| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is adk [H]
Identifier: 218710235
GI number: 218710235
Start: 2439342
End: 2439986
Strand: Reverse
Name: adk [H]
Synonym: VS_2268
Alternate gene names: 218710235
Gene position: 2439986-2439342 (Counterclockwise)
Preceding gene: 218710236
Following gene: 218710234
Centisome position: 73.95
GC content: 45.12
Gene sequence:
>645_bases ATGCGCATCATTCTTCTAGGTGCTCCTGGCGCGGGTAAAGGTACTCAAGCTAACTTCATCATGAACAAATTTGGTATCCC TCAAATTTCAACTGGTGACATGCTACGTGCTGCTATCAAAGCGGGTACTGAGCTTGGTAAGCAAGCAAAATCAGTAATCG ACGCTGGTCAGCTAGTTTCTGATGAAATTATCCTTGGTCTAATCAAAGAGCGTATCGCTCAAGATGACTGTGAGAAAGGT TTCCTACTAGACGGTTTCCCACGCACAATCCCTCAAGCTGATGGCCTAAAAGAAATGGGTATCGCAGTAGACTACGTTGT TGAATTCGACGTAGCTGACGATGTGATTGTTGAGCGTATGGCTGGTCGTCGTGCTCACCTTCCTTCTGGCCGTACATACC ACAATGTGTACAACCCGCCTAAAGAAGAAGGTAAAGATGACATCACTGGCGAAGAGCTAGTGGTTCGTGATGATGACAAA GAAGAAACAGTTCGTGCACGTCTAGGTGTATACCACGATCAAACAGCTCCGCTTATCTCTTACTACGGTAAAGAAGCTGA AGCAGGTAACACTAAGTACCTTAAGTTCGACGGTACTAAACAAGTTGCTGAAGTTAGTGCAGAACTTGAGAAAGCACTAG CATAA
Upstream 100 bases:
>100_bases CTCAGTTGTTACCTAACCTCTCTTGTTCGACTTAAATTGAACCAGAAAGGCGGGATAGTGAGCTTCGGTATAAATCATAA TTTTTATAAGAGGATTAAAC
Downstream 100 bases:
>100_bases TTGGCTAACAGCCAGTTTTAGAATTTGATATATTGGAAGCGACCTTAAGGTCGCTTTTTTTGTTTCAATTTTTAGTCATA TACCAATCTAGATAAACTCG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRIILLGAPGAGKGTQANFIMNKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDEIILGLIKERIAQDDCEKG FLLDGFPRTIPQADGLKEMGIAVDYVVEFDVADDVIVERMAGRRAHLPSGRTYHNVYNPPKEEGKDDITGEELVVRDDDK EETVRARLGVYHDQTAPLISYYGKEAEAGNTKYLKFDGTKQVAEVSAELEKALA
Sequences:
>Translated_214_residues MRIILLGAPGAGKGTQANFIMNKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDEIILGLIKERIAQDDCEKG FLLDGFPRTIPQADGLKEMGIAVDYVVEFDVADDVIVERMAGRRAHLPSGRTYHNVYNPPKEEGKDDITGEELVVRDDDK EETVRARLGVYHDQTAPLISYYGKEAEAGNTKYLKFDGTKQVAEVSAELEKALA >Mature_214_residues MRIILLGAPGAGKGTQANFIMNKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDEIILGLIKERIAQDDCEKG FLLDGFPRTIPQADGLKEMGIAVDYVVEFDVADDVIVERMAGRRAHLPSGRTYHNVYNPPKEEGKDDITGEELVVRDDDK EETVRARLGVYHDQTAPLISYYGKEAEAGNTKYLKFDGTKQVAEVSAELEKALA
Specific function: This small ubiquitous enzyme is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=188, Percent_Identity=50, Blast_Score=200, Evalue=7e-52, Organism=Homo sapiens, GI4502013, Length=188, Percent_Identity=50, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI19923437, Length=185, Percent_Identity=43.2432432432432, Blast_Score=162, Evalue=2e-40, Organism=Homo sapiens, GI310110345, Length=182, Percent_Identity=41.7582417582418, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI53832003, Length=182, Percent_Identity=41.7582417582418, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI8051579, Length=182, Percent_Identity=41.7582417582418, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI53832001, Length=182, Percent_Identity=41.7582417582418, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI4502011, Length=183, Percent_Identity=30.6010928961749, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI22749187, Length=183, Percent_Identity=29.5081967213115, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI28144897, Length=182, Percent_Identity=29.1208791208791, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI28144899, Length=182, Percent_Identity=29.1208791208791, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI7706497, Length=215, Percent_Identity=30.6976744186047, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI21450759, Length=139, Percent_Identity=25.1798561151079, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1786680, Length=213, Percent_Identity=74.1784037558685, Blast_Score=333, Evalue=7e-93, Organism=Caenorhabditis elegans, GI17552384, Length=218, Percent_Identity=44.4954128440367, Blast_Score=199, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17537943, Length=211, Percent_Identity=36.0189573459716, Blast_Score=123, Evalue=8e-29, Organism=Caenorhabditis elegans, GI17567503, Length=182, Percent_Identity=32.4175824175824, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17550688, Length=186, Percent_Identity=30.1075268817204, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17533833, Length=186, Percent_Identity=31.1827956989247, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320432, Length=189, Percent_Identity=48.1481481481481, Blast_Score=196, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6321018, Length=194, Percent_Identity=43.8144329896907, Blast_Score=146, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322828, Length=183, Percent_Identity=30.6010928961749, Blast_Score=93, Evalue=3e-20, Organism=Drosophila melanogaster, GI22026816, Length=211, Percent_Identity=44.0758293838863, Blast_Score=191, Evalue=3e-49, Organism=Drosophila melanogaster, GI17737899, Length=213, Percent_Identity=40.8450704225352, Blast_Score=151, Evalue=3e-37, Organism=Drosophila melanogaster, GI24645822, Length=213, Percent_Identity=40.8450704225352, Blast_Score=151, Evalue=3e-37, Organism=Drosophila melanogaster, GI17647141, Length=181, Percent_Identity=32.0441988950276, Blast_Score=101, Evalue=3e-22, Organism=Drosophila melanogaster, GI24663208, Length=181, Percent_Identity=32.0441988950276, Blast_Score=101, Evalue=3e-22, Organism=Drosophila melanogaster, GI221459597, Length=213, Percent_Identity=30.9859154929577, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI21356893, Length=213, Percent_Identity=30.9859154929577, Blast_Score=91, Evalue=5e-19,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 23325; Mature: 23325
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIILLGAPGAGKGTQANFIMNKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVS CEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIILGLIKERIAQDDCEKGFLLDGFPRTIPQADGLKEMGIAVDYVVEFDVADDVIVERM HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHCEEEEEEEEECCHHHHHHHHH AGRRAHLPSGRTYHNVYNPPKEEGKDDITGEELVVRDDDKEETVRARLGVYHDQTAPLIS CCCCCCCCCCCEECCCCCCCHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHH YYGKEAEAGNTKYLKFDGTKQVAEVSAELEKALA HCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIILLGAPGAGKGTQANFIMNKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVS CEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIILGLIKERIAQDDCEKGFLLDGFPRTIPQADGLKEMGIAVDYVVEFDVADDVIVERM HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHCEEEEEEEEECCHHHHHHHHH AGRRAHLPSGRTYHNVYNPPKEEGKDDITGEELVVRDDDKEETVRARLGVYHDQTAPLIS CCCCCCCCCCCEECCCCCCCHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHH YYGKEAEAGNTKYLKFDGTKQVAEVSAELEKALA HCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA