| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is astE [H]
Identifier: 218709686
GI number: 218709686
Start: 1822303
End: 1823331
Strand: Reverse
Name: astE [H]
Synonym: VS_1697
Alternate gene names: 218709686
Gene position: 1823331-1822303 (Counterclockwise)
Preceding gene: 218709687
Following gene: 218709685
Centisome position: 55.26
GC content: 45.0
Gene sequence:
>1029_bases ATGACGAAGACCCTCTTTCGCCAATCATTTCTTTTTGACAGCCTAGATCTTGAGCAAGAAGTGGTTGCAGGACAGACCGT ACTGAGTAACGGTGTTCAAATTAAGCTTCATCAACGCGGTGTATTGGAAGTGATTCCCGCAGAGTATAATTCTGAGACCA AGAACATCATCTTTTCAACAGGTGTTCATGGCGACGAAACTTCACCAATGGAGCTGATTGATAAGCTCATTGAGGATATT GAAACCGGCTTCCAAGTCGTGACAGCAAGATGTTTGTTCATCATTGCTCACCCAGAAGCGACCAATGCGCATACGCGTTT TCTTGATGTGAATATGAACCGTCTGTTTGATGAAAAACAGTACGAGAGTAATCGAGAAGTGGACATCGCGAAGAACCTTA AGTTCTTGGTTACTGAGTTTTACAAGGAAACGGTGCCTGCCACTCGTTGGCACTTAGATCTGCACTGTGCGATCCGTTTG TCTAAGCATTACTCTTTCGCCGTAAGCCCTAAGGTTCGCCACGAAGTTCGCAGTAAAGCCTTGTTCGATTTCATTAACAG TGCTCACGTTGAAGCGGTGTTGTTATCCAATGCGCCAACGAGCACCTTCAGTTGGTACAGCGCTGAAAACTTTGAAGCCC AAGCACTGACAATGGAGCTAGGGCAGGTAGCAAGAATTGGTGAGAACCAGCTTGATAAGTTAACGGCTTTCGATTTGGCA ATGCGCAATTTGATTGCTGAAATAGAACCAGAGCATTTGCCAAAGAAAACCATTACTTATCGCGTAAGCCGAACCATTGT TCGTTTGCATGATGATTTTGATTTCATGTTCTCTGATGCCGTTGAAAACTTTACGGCGTTCAAGCACGGTGAAGTGTTTG GTCATGATGGTGATAAGCCATTGATGGCGAAGAATGAAAACGAAGCAGTAGTGTTCCCAAATCGCAACGTTGCTATCGGT CAACGAGCGGCCTTAATGGTGTGCGAAGTTGAAACACGATTCGACCACGGTCAGCTTGTGTACGATTAA
Upstream 100 bases:
>100_bases TGTGAGTGATAACGGAGTTTCTATTGATAAGTGCGATCCTAGCAACACAATTTCTATGTACAATTTATTAACATACGGCC GTGCAATTAAGGAGTAGCGC
Downstream 100 bases:
>100_bases TACCGACTCGGGTTTAAACGACGAAAACAACCGCTCAACTGGTTGAAATTTCAAGGTTCACATTACGGTGTGAGCCTTGA GTTTATTTGGGGATACAGGT
Product: succinylglutamate desuccinylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTKTLFRQSFLFDSLDLEQEVVAGQTVLSNGVQIKLHQRGVLEVIPAEYNSETKNIIFSTGVHGDETSPMELIDKLIEDI ETGFQVVTARCLFIIAHPEATNAHTRFLDVNMNRLFDEKQYESNREVDIAKNLKFLVTEFYKETVPATRWHLDLHCAIRL SKHYSFAVSPKVRHEVRSKALFDFINSAHVEAVLLSNAPTSTFSWYSAENFEAQALTMELGQVARIGENQLDKLTAFDLA MRNLIAEIEPEHLPKKTITYRVSRTIVRLHDDFDFMFSDAVENFTAFKHGEVFGHDGDKPLMAKNENEAVVFPNRNVAIG QRAALMVCEVETRFDHGQLVYD
Sequences:
>Translated_342_residues MTKTLFRQSFLFDSLDLEQEVVAGQTVLSNGVQIKLHQRGVLEVIPAEYNSETKNIIFSTGVHGDETSPMELIDKLIEDI ETGFQVVTARCLFIIAHPEATNAHTRFLDVNMNRLFDEKQYESNREVDIAKNLKFLVTEFYKETVPATRWHLDLHCAIRL SKHYSFAVSPKVRHEVRSKALFDFINSAHVEAVLLSNAPTSTFSWYSAENFEAQALTMELGQVARIGENQLDKLTAFDLA MRNLIAEIEPEHLPKKTITYRVSRTIVRLHDDFDFMFSDAVENFTAFKHGEVFGHDGDKPLMAKNENEAVVFPNRNVAIG QRAALMVCEVETRFDHGQLVYD >Mature_341_residues TKTLFRQSFLFDSLDLEQEVVAGQTVLSNGVQIKLHQRGVLEVIPAEYNSETKNIIFSTGVHGDETSPMELIDKLIEDIE TGFQVVTARCLFIIAHPEATNAHTRFLDVNMNRLFDEKQYESNREVDIAKNLKFLVTEFYKETVPATRWHLDLHCAIRLS KHYSFAVSPKVRHEVRSKALFDFINSAHVEAVLLSNAPTSTFSWYSAENFEAQALTMELGQVARIGENQLDKLTAFDLAM RNLIAEIEPEHLPKKTITYRVSRTIVRLHDDFDFMFSDAVENFTAFKHGEVFGHDGDKPLMAKNENEAVVFPNRNVAIGQ RAALMVCEVETRFDHGQLVYD
Specific function: Transforms N(2)-succinylglutamate into succinate and glutamate [H]
COG id: COG2988
COG function: function code E; Succinylglutamate desuccinylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788040, Length=321, Percent_Identity=30.8411214953271, Blast_Score=161, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007036 - InterPro: IPR016681 [H]
Pfam domain/function: PF04952 AstE_AspA [H]
EC number: =3.5.1.96 [H]
Molecular weight: Translated: 39016; Mature: 38884
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTLFRQSFLFDSLDLEQEVVAGQTVLSNGVQIKLHQRGVLEVIPAEYNSETKNIIFST CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCEEEEEC GVHGDETSPMELIDKLIEDIETGFQVVTARCLFIIAHPEATNAHTRFLDVNMNRLFDEKQ CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEEEECCHHHHHCHHH YESNREVDIAKNLKFLVTEFYKETVPATRWHLDLHCAIRLSKHYSFAVSPKVRHEVRSKA HCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEEEECHHHHHHHHHHH LFDFINSAHVEAVLLSNAPTSTFSWYSAENFEAQALTMELGQVARIGENQLDKLTAFDLA HHHHHHCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH MRNLIAEIEPEHLPKKTITYRVSRTIVRLHDDFDFMFSDAVENFTAFKHGEVFGHDGDKP HHHHHHHCCCCCCCCHHEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEECCCCCCC LMAKNENEAVVFPNRNVAIGQRAALMVCEVETRFDHGQLVYD CEECCCCCEEEECCCCEECCCCEEEEEEEEECCCCCCCEECC >Mature Secondary Structure TKTLFRQSFLFDSLDLEQEVVAGQTVLSNGVQIKLHQRGVLEVIPAEYNSETKNIIFST CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCEEEEEC GVHGDETSPMELIDKLIEDIETGFQVVTARCLFIIAHPEATNAHTRFLDVNMNRLFDEKQ CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEEEECCHHHHHCHHH YESNREVDIAKNLKFLVTEFYKETVPATRWHLDLHCAIRLSKHYSFAVSPKVRHEVRSKA HCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEEEECHHHHHHHHHHH LFDFINSAHVEAVLLSNAPTSTFSWYSAENFEAQALTMELGQVARIGENQLDKLTAFDLA HHHHHHCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH MRNLIAEIEPEHLPKKTITYRVSRTIVRLHDDFDFMFSDAVENFTAFKHGEVFGHDGDKP HHHHHHHCCCCCCCCHHEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEECCCCCCC LMAKNENEAVVFPNRNVAIGQRAALMVCEVETRFDHGQLVYD CEECCCCCEEEECCCCEECCCCEEEEEEEEECCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA