| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710104
Identifier: 218710104
GI number: 218710104
Start: 2284883
End: 2285386
Strand: Reverse
Name: 218710104
Synonym: VS_2125
Alternate gene names: NA
Gene position: 2285386-2284883 (Counterclockwise)
Preceding gene: 218710107
Following gene: 218710103
Centisome position: 69.27
GC content: 45.24
Gene sequence:
>504_bases TTGGAGCAAGTTATGAAAATGAATCACGTAGGCATCATGGTGGGCGACATGGACAAAGCAGTCGAGTTTTACACGAAAGC GCTAGGTCTAAGAATCGTAATGAACAACACTAAAGTGATGGAAGAGCGCGAATCAGCAATCGGCCGTATGTGTATCGCTG TGTTCGGTGAAGGCTTTAAAGGCTTCAACATTGCACACCTAGTCACATCTGATGGTATCGGTGTTGAGCTGTTTGAAATG AAAGAGCGCCAAGAGCGTCACGAAGTTGATTTCTCTCGCTTAGGTATCTTCCACTTCTGCCTACAACTTCCAAAAGAGCA GTTTCATTCAGCTATCAAGCGCGTTGAAGAGTTTGGCGGTAAGGTTCGTATGGACATCATGCGTTACCACCCAGAAGACG AACTAAAACAAGCGCAAATGGTTTATCTAGAAGACCCGTTTGGCAACCTATTCGAATTCTACTCGCACACATACGAAGAC ACGTACGCGACTGATTACGAGTAA
Upstream 100 bases:
>100_bases ATTATGATAATTTCATTTAATCGTCGTATCTCCATATACTCTCTTCATCGAAACGAAACATCGAAGCTAGACTTCGAAAA GCACAGAATTTAAAACGAAT
Downstream 100 bases:
>100_bases TCGCGTTACCTGCCTGTCATAAGGTAGAAAACCGAAACACCCCCTAAAGAGGATTGGTAGAGATACCAATCCTTTTTTGT GTTTGGATGTTTGGTTGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Lactoylglutathione Lyase Family Protein; Dioxygenase Superfamily Protein
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MEQVMKMNHVGIMVGDMDKAVEFYTKALGLRIVMNNTKVMEERESAIGRMCIAVFGEGFKGFNIAHLVTSDGIGVELFEM KERQERHEVDFSRLGIFHFCLQLPKEQFHSAIKRVEEFGGKVRMDIMRYHPEDELKQAQMVYLEDPFGNLFEFYSHTYED TYATDYE
Sequences:
>Translated_167_residues MEQVMKMNHVGIMVGDMDKAVEFYTKALGLRIVMNNTKVMEERESAIGRMCIAVFGEGFKGFNIAHLVTSDGIGVELFEM KERQERHEVDFSRLGIFHFCLQLPKEQFHSAIKRVEEFGGKVRMDIMRYHPEDELKQAQMVYLEDPFGNLFEFYSHTYED TYATDYE >Mature_167_residues MEQVMKMNHVGIMVGDMDKAVEFYTKALGLRIVMNNTKVMEERESAIGRMCIAVFGEGFKGFNIAHLVTSDGIGVELFEM KERQERHEVDFSRLGIFHFCLQLPKEQFHSAIKRVEEFGGKVRMDIMRYHPEDELKQAQMVYLEDPFGNLFEFYSHTYED TYATDYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19542; Mature: 19542
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00934 GLYOXALASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQVMKMNHVGIMVGDMDKAVEFYTKALGLRIVMNNTKVMEERESAIGRMCIAVFGEGFK CCCHHHHCCCEEEECCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC GFNIAHLVTSDGIGVELFEMKERQERHEVDFSRLGIFHFCLQLPKEQFHSAIKRVEEFGG CCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC KVRMDIMRYHPEDELKQAQMVYLEDPFGNLFEFYSHTYEDTYATDYE EEEEHHHHCCCHHHHHHHHEEEEECCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEQVMKMNHVGIMVGDMDKAVEFYTKALGLRIVMNNTKVMEERESAIGRMCIAVFGEGFK CCCHHHHCCCEEEECCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC GFNIAHLVTSDGIGVELFEMKERQERHEVDFSRLGIFHFCLQLPKEQFHSAIKRVEEFGG CCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC KVRMDIMRYHPEDELKQAQMVYLEDPFGNLFEFYSHTYEDTYATDYE EEEEHHHHCCCHHHHHHHHEEEEECCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA