Click here to switch to the map view.

The map label for this gene is yuxH [H]

Identifier: 218709998

GI number: 218709998

Start: 2163505

End: 2164722

Strand: Direct

Name: yuxH [H]

Synonym: VS_2017

Alternate gene names: 218709998

Gene position: 2163505-2164722 (Clockwise)

Preceding gene: 218709997

Following gene: 218709999

Centisome position: 65.57

GC content: 44.66

Gene sequence:

>1218_bases
TTGAAATATTCATACGTAGCGCGTCAACCAATACTCGATGCAGACAAGAAGACCATAGGTTACGAGTTGCTATTTAGGGA
TGGCCCTAAGAACACTTTCCCTGAAGTAGAGCCGGAGCTCGCTACTAGCCGTTTGCTTTCCGACCACTTCTTATCTACCC
ACTATAATACATTGGGCGATAAGCTTGGATTCGTTAATTTTCCATATGCAAGCTTGGTTAACCTAGTCCCGACTCTATTT
CCGAAAGAGAGCTTAGTTGTCGAGGTACTGGAAGACTGTGAGCCAACAGACGAACTGCTAGAAGCCATCATCACAATTTA
TGATGCGGGTTACACGATCGCGTTAGATGACTTTGTGCCTAGCAAAGCATGGAAACGCTTCTTACCTTACGTATCAATTA
TCAAATTCGACATACGTTTGATCTCAATAGCTAAAGCTGCGATGTTCATGAACACTCTGAAAGACTTGAATATCGAGTTT
CTAGCGGAGAAAGTAGAAACTCACGAAGAATACCAAGAAGCAATCCAAGCCGGGTTTAACTACTTTCAAGGCTACTTTTT
CAGTAAGCCGGAGATGATCCAAACTCGCGCATTAAACCCTGCTTTTTTAACCATTGTTCAACTGTTGAAAGAGATTGCCA
ACGACCCTATCAACTTTGCCGAAGTAGAGCGTTTGATTACCCTTGATATGACCATGTCGTATAAGCTGCTCTCTTACGTA
AACTCCGCAGGTGGCTCATCAACACCGATTCGTTCATTCCACCAAGCGCTTGTTTATCTTGGTGAACAAAAACTACGTAA
GCTAGTGTCACTGGTTGCTATCGCATCCGCGAAAGAAGATAAACCAGACTCACTTTATGGTTTAGCTGTGATACGCGCGC
GCCAATGTGAACTGTTGGTCGAGAAAATGAACGTTAAGGTTGAGCCCGGGCAAGCCTTTTTAACTGGCATGTTCTCGCTG
CTCGACTCCCTATTCGATCTGCCGTTAGTAAAAGTACTGGACTCGGTGCCGATCGATGATGAGATTAAACAAGCCTTGAT
TGAGCGCAAGGGTATATTAGGTGCCATTTTGGCGATGGTCATAGCTTATGAACAAGCTCGCTGGGATGAAGCAACGCGCA
TTCGTAAACTGCTCAAACTCAACGAAGCAGAGCTAGGTCAAGCTTATGACGAAGCAACTTCTTGGGCCCAAGACCTGCTG
TCTCCTACTTTGAAATAG

Upstream 100 bases:

>100_bases
TATTATTATCATCGGTCAGATTTTCTTCACTTGTATATGGTAATTTCTCCTGAATTAGCTATTATTTGTCTATCAAAAAT
AAACCGAACACAGTACCAAG

Downstream 100 bases:

>100_bases
TTCACGTCACACAGCAACTTCAATCGAAACTCAGCTTTGGTGAACAGTCGTTTCTTGATAAACTCCAACACATTCATTTA
TGGCCTCTTAACAGAGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKYSYVARQPILDADKKTIGYELLFRDGPKNTFPEVEPELATSRLLSDHFLSTHYNTLGDKLGFVNFPYASLVNLVPTLF
PKESLVVEVLEDCEPTDELLEAIITIYDAGYTIALDDFVPSKAWKRFLPYVSIIKFDIRLISIAKAAMFMNTLKDLNIEF
LAEKVETHEEYQEAIQAGFNYFQGYFFSKPEMIQTRALNPAFLTIVQLLKEIANDPINFAEVERLITLDMTMSYKLLSYV
NSAGGSSTPIRSFHQALVYLGEQKLRKLVSLVAIASAKEDKPDSLYGLAVIRARQCELLVEKMNVKVEPGQAFLTGMFSL
LDSLFDLPLVKVLDSVPIDDEIKQALIERKGILGAILAMVIAYEQARWDEATRIRKLLKLNEAELGQAYDEATSWAQDLL
SPTLK

