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The map label for this gene is ychJ [C]

Identifier: 218709999

GI number: 218709999

Start: 2164841

End: 2165356

Strand: Direct

Name: ychJ [C]

Synonym: VS_2018

Alternate gene names: 218709999

Gene position: 2164841-2165356 (Clockwise)

Preceding gene: 218709998

Following gene: 218710009

Centisome position: 65.62

GC content: 46.51

Gene sequence:

>516_bases
ATGTCTTTATGCCCATGCGGTAGCAAAAATACTTACCAACAGTGCTGTGAATCAGCGCACCTTCACCACAGTGCTGTTGA
AACGCCTGAACAGTTGATGCGCTCACGTTATTCAGCGCACGTGTTGGGTTTGGTTGACTATGTTGTTGCGACTTACCACC
CTAGCTGCAACGCAGAAGCGCAAAGAGAAGGTATTGCCGAATCTATCGACAGTGATTGGGCAGGACTAGAAGTCATCGAT
ACTGAGGCAGGCTCACACCAAGACGAAGGCTTTGTTGAGTTTAAAGCTTACTTCAATGAAGAAGGCGCACAATACTGCAT
GCAAGAGCGCTCGCGCTTTATACGTAAAGACGACTTGTGGTACTACATTGATGGCACTTTCCCCGAGCAAGGAAATGAGC
AAGAAGAACCTGAAATTGACCCACGCTTAAATCAAACCGTTGAGAACTTTAAAATCGGCCGTAATGATCCGTGTATTTGT
GGCAGTGGTAAGAAATACAAGAAGTGCTGCGGGTAA

Upstream 100 bases:

>100_bases
TTCAATCGAAACTCAGCTTTGGTGAACAGTCGTTTCTTGATAAACTCCAACACATTCATTTATGGCCTCTTAACAGAGGC
CATTTTTACAGGATTTGACC

Downstream 100 bases:

>100_bases
CTCGTTCGACTAAGAAGTCAGATGAAGAGAAGAGATTCCTGATGTCGCTTAGGCTCCTCGGAATGACGTAAAGTCAGAGG
TTAGAAAAGTGACGCAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSLCPCGSKNTYQQCCESAHLHHSAVETPEQLMRSRYSAHVLGLVDYVVATYHPSCNAEAQREGIAESIDSDWAGLEVID
TEAGSHQDEGFVEFKAYFNEEGAQYCMQERSRFIRKDDLWYYIDGTFPEQGNEQEEPEIDPRLNQTVENFKIGRNDPCIC
GSGKKYKKCCG

Sequences:

>Translated_171_residues
MSLCPCGSKNTYQQCCESAHLHHSAVETPEQLMRSRYSAHVLGLVDYVVATYHPSCNAEAQREGIAESIDSDWAGLEVID
TEAGSHQDEGFVEFKAYFNEEGAQYCMQERSRFIRKDDLWYYIDGTFPEQGNEQEEPEIDPRLNQTVENFKIGRNDPCIC
GSGKKYKKCCG
>Mature_170_residues
SLCPCGSKNTYQQCCESAHLHHSAVETPEQLMRSRYSAHVLGLVDYVVATYHPSCNAEAQREGIAESIDSDWAGLEVIDT
EAGSHQDEGFVEFKAYFNEEGAQYCMQERSRFIRKDDLWYYIDGTFPEQGNEQEEPEIDPRLNQTVENFKIGRNDPCICG
SGKKYKKCCG

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=170, Percent_Identity=42.9411764705882, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 19408; Mature: 19276

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLCPCGSKNTYQQCCESAHLHHSAVETPEQLMRSRYSAHVLGLVDYVVATYHPSCNAEA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
QREGIAESIDSDWAGLEVIDTEAGSHQDEGFVEFKAYFNEEGAQYCMQERSRFIRKDDLW
HHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCEE
YYIDGTFPEQGNEQEEPEIDPRLNQTVENFKIGRNDPCICGSGKKYKKCCG
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCHHHHHCC
>Mature Secondary Structure 
SLCPCGSKNTYQQCCESAHLHHSAVETPEQLMRSRYSAHVLGLVDYVVATYHPSCNAEA
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
QREGIAESIDSDWAGLEVIDTEAGSHQDEGFVEFKAYFNEEGAQYCMQERSRFIRKDDLW
HHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCEE
YYIDGTFPEQGNEQEEPEIDPRLNQTVENFKIGRNDPCICGSGKKYKKCCG
EEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]