Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218710222

Identifier: 218710222

GI number: 218710222

Start: 2423310

End: 2423420

Strand: Direct

Name: 218710222

Synonym: VS_2255

Alternate gene names: NA

Gene position: 2423310-2423420 (Clockwise)

Preceding gene: 218710221

Following gene: 218710223

Centisome position: 73.45

GC content: 36.04

Gene sequence:

>111_bases
ATGCTTTACGACTACATGAACATCATTGAATCTGTTGGTTTAGATCTTCTGTTTGCCGCGATTTTCTTTCTAATCGGAAT
GGCAATTAAAGTACTCCATGATTTCGTTTAG

Upstream 100 bases:

>100_bases
ATTAGTCGATATAAATGAGAGCTGTGTAATCACAGCAGATTAACTTTATCTCACAACAGTGATATAGTGCGCCCAAGCAA
ATTTGGTATATAAGGTTCCC

Downstream 100 bases:

>100_bases
ACATACTACAGATGTCTGCATTGGTGTCGTATCGTATGGTTAGTACTTTTCCTTGGTGCGCAGGCTTTATCGCAAAAGGG
ATAATCCAACTAAGCTGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 36; Mature: 36

Protein sequence:

>36_residues
MLYDYMNIIESVGLDLLFAAIFFLIGMAIKVLHDFV

Sequences:

>Translated_36_residues
MLYDYMNIIESVGLDLLFAAIFFLIGMAIKVLHDFV
>Mature_36_residues
MLYDYMNIIESVGLDLLFAAIFFLIGMAIKVLHDFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4137; Mature: 4137

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYDYMNIIESVGLDLLFAAIFFLIGMAIKVLHDFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLYDYMNIIESVGLDLLFAAIFFLIGMAIKVLHDFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA