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The map label for this gene is pspB [H]

Identifier: 218709971

GI number: 218709971

Start: 2137810

End: 2138049

Strand: Reverse

Name: pspB [H]

Synonym: VS_1990

Alternate gene names: 218709971

Gene position: 2138049-2137810 (Counterclockwise)

Preceding gene: 218709972

Following gene: 218709970

Centisome position: 64.8

GC content: 43.33

Gene sequence:

>240_bases
TTGTCTATGTCAACATTTCTAATTGCAGGTCCACTGATTGTCTTTTTGATCTTCGTGGCACCGCTATGGTTATTCTTACA
CTACCGCAGCAAGAAGAAATCCAGCAATGGTCTTTCAGAAACGGATCTTCAGCGTCTGCATAAGCTTTCTGAGCAAGCTG
AGTCGATGCAAGACCGAGTGAAAACGTTAGAAAAAATACTGGATGCGGAGTCACCTAACTGGAGACGAAACTATGAGTAG

Upstream 100 bases:

>100_bases
AGACCAAGAGTTTGCAGAGCTACAAGCTCAAGACGAGATTGAAAAAGAGCTGGCGAAACTGAAGCAACAAGTTGAAAACC
GCGATAAATAATTTTAGGAG

Downstream 100 bases:

>100_bases
AGAACTGTATCGCGATCCGATTAACGGTAAATTGTCTGGCGTGTGTGCCGGATTAGCGAACTATTTTGGCCTTGAAGTTT
GGTTGGTTCGTATCTTAGTG

Product: phage shock protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MSMSTFLIAGPLIVFLIFVAPLWLFLHYRSKKKSSNGLSETDLQRLHKLSEQAESMQDRVKTLEKILDAESPNWRRNYE

Sequences:

>Translated_79_residues
MSMSTFLIAGPLIVFLIFVAPLWLFLHYRSKKKSSNGLSETDLQRLHKLSEQAESMQDRVKTLEKILDAESPNWRRNYE
>Mature_78_residues
SMSTFLIAGPLIVFLIFVAPLWLFLHYRSKKKSSNGLSETDLQRLHKLSEQAESMQDRVKTLEKILDAESPNWRRNYE

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspB is involved in transcription regulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspB family [H]

Homologues:

Organism=Escherichia coli, GI1787563, Length=73, Percent_Identity=47.945205479452, Blast_Score=79, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009554 [H]

Pfam domain/function: PF06667 PspB [H]

EC number: NA

Molecular weight: Translated: 9255; Mature: 9124

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSTFLIAGPLIVFLIFVAPLWLFLHYRSKKKSSNGLSETDLQRLHKLSEQAESMQDRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KTLEKILDAESPNWRRNYE
HHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SMSTFLIAGPLIVFLIFVAPLWLFLHYRSKKKSSNGLSETDLQRLHKLSEQAESMQDRV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KTLEKILDAESPNWRRNYE
HHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]