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The map label for this gene is ybjL [C]

Identifier: 218709825

GI number: 218709825

Start: 1978659

End: 1980341

Strand: Direct

Name: ybjL [C]

Synonym: VS_1837

Alternate gene names: 218709825

Gene position: 1978659-1980341 (Clockwise)

Preceding gene: 218709824

Following gene: 218709830

Centisome position: 59.97

GC content: 45.75

Gene sequence:

>1683_bases
GTGAATATCGACGTTGTCTTGCTGTTAAAACAAAACCCCATCCTTCTCATTTTTGTTGTGTTATCTATTGGCCTCGCCAT
TGGTAAAATTCGTTTCGGTAGTCTCCAACTAGGAAATTCAATCGGTGTTCTGATTACTTCTCTTATCATGGGACATCTTG
GCTTTTCCTTTAACGCCGACGCTCTCACAATTGGTTTCATGCTCTTCATTTACTGTGTAGGTATTGAAGCCGGGCCCAAC
TTCTTCGGTATATTCTTCAGAGATGGTAAGCATTACCTCATTCTTAGCCTCGTTGTACTTTCTACGGCCATTGCCCTTAC
TTATTTTTGCAGCGAATATTTAGGTCTTGGTTTCGGACTTTCCGCAGGCATGATGGCGGGAGCACTAACTGCAACACCAA
TATTAGTTGGCGCGCAAGATGCACTCAATTCAGGTTTAGCTGAAGTACCAAGAAACATGGACTTGGGTCTGGTTATAGAA
AACCTCTCTGTAGGTTACGCGATGGCTTATTTAGTCGGCTTAATCAGTATGATTATGTTTGCCCGCCTTATTCCAAAGCT
TCAGAAAGTAAACCTACACGACTCTGCAGAACAAATAGCTCAAGAGCGCGGCCTAGGCACCTCTGGCCAGCGTAAGGTTT
ACTTACCCATTATCCGTGCTTATCGTGTGGGACCAGAGCTCATTACCTGGACTGATGGCAAGAACCTTCGTGAGCTTGGC
ATCTATCGTCAAACTGGTTGCTACATCGAGCGGATTCGACGTAATGGTATTCTTGCCCACCCTGATGGCGATGCCATTCT
GCAAGAAGGCGATGAAATCGCATTGGTTGGTTTCCCTGACAGCCACGCTCGTCTTGATCCAAGTTTCCGAAACGGCAAAG
AAGTTTTTGACCGTAACCTTCTCGATCTACGAATCGTTGAAGAAGAGATTGTCGTTAAAAGTGACAACATCGCAGGTAAG
CGTTTATCTGACTTAAACTTATCCGAATACGGCTGTTTCCTTAACCGCGTAGTAAGAGCTCAAATTGAAATGCCGATGGA
TTTAAACATCGTACTTTCTAAAGGTGATGTACTACAAGTCAGTGGTGAAAAGAGCCGTGTTCACGGCCTTGCAGAAAAAA
TTGGTTTCATCTCGATTCACAGCCAAATGGCCGATTTGACGGCTTTCTGTAGCTTCTTCATTCTGGGCATTTTGTTTGGT
TTGATCACCATGACATTCGGCCAAGTCTCATTTGGTTTAGGTAATGCAGTTGGTCTTCTTCTATCGGGCATCATGCTTGG
CTTCTTACGAGCGAACCACCCTACCTTCGGTTACGTTCCTCAAGGCGCGTTGAATATGGTCAAAGATCTCGGTTTGATGT
TCTTTATGGTCGGTATCGGCTTGAGCGCCGGTGGTAAGATATTTGAGCATTTGACCCAAGTGGGTCCGCAAGTTATCGGG
ATAGCACTTATCGTGAGTGTACTGCCGGTATTCTTCGCTTACCTAGTCGGCGCTTACGCACTGAAGATGAACCGAGCTCT
TCTTTTTGGAGCCATCATTGGCGCACGAACCTGTGCTCCGGCAATGGACATAGTAAACGACCACGCTCGTTCAACTATCC
CAGCACTGGGGTACGCAGGTACGTACGCGATAGCCAATATATTGATGACCTTAGCGGGTACCTTTATCATTATCATCAGC
TAG

Upstream 100 bases:

>100_bases
CGAATAAAATTGAAAATAGCACTTATAATTTATTTATATTTAGATACAATTCACTCCTCAAACTGATCCTGTGTTTCACG
CTAATTATTGAGCAATCACT

Downstream 100 bases:

>100_bases
TTTATTCAGCGTTATAGCGCTTTAGATTAGATATTTTAAATGCACTAATTCATCTTTGAGTTAGTGCATTTTTTATTACT
TAATCTCTTTTCTCATCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MNIDVVLLLKQNPILLIFVVLSIGLAIGKIRFGSLQLGNSIGVLITSLIMGHLGFSFNADALTIGFMLFIYCVGIEAGPN
FFGIFFRDGKHYLILSLVVLSTAIALTYFCSEYLGLGFGLSAGMMAGALTATPILVGAQDALNSGLAEVPRNMDLGLVIE
NLSVGYAMAYLVGLISMIMFARLIPKLQKVNLHDSAEQIAQERGLGTSGQRKVYLPIIRAYRVGPELITWTDGKNLRELG
IYRQTGCYIERIRRNGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNLLDLRIVEEEIVVKSDNIAGK
RLSDLNLSEYGCFLNRVVRAQIEMPMDLNIVLSKGDVLQVSGEKSRVHGLAEKIGFISIHSQMADLTAFCSFFILGILFG
LITMTFGQVSFGLGNAVGLLLSGIMLGFLRANHPTFGYVPQGALNMVKDLGLMFFMVGIGLSAGGKIFEHLTQVGPQVIG
IALIVSVLPVFFAYLVGAYALKMNRALLFGAIIGARTCAPAMDIVNDHARSTIPALGYAGTYAIANILMTLAGTFIIIIS

Sequences:

>Translated_560_residues
MNIDVVLLLKQNPILLIFVVLSIGLAIGKIRFGSLQLGNSIGVLITSLIMGHLGFSFNADALTIGFMLFIYCVGIEAGPN
FFGIFFRDGKHYLILSLVVLSTAIALTYFCSEYLGLGFGLSAGMMAGALTATPILVGAQDALNSGLAEVPRNMDLGLVIE
NLSVGYAMAYLVGLISMIMFARLIPKLQKVNLHDSAEQIAQERGLGTSGQRKVYLPIIRAYRVGPELITWTDGKNLRELG
IYRQTGCYIERIRRNGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNLLDLRIVEEEIVVKSDNIAGK
RLSDLNLSEYGCFLNRVVRAQIEMPMDLNIVLSKGDVLQVSGEKSRVHGLAEKIGFISIHSQMADLTAFCSFFILGILFG
LITMTFGQVSFGLGNAVGLLLSGIMLGFLRANHPTFGYVPQGALNMVKDLGLMFFMVGIGLSAGGKIFEHLTQVGPQVIG
IALIVSVLPVFFAYLVGAYALKMNRALLFGAIIGARTCAPAMDIVNDHARSTIPALGYAGTYAIANILMTLAGTFIIIIS
>Mature_560_residues
MNIDVVLLLKQNPILLIFVVLSIGLAIGKIRFGSLQLGNSIGVLITSLIMGHLGFSFNADALTIGFMLFIYCVGIEAGPN
FFGIFFRDGKHYLILSLVVLSTAIALTYFCSEYLGLGFGLSAGMMAGALTATPILVGAQDALNSGLAEVPRNMDLGLVIE
NLSVGYAMAYLVGLISMIMFARLIPKLQKVNLHDSAEQIAQERGLGTSGQRKVYLPIIRAYRVGPELITWTDGKNLRELG
IYRQTGCYIERIRRNGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNLLDLRIVEEEIVVKSDNIAGK
RLSDLNLSEYGCFLNRVVRAQIEMPMDLNIVLSKGDVLQVSGEKSRVHGLAEKIGFISIHSQMADLTAFCSFFILGILFG
LITMTFGQVSFGLGNAVGLLLSGIMLGFLRANHPTFGYVPQGALNMVKDLGLMFFMVGIGLSAGGKIFEHLTQVGPQVIG
IALIVSVLPVFFAYLVGAYALKMNRALLFGAIIGARTCAPAMDIVNDHARSTIPALGYAGTYAIANILMTLAGTFIIIIS

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1787071, Length=560, Percent_Identity=65.7142857142857, Blast_Score=767, Evalue=0.0,
Organism=Escherichia coli, GI87082315, Length=547, Percent_Identity=26.8738574040219, Blast_Score=142, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR023017
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 60481; Mature: 60481

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDVVLLLKQNPILLIFVVLSIGLAIGKIRFGSLQLGNSIGVLITSLIMGHLGFSFNAD
CCCEEEEEECCCCHHHHHHHHHHHHHHHCEEECCEEECCHHHHHHHHHHHHHCCCCCCCH
ALTIGFMLFIYCVGIEAGPNFFGIFFRDGKHYLILSLVVLSTAIALTYFCSEYLGLGFGL
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SAGMMAGALTATPILVGAQDALNSGLAEVPRNMDLGLVIENLSVGYAMAYLVGLISMIMF
HHHHHHHHHHHCCEEEECHHHHCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
ARLIPKLQKVNLHDSAEQIAQERGLGTSGQRKVYLPIIRAYRVGPELITWTDGKNLRELG
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCEEEECCCCCHHHHC
IYRQTGCYIERIRRNGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNL
CHHHCCHHHHHHHHCCEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCC
LDLRIVEEEIVVKSDNIAGKRLSDLNLSEYGCFLNRVVRAQIEMPMDLNIVLSKGDVLQV
CEEEEEHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE
SGEKSRVHGLAEKIGFISIHSQMADLTAFCSFFILGILFGLITMTFGQVSFGLGNAVGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LSGIMLGFLRANHPTFGYVPQGALNMVKDLGLMFFMVGIGLSAGGKIFEHLTQVGPQVIG
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHH
IALIVSVLPVFFAYLVGAYALKMNRALLFGAIIGARTCAPAMDIVNDHARSTIPALGYAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
TYAIANILMTLAGTFIIIIS
HHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MNIDVVLLLKQNPILLIFVVLSIGLAIGKIRFGSLQLGNSIGVLITSLIMGHLGFSFNAD
CCCEEEEEECCCCHHHHHHHHHHHHHHHCEEECCEEECCHHHHHHHHHHHHHCCCCCCCH
ALTIGFMLFIYCVGIEAGPNFFGIFFRDGKHYLILSLVVLSTAIALTYFCSEYLGLGFGL
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SAGMMAGALTATPILVGAQDALNSGLAEVPRNMDLGLVIENLSVGYAMAYLVGLISMIMF
HHHHHHHHHHHCCEEEECHHHHCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
ARLIPKLQKVNLHDSAEQIAQERGLGTSGQRKVYLPIIRAYRVGPELITWTDGKNLRELG
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCEEEECCCCCHHHHC
IYRQTGCYIERIRRNGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNL
CHHHCCHHHHHHHHCCEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHCCC
LDLRIVEEEIVVKSDNIAGKRLSDLNLSEYGCFLNRVVRAQIEMPMDLNIVLSKGDVLQV
CEEEEEHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE
SGEKSRVHGLAEKIGFISIHSQMADLTAFCSFFILGILFGLITMTFGQVSFGLGNAVGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LSGIMLGFLRANHPTFGYVPQGALNMVKDLGLMFFMVGIGLSAGGKIFEHLTQVGPQVIG
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHH
IALIVSVLPVFFAYLVGAYALKMNRALLFGAIIGARTCAPAMDIVNDHARSTIPALGYAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
TYAIANILMTLAGTFIIIIS
HHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]