTWLWWRRQLSSDK
QSDSTRDLNQREKQLIGRKTRLLEPVQKGNCRIKLGDSSWSAMSTHDIDAGEEVVITAVDGIVLTISPTKQ

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=149, Percent_Identity=40.2684563758389, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 17019; Mature: 17019

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELLEQVNYWHWLAFGLALLALELIGTAGYFLWIGISAMLVGALLGALPIGWQMQWLSF
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ASFSLITTWLWWRRQLSSDKQSDSTRDLNQREKQLIGRKTRLLEPVQKGNCRIKLGDSSW
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
SAMSTHDIDAGEEVVITAVDGIVLTISPTKQ
CCCCCCCCCCCCEEEEEEECCEEEEEECCCC
>Mature Secondary Structure
MVELLEQVNYWHWLAFGLALLALELIGTAGYFLWIGISAMLVGALLGALPIGWQMQWLSF
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ASFSLITTWLWWRRQLSSDKQSDSTRDLNQREKQLIGRKTRLLEPVQKGNCRIKLGDSSW
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
SAMSTHDIDAGEEVVITAVDGIVLTISPTKQ
CCCCCCCCCCCCEEEEEEECCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]