Sequences:

>Translated_405_residues
MKYSYVARQPILDADKKTIGYELLFRDGPKNTFPEVEPELATSRLLSDHFLSTHYNTLGDKLGFVNFPYASLVNLVPTLF
PKESLVVEVLEDCEPTDELLEAIITIYDAGYTIALDDFVPSKAWKRFLPYVSIIKFDIRLISIAKAAMFMNTLKDLNIEF
LAEKVETHEEYQEAIQAGFNYFQGYFFSKPEMIQTRALNPAFLTIVQLLKEIANDPINFAEVERLITLDMTMSYKLLSYV
NSAGGSSTPIRSFHQALVYLGEQKLRKLVSLVAIASAKEDKPDSLYGLAVIRARQCELLVEKMNVKVEPGQAFLTGMFSL
LDSLFDLPLVKVLDSVPIDDEIKQALIERKGILGAILAMVIAYEQARWDEATRIRKLLKLNEAELGQAYDEATSWAQDLL
SPTLK
>Mature_405_residues
MKYSYVARQPILDADKKTIGYELLFRDGPKNTFPEVEPELATSRLLSDHFLSTHYNTLGDKLGFVNFPYASLVNLVPTLF
PKESLVVEVLEDCEPTDELLEAIITIYDAGYTIALDDFVPSKAWKRFLPYVSIIKFDIRLISIAKAAMFMNTLKDLNIEF
LAEKVETHEEYQEAIQAGFNYFQGYFFSKPEMIQTRALNPAFLTIVQLLKEIANDPINFAEVERLITLDMTMSYKLLSYV
NSAGGSSTPIRSFHQALVYLGEQKLRKLVSLVAIASAKEDKPDSLYGLAVIRARQCELLVEKMNVKVEPGQAFLTGMFSL
LDSLFDLPLVKVLDSVPIDDEIKQALIERKGILGAILAMVIAYEQARWDEATRIRKLLKLNEAELGQAYDEATSWAQDLL
SPTLK

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 45765; Mature: 45765

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSYVARQPILDADKKTIGYELLFRDGPKNTFPEVEPELATSRLLSDHFLSTHYNTLGD
CCCCHHHCCCCCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLGFVNFPYASLVNLVPTLFPKESLVVEVLEDCEPTDELLEAIITIYDAGYTIALDDFVP
HCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCC
SKAWKRFLPYVSIIKFDIRLISIAKAAMFMNTLKDLNIEFLAEKVETHEEYQEAIQAGFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
YFQGYFFSKPEMIQTRALNPAFLTIVQLLKEIANDPINFAEVERLITLDMTMSYKLLSYV
HHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NSAGGSSTPIRSFHQALVYLGEQKLRKLVSLVAIASAKEDKPDSLYGLAVIRARQCELLV
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EKMNVKVEPGQAFLTGMFSLLDSLFDLPLVKVLDSVPIDDEIKQALIERKGILGAILAMV
HHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHH
IAYEQARWDEATRIRKLLKLNEAELGQAYDEATSWAQDLLSPTLK
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKYSYVARQPILDADKKTIGYELLFRDGPKNTFPEVEPELATSRLLSDHFLSTHYNTLGD
CCCCHHHCCCCCCCCCHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLGFVNFPYASLVNLVPTLFPKESLVVEVLEDCEPTDELLEAIITIYDAGYTIALDDFVP
HCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCC
SKAWKRFLPYVSIIKFDIRLISIAKAAMFMNTLKDLNIEFLAEKVETHEEYQEAIQAGFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
YFQGYFFSKPEMIQTRALNPAFLTIVQLLKEIANDPINFAEVERLITLDMTMSYKLLSYV
HHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NSAGGSSTPIRSFHQALVYLGEQKLRKLVSLVAIASAKEDKPDSLYGLAVIRARQCELLV
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EKMNVKVEPGQAFLTGMFSLLDSLFDLPLVKVLDSVPIDDEIKQALIERKGILGAILAMV
HHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHH
IAYEQARWDEATRIRKLLKLNEAELGQAYDEATSWAQDLLSPTLK
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]