| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709622
Identifier: 218709622
GI number: 218709622
Start: 1750225
End: 1750968
Strand: Direct
Name: 218709622
Synonym: VS_1632
Alternate gene names: NA
Gene position: 1750225-1750968 (Clockwise)
Preceding gene: 218709621
Following gene: 218709629
Centisome position: 53.05
GC content: 42.47
Gene sequence:
>744_bases ATGTCCGCCAACGCACTCTATACCGACCTATCCGGTTACTATGATTTAATGTGTGTCGATATTGACTACCAAGCGCAGAG TGACTGCGTTCGTAGGTTACATCAGATTTTTGGAAATAAAGGAAAAACACACCTCGACCTTGGATGTGGCACTGGACCAC ACGTTCGCCATTTTATTGATTACGGCTATCAAAGTAATGGCCTTGATCTGAATAAACCAATGCTCGACATTGCGCAAGTT CGTTGCCCTGAAGCTAACTTTTCAGTACAAAACATGAGTAACTTTGAGGTCTCAGAACCGCTCGATCTTATCACTTGTTT CTTGTATTCCATCCATTACAACGACGGTATTGAGAGACTAAAAGAGTGCATTGCAAGCGTGCACCGAGCTTTGAAACCCG AAGGTGTCTTCTGCTTCAACGTGGTTGATAAAGAGAAGATCAGCAATGACTTGTTTGTTCGACATACCGCCAACAAAGAA CATGATGACTTTACCTTTCGCTCAGGTTGGTACTACTCTGGCGAAGGTAGTAAGCAAATGTTAAAGCTAAGTATCGAAAA AACGACTGCGGGTGAAACTCAAGTATGGAATGACGAACACCCTATGGTGGCATTCTCGTTTAAGGAATTGATCGAGATAT TGAAGCCTTACTTTGAGGTTCATATTTTTGAGCACGATTATGACAAGCTGCTGCCTTGGGATACCAAATCAGGTAATGCT TTGGTCACTTGTGTAAAAATCTAG
Upstream 100 bases:
>100_bases TCATTTAAGCTTATAAGTTGACCCAAGATTTTCTTGTTATTTTTAAGTTCTAGTTTACTATGCGCCACCCCAATTTTTTC AGCAAATGCTGCAGGCAAAC
Downstream 100 bases:
>100_bases GTAAGCCAATTCCAAACGAATTAAACCGATACAAGCACACAAAAAACAACCCACACTCGCCGTTCTCTTTATAGAGTATC GAGCCAATGTGGGTTCTTCG
Product: putative methyltransferase
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; S-Adenosylmethionine-Dependent Methyltransferase; Methyltransferase Domain Family
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSANALYTDLSGYYDLMCVDIDYQAQSDCVRRLHQIFGNKGKTHLDLGCGTGPHVRHFIDYGYQSNGLDLNKPMLDIAQV RCPEANFSVQNMSNFEVSEPLDLITCFLYSIHYNDGIERLKECIASVHRALKPEGVFCFNVVDKEKISNDLFVRHTANKE HDDFTFRSGWYYSGEGSKQMLKLSIEKTTAGETQVWNDEHPMVAFSFKELIEILKPYFEVHIFEHDYDKLLPWDTKSGNA LVTCVKI
Sequences:
>Translated_247_residues MSANALYTDLSGYYDLMCVDIDYQAQSDCVRRLHQIFGNKGKTHLDLGCGTGPHVRHFIDYGYQSNGLDLNKPMLDIAQV RCPEANFSVQNMSNFEVSEPLDLITCFLYSIHYNDGIERLKECIASVHRALKPEGVFCFNVVDKEKISNDLFVRHTANKE HDDFTFRSGWYYSGEGSKQMLKLSIEKTTAGETQVWNDEHPMVAFSFKELIEILKPYFEVHIFEHDYDKLLPWDTKSGNA LVTCVKI >Mature_246_residues SANALYTDLSGYYDLMCVDIDYQAQSDCVRRLHQIFGNKGKTHLDLGCGTGPHVRHFIDYGYQSNGLDLNKPMLDIAQVR CPEANFSVQNMSNFEVSEPLDLITCFLYSIHYNDGIERLKECIASVHRALKPEGVFCFNVVDKEKISNDLFVRHTANKEH DDFTFRSGWYYSGEGSKQMLKLSIEKTTAGETQVWNDEHPMVAFSFKELIEILKPYFEVHIFEHDYDKLLPWDTKSGNAL VTCVKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28357; Mature: 28226
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANALYTDLSGYYDLMCVDIDYQAQSDCVRRLHQIFGNKGKTHLDLGCGTGPHVRHFID CCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH YGYQSNGLDLNKPMLDIAQVRCPEANFSVQNMSNFEVSEPLDLITCFLYSIHYNDGIERL CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH KECIASVHRALKPEGVFCFNVVDKEKISNDLFVRHTANKEHDDFTFRSGWYYSGEGSKQM HHHHHHHHHHCCCCCEEEEECCCHHHCCCCEEEEECCCCCCCCEEEECCEEECCCCCCEE LKLSIEKTTAGETQVWNDEHPMVAFSFKELIEILKPYFEVHIFEHDYDKLLPWDTKSGNA EEEEEECCCCCCCEEECCCCCEEEECHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCCE LVTCVKI EEEEEEC >Mature Secondary Structure SANALYTDLSGYYDLMCVDIDYQAQSDCVRRLHQIFGNKGKTHLDLGCGTGPHVRHFID CCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH YGYQSNGLDLNKPMLDIAQVRCPEANFSVQNMSNFEVSEPLDLITCFLYSIHYNDGIERL CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH KECIASVHRALKPEGVFCFNVVDKEKISNDLFVRHTANKEHDDFTFRSGWYYSGEGSKQM HHHHHHHHHHCCCCCEEEEECCCHHHCCCCEEEEECCCCCCCCEEEECCEEECCCCCCEE LKLSIEKTTAGETQVWNDEHPMVAFSFKELIEILKPYFEVHIFEHDYDKLLPWDTKSGNA EEEEEECCCCCCCEEECCCCCEEEECHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCCE LVTCVKI EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA