| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709777
Identifier: 218709777
GI number: 218709777
Start: 1917337
End: 1917780
Strand: Direct
Name: 218709777
Synonym: VS_1789
Alternate gene names: NA
Gene position: 1917337-1917780 (Clockwise)
Preceding gene: 218709776
Following gene: 218709786
Centisome position: 58.11
GC content: 47.97
Gene sequence:
>444_bases TTGAGCAACTTGAAGTGGAAGACAAAGTGCTGCTGGCTGCTGGCAAGCTGGTTCTTGAGCAAAGCGATTAACCATAACCA ATTTGAACAAGCTCACTGGTGGGCTCTGGGTCGCTTAGCGTCTCGCACACCGTTATACGGAAGCCAACACAGTGTCATTC CAAGAGAGCAAGCAGAACAGTGGTTACCAAAGCTGCTTGACCAGAATTGGCAGAAAGAGCAGATGATTGCCTTCGCGGCT GTGATGATTTGTCGTAAGACGGGTGACCGACAGTTCGATATCTCTGATGACTACCGTGCTCAGGTTCTTGAAAAATTAAA GCAAAGCAAGGTGCCAGAGTCTTGGCTAACGCTAGTAAGTGAAGTTACTGAGCTTTCTGAGAGCGAGTCTAAGCGCGTGT TTGGTGATGCATTACCAAGCGGCTTGAGCCTAATCAATAACTAG
Upstream 100 bases:
>100_bases ATCGCGAAATACCTTCACCCAGGTGCAATGAAGAACCCTAAAACGGCTAAAGATGCACAAGACAATGGCTATGAAGCCAT GGTTCGTTTAGCGGCATCAC
Downstream 100 bases:
>100_bases CTTTAAAAACGATTAGCTTTAGCTGTTAATGAGTAAAGAAGCTAACGAAAAAAGAAAAAGCCACTTTCGGTTCGTTGAAA GTGGCTTTTTTATTGGTGGC
Product: DnaK-like protein
Products: NA
Alternate protein names: Molecular Chaperone; Chaperone Heat-Shock Protein; Chaperone Protein HscA/DNAK; Molecular Chaperone-Like Protein; Hsp70 Heat Shock Protein; Heat Shock Family Protein; Chaperone DNAK-Related Protein; DNAK-Like Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSNLKWKTKCCWLLASWFLSKAINHNQFEQAHWWALGRLASRTPLYGSQHSVIPREQAEQWLPKLLDQNWQKEQMIAFAA VMICRKTGDRQFDISDDYRAQVLEKLKQSKVPESWLTLVSEVTELSESESKRVFGDALPSGLSLINN
Sequences:
>Translated_147_residues MSNLKWKTKCCWLLASWFLSKAINHNQFEQAHWWALGRLASRTPLYGSQHSVIPREQAEQWLPKLLDQNWQKEQMIAFAA VMICRKTGDRQFDISDDYRAQVLEKLKQSKVPESWLTLVSEVTELSESESKRVFGDALPSGLSLINN >Mature_146_residues SNLKWKTKCCWLLASWFLSKAINHNQFEQAHWWALGRLASRTPLYGSQHSVIPREQAEQWLPKLLDQNWQKEQMIAFAAV MICRKTGDRQFDISDDYRAQVLEKLKQSKVPESWLTLVSEVTELSESESKRVFGDALPSGLSLINN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17038; Mature: 16906
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLKWKTKCCWLLASWFLSKAINHNQFEQAHWWALGRLASRTPLYGSQHSVIPREQAEQ CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH WLPKLLDQNWQKEQMIAFAAVMICRKTGDRQFDISDDYRAQVLEKLKQSKVPESWLTLVS HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH EVTELSESESKRVFGDALPSGLSLINN HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNLKWKTKCCWLLASWFLSKAINHNQFEQAHWWALGRLASRTPLYGSQHSVIPREQAEQ CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH WLPKLLDQNWQKEQMIAFAAVMICRKTGDRQFDISDDYRAQVLEKLKQSKVPESWLTLVS HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH EVTELSESESKRVFGDALPSGLSLINN HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA