| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is fldA [H]
Identifier: 218710223
GI number: 218710223
Start: 2423594
End: 2424127
Strand: Direct
Name: fldA [H]
Synonym: VS_2256
Alternate gene names: 218710223
Gene position: 2423594-2424127 (Clockwise)
Preceding gene: 218710222
Following gene: 218710225
Centisome position: 73.46
GC content: 44.57
Gene sequence:
>534_bases ATGGCAAGTGTAGGTCTCTTCTTTGGTAGCGATACAGGTAACACTGAAGCTGTTGCTAAGATGATTCAAAAGCAATTGGG CAAGCAGCTCGTTCAAGTTCAAGACATTGCAAAAAGCAGCAAAGAAGATATCGATAACTTCGATCTGCTGCTGCTTGGTA TCCCTACGTGGTACTACGGCGAAGCACAATGTGATTGGGATGACTTTTTCCCTGAGCTAGAAGCTATTGATTTCTCAACT AAGCTTGTTGCTATTTTTGGTTGTGGCGACCAAGAAGATTACGCAGAATACTTCTGCGATGCTATGGGTACTATCCGCGA TATCGTTGAAGCAAAAGGCGGTACTATCCTAGGTCACACGTCAACTGAAGGCTACGAATTCGAAGCATCGAAAGGTTTAG TTGAAGGCGATGACAGCCAGTTCGTTGGTCTATGTATCGATGAAGACCGTCAACCTGAGCTGACTGATGAGCGTGTATCT AACTGGGTTAAACAAATCCACGAAGAGATGTGCCTAGCAGAGCTTGAAGACTAA
Upstream 100 bases:
>100_bases AAAAGGGATAATCCAACTAAGCTGGGAAGGAACTGGAATCTAACGATTTCCTCCGAACTTTATTACACCGACAACAGACA AAATGAAAGGTAATGATTCT
Downstream 100 bases:
>100_bases TTCATTAGCGGTCATTAATTGTTACAATTAATGACCGTTATGTAGATATGAAAAAACCTCCTTATAGGAGGTTTTTTTCT ATTCAATATTTATCAATCAA
Product: flavodoxin FldA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MASVGLFFGSDTGNTEAVAKMIQKQLGKQLVQVQDIAKSSKEDIDNFDLLLLGIPTWYYGEAQCDWDDFFPELEAIDFST KLVAIFGCGDQEDYAEYFCDAMGTIRDIVEAKGGTILGHTSTEGYEFEASKGLVEGDDSQFVGLCIDEDRQPELTDERVS NWVKQIHEEMCLAELED
Sequences:
>Translated_177_residues MASVGLFFGSDTGNTEAVAKMIQKQLGKQLVQVQDIAKSSKEDIDNFDLLLLGIPTWYYGEAQCDWDDFFPELEAIDFST KLVAIFGCGDQEDYAEYFCDAMGTIRDIVEAKGGTILGHTSTEGYEFEASKGLVEGDDSQFVGLCIDEDRQPELTDERVS NWVKQIHEEMCLAELED >Mature_176_residues ASVGLFFGSDTGNTEAVAKMIQKQLGKQLVQVQDIAKSSKEDIDNFDLLLLGIPTWYYGEAQCDWDDFFPELEAIDFSTK LVAIFGCGDQEDYAEYFCDAMGTIRDIVEAKGGTILGHTSTEGYEFEASKGLVEGDDSQFVGLCIDEDRQPELTDERVSN WVKQIHEEMCLAELED
Specific function: Low-potential electron donor to a number of redox enzymes (Potential). Involved in the reactivation of inactive cob(II)alamin in methionine synthase [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1786900, Length=175, Percent_Identity=74.8571428571429, Blast_Score=273, Evalue=7e-75, Organism=Escherichia coli, GI1789262, Length=169, Percent_Identity=40.8284023668639, Blast_Score=142, Evalue=1e-35,
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 19749; Mature: 19618
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVGLFFGSDTGNTEAVAKMIQKQLGKQLVQVQDIAKSSKEDIDNFDLLLLGIPTWYYG CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECC EAQCDWDDFFPELEAIDFSTKLVAIFGCGDQEDYAEYFCDAMGTIRDIVEAKGGTILGHT CCCCCHHHHCCCHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC STEGYEFEASKGLVEGDDSQFVGLCIDEDRQPELTDERVSNWVKQIHEEMCLAELED CCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASVGLFFGSDTGNTEAVAKMIQKQLGKQLVQVQDIAKSSKEDIDNFDLLLLGIPTWYYG CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECC EAQCDWDDFFPELEAIDFSTKLVAIFGCGDQEDYAEYFCDAMGTIRDIVEAKGGTILGHT CCCCCHHHHCCCHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC STEGYEFEASKGLVEGDDSQFVGLCIDEDRQPELTDERVSNWVKQIHEEMCLAELED CCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]