| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is pabB [H]
Identifier: 218709786
GI number: 218709786
Start: 1926199
End: 1927605
Strand: Direct
Name: pabB [H]
Synonym: VS_1798
Alternate gene names: 218709786
Gene position: 1926199-1927605 (Clockwise)
Preceding gene: 218709777
Following gene: 218709790
Centisome position: 58.38
GC content: 45.77
Gene sequence:
>1407_bases ATGAATAACAACGAATTTCGCTCTATCCAAATCAAGCCGCTTGAATATCAATCAACTTTAGCTAAACAGCTGTTTTCTCA TATTGAAAGCGTGCCGTGGGCAATGCTATTACGCTCTGCCTCAGAAAGCCACGTCGATAGTCGATACGACATTTTAGTTG CTCAACCCATCGCCACCTTCGAGACAATCGGTGCAAAAACGACCGTCAATGTTAATGAGACGTGCGAGGTTTCAGAGTCA GACCCTTTCGAACTACTCGACCAATATCAGCAGCAATTACTACCCGCAATCAGTGAGCACCCTGAACTGCCTTTCGTTGG TGGTGCTTTAGGGTATTTTAGTTACGATTTAGGGCGACGAGTAGAAGCTCTTCCCTCTCTTGCTAAGCGTGATATTTCTG CACCAGACATGGCGGTTGGATTGTATGAATGGGCTGTGATTGTTGATCATAAGCTTAAAGCTGCGTTCCTTGTTGGGCAA AACATTGATACCCATTGGGATTGGTTAACTCAACAACAATCGCCAAGCCAACAAGCAGAAAGAGCGGAACAAACAGAACG AGCTCGTCAGAAGTTTGGATTAACCACTCCATGGCAATCCAATATGACAGAACAAAGTTATGCCAATAAATTCGATAGCG TTCAAGAGTACTTGTTGTCGGGTGACTGTTATCAGATAAACCTTGCTCAGCGCTTCAATGCCCAATACCAAGGCAGTGAA TGGCTCGCTTATGAAAAGTTAGAGAAATACAACTCAGCTCCATTCTCTGGTTTTATCCGTTTAGCAGGCTGCACCATTCT CAGTGTCTCACCTGAGCGTTTTTTAGAGCTCAATAGTGGCACCATTGAAACCAAGCCAATCAAAGGGACACGTCCTCGTT CTGAAAATTCCATGATTGATGACGCCAATGCTCAAGACCTGTTAACTGCTGAGAAAGATCAGGCGGAAAACCTGATGATT GTCGACCTGCTTCGTAATGATATTGGCCGAGTCGCAAAGCCGGGATCGGTTCATGTACCAAAGCTCTTCGATATAGAGAG TTTCCCTGCTGTGCACCACTTAGTGAGCACGATAAGGGCAGAGCTTGATGTCCATCATTCAGCACATGACCTATTAAGGG CTTGCTTTCCCGGGGGGTCGATTACCGGCGCTCCAAAAGTTCGCGCGATGCAGATCATTGAGGAGCTAGAGCCTCATCGT CGCTCGGCGTATTGCGGTAGCATTGGTTATATCAGCCGTAATGGCAGAATGGACACCAGCATTACGATTCGTACGTTAGT GGCAGAAAACAATACGCTTTATGCTTGGGCTGGAGGAGGTGTAGTATTTGATAGTGATTGTGCTTCTGAGTACCAAGAGA CTCTTGATAAGCTGAGTAGAATATTGCCTGTACTGGCTGATAGATAA
Upstream 100 bases:
>100_bases ACCGTTCTAATCAAGAACCCATTTTATTTTCAATTTATGATACTCTTGCTTCCTCTCACACGCCATGCAGTGATCGAACT CTTTGTCACAAATTAAACAA
Downstream 100 bases:
>100_bases ATTTAATCTAGATTTATTAAAACGGGTTATTAAAAACAGCTAAAAAACCAATCTGGAAAGTACTTTAATATTAAAAAAGC TAAGTGGGCAATCACCTACT
Product: para-aminobenzoate synthase component I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MNNNEFRSIQIKPLEYQSTLAKQLFSHIESVPWAMLLRSASESHVDSRYDILVAQPIATFETIGAKTTVNVNETCEVSES DPFELLDQYQQQLLPAISEHPELPFVGGALGYFSYDLGRRVEALPSLAKRDISAPDMAVGLYEWAVIVDHKLKAAFLVGQ NIDTHWDWLTQQQSPSQQAERAEQTERARQKFGLTTPWQSNMTEQSYANKFDSVQEYLLSGDCYQINLAQRFNAQYQGSE WLAYEKLEKYNSAPFSGFIRLAGCTILSVSPERFLELNSGTIETKPIKGTRPRSENSMIDDANAQDLLTAEKDQAENLMI VDLLRNDIGRVAKPGSVHVPKLFDIESFPAVHHLVSTIRAELDVHHSAHDLLRACFPGGSITGAPKVRAMQIIEELEPHR RSAYCGSIGYISRNGRMDTSITIRTLVAENNTLYAWAGGGVVFDSDCASEYQETLDKLSRILPVLADR
Sequences:
>Translated_468_residues MNNNEFRSIQIKPLEYQSTLAKQLFSHIESVPWAMLLRSASESHVDSRYDILVAQPIATFETIGAKTTVNVNETCEVSES DPFELLDQYQQQLLPAISEHPELPFVGGALGYFSYDLGRRVEALPSLAKRDISAPDMAVGLYEWAVIVDHKLKAAFLVGQ NIDTHWDWLTQQQSPSQQAERAEQTERARQKFGLTTPWQSNMTEQSYANKFDSVQEYLLSGDCYQINLAQRFNAQYQGSE WLAYEKLEKYNSAPFSGFIRLAGCTILSVSPERFLELNSGTIETKPIKGTRPRSENSMIDDANAQDLLTAEKDQAENLMI VDLLRNDIGRVAKPGSVHVPKLFDIESFPAVHHLVSTIRAELDVHHSAHDLLRACFPGGSITGAPKVRAMQIIEELEPHR RSAYCGSIGYISRNGRMDTSITIRTLVAENNTLYAWAGGGVVFDSDCASEYQETLDKLSRILPVLADR >Mature_468_residues MNNNEFRSIQIKPLEYQSTLAKQLFSHIESVPWAMLLRSASESHVDSRYDILVAQPIATFETIGAKTTVNVNETCEVSES DPFELLDQYQQQLLPAISEHPELPFVGGALGYFSYDLGRRVEALPSLAKRDISAPDMAVGLYEWAVIVDHKLKAAFLVGQ NIDTHWDWLTQQQSPSQQAERAEQTERARQKFGLTTPWQSNMTEQSYANKFDSVQEYLLSGDCYQINLAQRFNAQYQGSE WLAYEKLEKYNSAPFSGFIRLAGCTILSVSPERFLELNSGTIETKPIKGTRPRSENSMIDDANAQDLLTAEKDQAENLMI VDLLRNDIGRVAKPGSVHVPKLFDIESFPAVHHLVSTIRAELDVHHSAHDLLRACFPGGSITGAPKVRAMQIIEELEPHR RSAYCGSIGYISRNGRMDTSITIRTLVAENNTLYAWAGGGVVFDSDCASEYQETLDKLSRILPVLADR
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=453, Percent_Identity=53.6423841059603, Blast_Score=473, Evalue=1e-134, Organism=Escherichia coli, GI1787518, Length=403, Percent_Identity=33.4987593052109, Blast_Score=192, Evalue=4e-50, Organism=Escherichia coli, GI1786809, Length=223, Percent_Identity=26.9058295964126, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI87082077, Length=206, Percent_Identity=27.1844660194175, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=439, Percent_Identity=31.6628701594533, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6324361, Length=420, Percent_Identity=26.9047619047619, Blast_Score=142, Evalue=9e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 52466; Mature: 52466
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNEFRSIQIKPLEYQSTLAKQLFSHIESVPWAMLLRSASESHVDSRYDILVAQPIATF CCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHCCCCCEEEEEECCHHHH ETIGAKTTVNVNETCEVSESDPFELLDQYQQQLLPAISEHPELPFVGGALGYFSYDLGRR HHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHH VEALPSLAKRDISAPDMAVGLYEWAVIVDHKLKAAFLVGQNIDTHWDWLTQQQSPSQQAE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCHHHHH RAEQTERARQKFGLTTPWQSNMTEQSYANKFDSVQEYLLSGDCYQINLAQRFNAQYQGSE HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCC WLAYEKLEKYNSAPFSGFIRLAGCTILSVSPERFLELNSGTIETKPIKGTRPRSENSMID HHHHHHHHHHCCCCHHHHHHHHCEEEEEECHHHHEEECCCEEEECCCCCCCCCCCCCCCC DANAQDLLTAEKDQAENLMIVDLLRNDIGRVAKPGSVHVPKLFDIESFPAVHHLVSTIRA CCCCHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHH ELDVHHSAHDLLRACFPGGSITGAPKVRAMQIIEELEPHRRSAYCGSIGYISRNGRMDTS HHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCEEECCCCCCCE ITIRTLVAENNTLYAWAGGGVVFDSDCASEYQETLDKLSRILPVLADR EEEEEEEECCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNNEFRSIQIKPLEYQSTLAKQLFSHIESVPWAMLLRSASESHVDSRYDILVAQPIATF CCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHCCCCCEEEEEECCHHHH ETIGAKTTVNVNETCEVSESDPFELLDQYQQQLLPAISEHPELPFVGGALGYFSYDLGRR HHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHH VEALPSLAKRDISAPDMAVGLYEWAVIVDHKLKAAFLVGQNIDTHWDWLTQQQSPSQQAE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCHHHHH RAEQTERARQKFGLTTPWQSNMTEQSYANKFDSVQEYLLSGDCYQINLAQRFNAQYQGSE HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCC WLAYEKLEKYNSAPFSGFIRLAGCTILSVSPERFLELNSGTIETKPIKGTRPRSENSMID HHHHHHHHHHCCCCHHHHHHHHCEEEEEECHHHHEEECCCEEEECCCCCCCCCCCCCCCC DANAQDLLTAEKDQAENLMIVDLLRNDIGRVAKPGSVHVPKLFDIESFPAVHHLVSTIRA CCCCHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHH ELDVHHSAHDLLRACFPGGSITGAPKVRAMQIIEELEPHRRSAYCGSIGYISRNGRMDTS HHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCEEECCCCCCCE ITIRTLVAENNTLYAWAGGGVVFDSDCASEYQETLDKLSRILPVLADR EEEEEEEECCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]