| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is htpG
Identifier: 218710236
GI number: 218710236
Start: 2440375
End: 2442279
Strand: Reverse
Name: htpG
Synonym: VS_2269
Alternate gene names: 218710236
Gene position: 2442279-2440375 (Counterclockwise)
Preceding gene: 218710240
Following gene: 218710235
Centisome position: 74.02
GC content: 44.67
Gene sequence:
>1905_bases ATGAGCGAAACGGCAACGCAAAATAAAGAGACTCGTGGCTTTCAATCTGAAGTAAAACAACTACTTCACCTAATGATTCA CTCACTGTATTCAAATAAAGAAATCTTCCTACGTGAGCTGATCTCTAACGCATCTGACGCGGCTGATAAGCTTCGTTTTC AAGCGCTATCAAATGGCGACCTTTACCAAGGCGATGCTGATTTAGGTGTGAAACTTTCGTTCAACGCTGAAGCAAATACT TTAACGATCTCTGATAACGGCATAGGTATGAGCCGCGACAACGTTATTGAGCATTTAGGTACTATTGCTAAGTCAGGCAC AGCTGACTTTTTCTCAAAGCTGTCTGAAGACCAAAGCAAAGACTCTCAGCTTATTGGCCAATTTGGTGTTGGTTTCTATT CTGCATTTATCGTTGCAGACGCAGTGACTGTTCGCACTCGAGCAGCTGGACTTGCTAATGACCAAGCCGTGCAATGGCAC TCTGCGGGTGAAGGTGATTACACTATCGAAGACATCACGAAAGAATCTCGTGGTACAGACATCATTCTTCATATGCGTGA AGACGGCAAAGAGTTCTTAAATGAATGGCGTCTGCGTGAAGTGATTGGTAAGTATTCTGATCACATCGGTATCCCTGTCT CCATCTTCACAGCGGTGAAAGATGACGAAGGTAAAGACACCGAAGAGAAGCATTGGGAGCAGATTAACAAGGCTCAAGCG CTTTGGACTCGTAACAAGTCTGATATCGAGAAAGAAGAGTACCAAGAGTTTTACAAGCACGTATCTCACGACTTTGCTGA TCCACTAACGTGGAGCCATAACAAAGTTGAAGGTAAGAACGACTACACAAGCCTACTTTACATCCCAGCTAAAGCACCTT GGGATATGATGAATCGTGACCATAAGAGCGGCCTTAAGCTTTATGTACAGCGCGTATTCATCATGGATGATGCAGAGCAG TTCATGCCATCTTACATGCGTTTCGTTCGCGGCTTGATTGATTCAAACGATTTACCACTGAACGTGTCTCGTGAAATCCT GCAAGATAATAAGGTGACTCAGTCTCTTCGTGGCGCATGTACCAAGCGTGTACTCACTATGCTTGAGCGCATGGCGAAGA ATGACAACGACAAGTACTTGGAGTTTTGGAAAGAGTTCGGCCTAGTACTGAAAGAAGGCCCTGCTGAAGACATGGCGAAC AAAGAAAAAATCGCAGGTCTACTTCGTTTCTCATCAACAGAAGTGGATTCTTCTGAACAAACTATCGGCCTAGCATCTTA CGTTGAGCGCATGAAAGAAGGCCAAGACAAGATCTATTACCTAACAGCAGATAGTTACGCTGCCGCTAAGAACAGCCCAC ACTTAGAGCAGTTCAAAGCAAAAGGTATCGAAGTTGTTCTCATGTACGATCGTATCGATGAGTACGTAATGAATTACCTG ACTGACTTCGACGGTAAACAGTTCCAATCGATCACTAAAGCAGGCTTAGACCTAAGCAAGTTTGAAGGTGAAGAAGAGAA AGAGAAGCAAAAAGAGACAGAAGAAGAGTTCAAATCTGTTGTTGAGCGCACTCAATCTTACCTAGGTGGTCGTGTTAAAG AAGTTCGTACTACTTTCAAGCTCGCAACAACACCTGCCGTTGTGGTGACTGATGACTTCGAAATGGGCACGCAAATGGCT AAGCTTCTTGAAGCTGCGGGTCAAGCGGCACCTGAAGTGAAGTACATCTTTGAGATTAACCCTGAGCACGCACTTGTGAA ACAGATGGCTGATGAAGCGGACGAACAAGCGTTTGGTCGTTGGGTTGAGCTACTACTTGGTCAAGCTATGCTGGCTGAAA AGGGCTCAATGGAAGATCCGTCACAATTCTTAGGTGCAATCAACGAACTACTGACAAAACGTTAG
Upstream 100 bases:
>100_bases ATTTACATTTGTCATCCTCATGTTAATGAACAGAAGAGAGGCATAATGTGCAATGCCCCTATGATTATTCAACATAAAGT ATAGATGTTTTGGAGTAAAA
Downstream 100 bases:
>100_bases TCTTTCGACTTTGGGCTAAGCTCATAATTATAATTAAAAGCTCGCTAATGCGGGCTTTTTTTATGAACGTCGCTTAACTT CATCGAAATGTCGCTAAAGT
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MSETATQNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSNGDLYQGDADLGVKLSFNAEANT LTISDNGIGMSRDNVIEHLGTIAKSGTADFFSKLSEDQSKDSQLIGQFGVGFYSAFIVADAVTVRTRAAGLANDQAVQWH SAGEGDYTIEDITKESRGTDIILHMREDGKEFLNEWRLREVIGKYSDHIGIPVSIFTAVKDDEGKDTEEKHWEQINKAQA LWTRNKSDIEKEEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPWDMMNRDHKSGLKLYVQRVFIMDDAEQ FMPSYMRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGACTKRVLTMLERMAKNDNDKYLEFWKEFGLVLKEGPAEDMAN KEKIAGLLRFSSTEVDSSEQTIGLASYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGIEVVLMYDRIDEYVMNYL TDFDGKQFQSITKAGLDLSKFEGEEEKEKQKETEEEFKSVVERTQSYLGGRVKEVRTTFKLATTPAVVVTDDFEMGTQMA KLLEAAGQAAPEVKYIFEINPEHALVKQMADEADEQAFGRWVELLLGQAMLAEKGSMEDPSQFLGAINELLTKR
Sequences:
>Translated_634_residues MSETATQNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSNGDLYQGDADLGVKLSFNAEANT LTISDNGIGMSRDNVIEHLGTIAKSGTADFFSKLSEDQSKDSQLIGQFGVGFYSAFIVADAVTVRTRAAGLANDQAVQWH SAGEGDYTIEDITKESRGTDIILHMREDGKEFLNEWRLREVIGKYSDHIGIPVSIFTAVKDDEGKDTEEKHWEQINKAQA LWTRNKSDIEKEEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPWDMMNRDHKSGLKLYVQRVFIMDDAEQ FMPSYMRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGACTKRVLTMLERMAKNDNDKYLEFWKEFGLVLKEGPAEDMAN KEKIAGLLRFSSTEVDSSEQTIGLASYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGIEVVLMYDRIDEYVMNYL TDFDGKQFQSITKAGLDLSKFEGEEEKEKQKETEEEFKSVVERTQSYLGGRVKEVRTTFKLATTPAVVVTDDFEMGTQMA KLLEAAGQAAPEVKYIFEINPEHALVKQMADEADEQAFGRWVELLLGQAMLAEKGSMEDPSQFLGAINELLTKR >Mature_633_residues SETATQNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSNGDLYQGDADLGVKLSFNAEANTL TISDNGIGMSRDNVIEHLGTIAKSGTADFFSKLSEDQSKDSQLIGQFGVGFYSAFIVADAVTVRTRAAGLANDQAVQWHS AGEGDYTIEDITKESRGTDIILHMREDGKEFLNEWRLREVIGKYSDHIGIPVSIFTAVKDDEGKDTEEKHWEQINKAQAL WTRNKSDIEKEEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPWDMMNRDHKSGLKLYVQRVFIMDDAEQF MPSYMRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGACTKRVLTMLERMAKNDNDKYLEFWKEFGLVLKEGPAEDMANK EKIAGLLRFSSTEVDSSEQTIGLASYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGIEVVLMYDRIDEYVMNYLT DFDGKQFQSITKAGLDLSKFEGEEEKEKQKETEEEFKSVVERTQSYLGGRVKEVRTTFKLATTPAVVVTDDFEMGTQMAK LLEAAGQAAPEVKYIFEINPEHALVKQMADEADEQAFGRWVELLLGQAMLAEKGSMEDPSQFLGAINELLTKR
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI20149594, Length=670, Percent_Identity=36.5671641791045, Blast_Score=408, Evalue=1e-114, Organism=Homo sapiens, GI4507677, Length=645, Percent_Identity=35.968992248062, Blast_Score=398, Evalue=1e-111, Organism=Homo sapiens, GI155722983, Length=634, Percent_Identity=36.1198738170347, Blast_Score=389, Evalue=1e-108, Organism=Homo sapiens, GI154146191, Length=410, Percent_Identity=35.8536585365854, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI153792590, Length=410, Percent_Identity=35.8536585365854, Blast_Score=251, Evalue=1e-66, Organism=Escherichia coli, GI1786679, Length=627, Percent_Identity=68.4210526315789, Blast_Score=889, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=672, Percent_Identity=36.6071428571429, Blast_Score=439, Evalue=1e-123, Organism=Caenorhabditis elegans, GI17542208, Length=685, Percent_Identity=35.6204379562044, Blast_Score=398, Evalue=1e-111, Organism=Caenorhabditis elegans, GI115535205, Length=639, Percent_Identity=33.9593114241002, Blast_Score=335, Evalue=5e-92, Organism=Caenorhabditis elegans, GI115535167, Length=427, Percent_Identity=36.5339578454333, Blast_Score=270, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6323840, Length=683, Percent_Identity=36.0175695461201, Blast_Score=425, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6325016, Length=209, Percent_Identity=44.0191387559809, Blast_Score=175, Evalue=2e-44, Organism=Drosophila melanogaster, GI17647529, Length=671, Percent_Identity=37.5558867362146, Blast_Score=447, Evalue=1e-125, Organism=Drosophila melanogaster, GI21357739, Length=681, Percent_Identity=36.2701908957416, Blast_Score=404, Evalue=1e-113, Organism=Drosophila melanogaster, GI24586016, Length=666, Percent_Identity=33.033033033033, Blast_Score=363, Evalue=1e-100,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_VIBSL (B7VII6)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002417857.1 - GeneID: 7161811 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_2269 - HOGENOM: HBG631012 - OMA: AIYYITA - ProtClustDB: PRK05218 - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 71916; Mature: 71784
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETATQNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSNGD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC LYQGDADLGVKLSFNAEANTLTISDNGIGMSRDNVIEHLGTIAKSGTADFFSKLSEDQSK CCCCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCH DSQLIGQFGVGFYSAFIVADAVTVRTRAAGLANDQAVQWHSAGEGDYTIEDITKESRGTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEHHHHHHCCCCCE IILHMREDGKEFLNEWRLREVIGKYSDHIGIPVSIFTAVKDDEGKDTEEKHWEQINKAQA EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH LWTRNKSDIEKEEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPWDMMNRD HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCC HKSGLKLYVQRVFIMDDAEQFMPSYMRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGAC HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH TKRVLTMLERMAKNDNDKYLEFWKEFGLVLKEGPAEDMANKEKIAGLLRFSSTEVDSSEQ HHHHHHHHHHHHCCCCHHHHHHHHHHCHHCCCCCCHHHCCHHHHHHHHHHCCCCCCCCHH TIGLASYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGIEVVLMYDRIDEYVMNYL HHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCHHHHHHCCEEEEEEHHHHHHHHHHHH TDFDGKQFQSITKAGLDLSKFEGEEEKEKQKETEEEFKSVVERTQSYLGGRVKEVRTTFK HCCCCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LATTPAVVVTDDFEMGTQMAKLLEAAGQAAPEVKYIFEINPEHALVKQMADEADEQAFGR EECCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH WVELLLGQAMLAEKGSMEDPSQFLGAINELLTKR HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SETATQNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSNGD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC LYQGDADLGVKLSFNAEANTLTISDNGIGMSRDNVIEHLGTIAKSGTADFFSKLSEDQSK CCCCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCH DSQLIGQFGVGFYSAFIVADAVTVRTRAAGLANDQAVQWHSAGEGDYTIEDITKESRGTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEHHHHHHCCCCCE IILHMREDGKEFLNEWRLREVIGKYSDHIGIPVSIFTAVKDDEGKDTEEKHWEQINKAQA EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH LWTRNKSDIEKEEYQEFYKHVSHDFADPLTWSHNKVEGKNDYTSLLYIPAKAPWDMMNRD HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCC HKSGLKLYVQRVFIMDDAEQFMPSYMRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGAC HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH TKRVLTMLERMAKNDNDKYLEFWKEFGLVLKEGPAEDMANKEKIAGLLRFSSTEVDSSEQ HHHHHHHHHHHHCCCCHHHHHHHHHHCHHCCCCCCHHHCCHHHHHHHHHHCCCCCCCCHH TIGLASYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGIEVVLMYDRIDEYVMNYL HHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCHHHHHHCCEEEEEEHHHHHHHHHHHH TDFDGKQFQSITKAGLDLSKFEGEEEKEKQKETEEEFKSVVERTQSYLGGRVKEVRTTFK HCCCCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LATTPAVVVTDDFEMGTQMAKLLEAAGQAAPEVKYIFEINPEHALVKQMADEADEQAFGR EECCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH WVELLLGQAMLAEKGSMEDPSQFLGAINELLTKR HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA