| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218710122
Identifier: 218710122
GI number: 218710122
Start: 2300970
End: 2301356
Strand: Direct
Name: 218710122
Synonym: VS_2143
Alternate gene names: NA
Gene position: 2300970-2301356 (Clockwise)
Preceding gene: 218710120
Following gene: 218710124
Centisome position: 69.74
GC content: 46.77
Gene sequence:
>387_bases ATGACACAACTTACGATATTTTACGATGGGACATGCCCGTTGTGCGCAAAGGAGATGGCGGCACTTGCAAAGCATGATGT CGAGAATAAGATTCAAACCATCGATATCTACAGTGAAGCCTTTTCAGACTACCCTCAAATTGATGCCGACTCAGCCAACA CCGTTTTGCATGCACTGGATGAGAATGGAAAACTGCTGCTAGGTTTAGACGTGACCTACCAAGCGTGGCGCTTAGTAGGA AAAGGCTGGCTATACGCCCCATTGCGTTGGGCGATATTCAAGCCAGTGGCCGATTGGTGTTATTTACGATTTGCCAAGAA CCGATATAAAGTCTCTTTCTGGCTAACTGGAAAGTCACGCTGCGATGGTAACAGCTGCTCAAAATAG
Upstream 100 bases:
>100_bases AGCCATTGCTAGATTATTGAATAACAAGCGATTGAATTGACGGGTGCCGACTTAACAAGTAACTAAAGGCTCAACTACTG AAATGACAGGCGAACAGACG
Downstream 100 bases:
>100_bases TACTTGGCTAAGACATACCACTTGCGACTTTGTAATACACCACACCAAACAGCGCAGCAAAAACTAAAACGGTAACCGCG ACTTTTAACCAAATAAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: Potential Redox Protein; Thiol-Disulfide Oxidoreductase DCC; Redox Protein; Inhibitor
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTQLTIFYDGTCPLCAKEMAALAKHDVENKIQTIDIYSEAFSDYPQIDADSANTVLHALDENGKLLLGLDVTYQAWRLVG KGWLYAPLRWAIFKPVADWCYLRFAKNRYKVSFWLTGKSRCDGNSCSK
Sequences:
>Translated_128_residues MTQLTIFYDGTCPLCAKEMAALAKHDVENKIQTIDIYSEAFSDYPQIDADSANTVLHALDENGKLLLGLDVTYQAWRLVG KGWLYAPLRWAIFKPVADWCYLRFAKNRYKVSFWLTGKSRCDGNSCSK >Mature_127_residues TQLTIFYDGTCPLCAKEMAALAKHDVENKIQTIDIYSEAFSDYPQIDADSANTVLHALDENGKLLLGLDVTYQAWRLVGK GWLYAPLRWAIFKPVADWCYLRFAKNRYKVSFWLTGKSRCDGNSCSK
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14580; Mature: 14449
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLTIFYDGTCPLCAKEMAALAKHDVENKIQTIDIYSEAFSDYPQIDADSANTVLHALD CCEEEEEECCCCCHHHHHHHHHHHHCCCCHHEEEEEHHHHHCCCCCCCCCCCCCEEEEEC ENGKLLLGLDVTYQAWRLVGKGWLYAPLRWAIFKPVADWCYLRFAKNRYKVSFWLTGKSR CCCCEEEEECCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCC CDGNSCSK CCCCCCCC >Mature Secondary Structure TQLTIFYDGTCPLCAKEMAALAKHDVENKIQTIDIYSEAFSDYPQIDADSANTVLHALD CEEEEEECCCCCHHHHHHHHHHHHCCCCHHEEEEEHHHHHCCCCCCCCCCCCCEEEEEC ENGKLLLGLDVTYQAWRLVGKGWLYAPLRWAIFKPVADWCYLRFAKNRYKVSFWLTGKSR CCCCEEEEECCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCC CDGNSCSK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA