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The map label for this gene is nudL [H]

Identifier: 218709790

GI number: 218709790

Start: 1931088

End: 1931687

Strand: Direct

Name: nudL [H]

Synonym: VS_1802

Alternate gene names: 218709790

Gene position: 1931088-1931687 (Clockwise)

Preceding gene: 218709786

Following gene: 218709791

Centisome position: 58.53

GC content: 42.67

Gene sequence:

>600_bases
ATGAACAAAGATAACTTCCTTCAACAATTCCAGCTCAACTCTACCGTTGGCTATCACCCAGAATCCGTTGAGCGCGTTTC
ACATATCAATGACGATCAATTGCGTAAAGCAGCAGTGGTAGTCGGCTTAGTGGAACGAGAGGATGGTTTACATGTTATTT
TTACGAAAAGAGCCGCTCATTTAAAACATCACCCTGGTCAAATCAGCTTTCCTGGAGGGAAACACGAACTCTCCGATCCT
TCTATGCAATTCACCGCACTTAGAGAACTTCACGAAGAGGTCGGAATTCGATCGGATCAGGTTAAAATTGTTGGGCAATT
ACCTACTTTGAGTACCATTAGTAAATTTTTAGTTACACCGATTGTTGTAGTGGTCGATTCGGACTATAAACCCATCATCG
ATGAGAACGAAGTTGCTTCGATTTTTGAGGTGCCCGCCACCTATGTTTTAGACCAAGCCAAGTTACACAGCCACACTGTT
AACTTAAAAAAAATCAAGCATCGTGTTTTTGCCATGCCCTTCCAAGAGCACCTAATTTGGGGCGTTACAGCTCAAATCAT
CCAATCACTGCAGCAACACGTAGTGCAACAAATTACATAG

Upstream 100 bases:

>100_bases
CCGGTACTAACGGAGGAAAGTGAAGGCAAATTCGAAATTGGTAATCAACACACGGTTATGACTATACTTAAAATCATAAT
AATCAATATATTGGCTTTAT

Downstream 100 bases:

>100_bases
AAACTACGTTTTGTTTAATCCTTGTTAACAAACACAGCCTTTTCCATGGAACAGATTTATTAATCCAATTTTACGCAAAC
GTTTCCCTGGTATAATTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MNKDNFLQQFQLNSTVGYHPESVERVSHINDDQLRKAAVVVGLVEREDGLHVIFTKRAAHLKHHPGQISFPGGKHELSDP
SMQFTALRELHEEVGIRSDQVKIVGQLPTLSTISKFLVTPIVVVVDSDYKPIIDENEVASIFEVPATYVLDQAKLHSHTV
NLKKIKHRVFAMPFQEHLIWGVTAQIIQSLQQHVVQQIT

Sequences:

>Translated_199_residues
MNKDNFLQQFQLNSTVGYHPESVERVSHINDDQLRKAAVVVGLVEREDGLHVIFTKRAAHLKHHPGQISFPGGKHELSDP
SMQFTALRELHEEVGIRSDQVKIVGQLPTLSTISKFLVTPIVVVVDSDYKPIIDENEVASIFEVPATYVLDQAKLHSHTV
NLKKIKHRVFAMPFQEHLIWGVTAQIIQSLQQHVVQQIT
>Mature_199_residues
MNKDNFLQQFQLNSTVGYHPESVERVSHINDDQLRKAAVVVGLVEREDGLHVIFTKRAAHLKHHPGQISFPGGKHELSDP
SMQFTALRELHEEVGIRSDQVKIVGQLPTLSTISKFLVTPIVVVVDSDYKPIIDENEVASIFEVPATYVLDQAKLHSHTV
NLKKIKHRVFAMPFQEHLIWGVTAQIIQSLQQHVVQQIT

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=115, Percent_Identity=39.1304347826087, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1788115, Length=193, Percent_Identity=33.6787564766839, Blast_Score=99, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17536993, Length=122, Percent_Identity=31.9672131147541, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17510677, Length=144, Percent_Identity=31.25, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI18859683, Length=156, Percent_Identity=29.4871794871795, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22503; Mature: 22503

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDNFLQQFQLNSTVGYHPESVERVSHINDDQLRKAAVVVGLVEREDGLHVIFTKRAAH
CCCHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHEEEECCCCEEEEEECHHHH
LKHHPGQISFPGGKHELSDPSMQFTALRELHEEVGIRSDQVKIVGQLPTLSTISKFLVTP
HCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCE
IVVVVDSDYKPIIDENEVASIFEVPATYVLDQAKLHSHTVNLKKIKHRVFAMPFQEHLIW
EEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH
GVTAQIIQSLQQHVVQQIT
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKDNFLQQFQLNSTVGYHPESVERVSHINDDQLRKAAVVVGLVEREDGLHVIFTKRAAH
CCCHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHEEEECCCCEEEEEECHHHH
LKHHPGQISFPGGKHELSDPSMQFTALRELHEEVGIRSDQVKIVGQLPTLSTISKFLVTP
HCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCE
IVVVVDSDYKPIIDENEVASIFEVPATYVLDQAKLHSHTVNLKKIKHRVFAMPFQEHLIW
EEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHH
GVTAQIIQSLQQHVVQQIT
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA