| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is aslA [H]
Identifier: 218709629
GI number: 218709629
Start: 1759810
End: 1761357
Strand: Direct
Name: aslA [H]
Synonym: VS_1639
Alternate gene names: 218709629
Gene position: 1759810-1761357 (Clockwise)
Preceding gene: 218709622
Following gene: 218709632
Centisome position: 53.34
GC content: 46.38
Gene sequence:
>1548_bases TTGACTAAATTAACCAAAACCGTGTTAGCAATGAGCGCACTCAGCGTTGCTCAAGGCGTCGCTGCGGCAGACCAACCGAA CATTCTTGCTATCTGGGCAGATGATCTTGGTTACTACAACACTAGCGCATACAACCGTGGAATGATGGGCTACGAAACGC CGAACATCGATCGTATTGCTAATGAGGGTGCTATTTTTACGGATATGTACGCACAACAATCTTGTACGGCTGGCCGTGCT TCGTTCGTGACGGGTCAACACCCATTCCGTACCGGCCTACTTACTATCGGTATGCCAGGTTCTTCGCATGGTATTCCTGA CTGGGCTCCTACCATTGGTGATGCTCTTAAAGAAGAAGGTTACGCGACGGCACAATTCGGTAAAAATCACTTAGGCGATC AAGACAAACACCTTCCTACAAACCATGGTTTTGATGAGTTCTTTGGTAACCTTTACCACTTAAACGCGGAAGAAGAGCCT GAAACCTACTTTTATCCTAAAGACCCAGAATTCAGAAAGAACTACGGGCCTCGTGGCGTTATTAAAGCAACCTCTGATGG CAAAATCGAAGATACGGGTCCACTGACTCGCGCTCGTATGGAAAACATCGATGAGGACTTTACCGAAGCGGCTATCACGT TCATGGAGAAATCTGTAAAAGAAGATAAGCCGTTCTTTATCTGGTACAACTCGACTCGTATGCACGTTTGGACTCGTCTG AACGAACATTACAGCGGCATTTCTGGTCAAGGCATCTATGCAGATGGTATGGCTCAATTAGACGACAACGTTGGCGCACT ACTAGATACTCTTGAACGCTTAGAGGTTGCTGACAACACTATTGTTATCCTTTCTACTGATAACGGTGCAGAGAAGTTCA CATGGCCTGACGGCGGTACATCTCCTTTCCACGGTGAAAAAGGCACAACTTACGAAGGCGGCATGCGTGTTCCACAAATC GTGAAATGGCCTGGTGTAATCGAACCTGGCTCTGCGGTTAACGCGCTAATGTCTCAAGAAGACTGGTTACCGACACTAGC TGCTGCTGCCGGTAATGACTCTATCGTTGAAGACCTTAAAGAAGGTGTTTCTCTAAATAATACAGATTGGCGTGTTCACT TAGATGGCTCGAACTTTATGCCATATTTTGAAGGAGAGGCTGAAAAGTCACCCCGTGAAACTATCTTCTACTTCTCTGCA AACGGTGACTTCAATGCGCTTCGTTGGAACGATTGGAAAGCAAGCTTCGCTATGATGGAAGGCACAATGCAATCGGCTAT CCGTCAAGCTCCTGCTTGGGCTTCAATTACAAACCTACGTATGGACCCGTTTGAAACCGCAGCGAAAGAATCTGGCATGT ACACTCGTTGGATGGTAGACAACATGTGGTTATTCGTACCAATGTCTCAAGAAGTGATTAAGTTCATGGGCTCTCTAAAC GATTACCCAATGCAACAAGGCCAAGGCTTCAGTGCCGCAGAGATCAATTACAACACGCTAAAAATGCAAAAGCTGATTCA GCAGATGCAAGCACAAAACGCGAAATAG
Upstream 100 bases:
>100_bases TCCTCTAAGTAACTAGAATTCATACCCAGTAGTCCTCTGAGTTAATACAAAATTGGTATTTTCTTTCTAAACAAATAGAA ACTAAAGAAAGGACATTACC
Downstream 100 bases:
>100_bases CGGAGCAAGGGTTAAACAGCGAAGCAACAGCTAGATAACCTGGCTACCGACCATTAAAGATAACTGACTAATTAAAGCCC CATTGGGGCTTTTTTTGTGA
Product: arylsulfatase A
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MTKLTKTVLAMSALSVAQGVAAADQPNILAIWADDLGYYNTSAYNRGMMGYETPNIDRIANEGAIFTDMYAQQSCTAGRA SFVTGQHPFRTGLLTIGMPGSSHGIPDWAPTIGDALKEEGYATAQFGKNHLGDQDKHLPTNHGFDEFFGNLYHLNAEEEP ETYFYPKDPEFRKNYGPRGVIKATSDGKIEDTGPLTRARMENIDEDFTEAAITFMEKSVKEDKPFFIWYNSTRMHVWTRL NEHYSGISGQGIYADGMAQLDDNVGALLDTLERLEVADNTIVILSTDNGAEKFTWPDGGTSPFHGEKGTTYEGGMRVPQI VKWPGVIEPGSAVNALMSQEDWLPTLAAAAGNDSIVEDLKEGVSLNNTDWRVHLDGSNFMPYFEGEAEKSPRETIFYFSA NGDFNALRWNDWKASFAMMEGTMQSAIRQAPAWASITNLRMDPFETAAKESGMYTRWMVDNMWLFVPMSQEVIKFMGSLN DYPMQQGQGFSAAEINYNTLKMQKLIQQMQAQNAK
Sequences:
>Translated_515_residues MTKLTKTVLAMSALSVAQGVAAADQPNILAIWADDLGYYNTSAYNRGMMGYETPNIDRIANEGAIFTDMYAQQSCTAGRA SFVTGQHPFRTGLLTIGMPGSSHGIPDWAPTIGDALKEEGYATAQFGKNHLGDQDKHLPTNHGFDEFFGNLYHLNAEEEP ETYFYPKDPEFRKNYGPRGVIKATSDGKIEDTGPLTRARMENIDEDFTEAAITFMEKSVKEDKPFFIWYNSTRMHVWTRL NEHYSGISGQGIYADGMAQLDDNVGALLDTLERLEVADNTIVILSTDNGAEKFTWPDGGTSPFHGEKGTTYEGGMRVPQI VKWPGVIEPGSAVNALMSQEDWLPTLAAAAGNDSIVEDLKEGVSLNNTDWRVHLDGSNFMPYFEGEAEKSPRETIFYFSA NGDFNALRWNDWKASFAMMEGTMQSAIRQAPAWASITNLRMDPFETAAKESGMYTRWMVDNMWLFVPMSQEVIKFMGSLN DYPMQQGQGFSAAEINYNTLKMQKLIQQMQAQNAK >Mature_514_residues TKLTKTVLAMSALSVAQGVAAADQPNILAIWADDLGYYNTSAYNRGMMGYETPNIDRIANEGAIFTDMYAQQSCTAGRAS FVTGQHPFRTGLLTIGMPGSSHGIPDWAPTIGDALKEEGYATAQFGKNHLGDQDKHLPTNHGFDEFFGNLYHLNAEEEPE TYFYPKDPEFRKNYGPRGVIKATSDGKIEDTGPLTRARMENIDEDFTEAAITFMEKSVKEDKPFFIWYNSTRMHVWTRLN EHYSGISGQGIYADGMAQLDDNVGALLDTLERLEVADNTIVILSTDNGAEKFTWPDGGTSPFHGEKGTTYEGGMRVPQIV KWPGVIEPGSAVNALMSQEDWLPTLAAAAGNDSIVEDLKEGVSLNNTDWRVHLDGSNFMPYFEGEAEKSPRETIFYFSAN GDFNALRWNDWKASFAMMEGTMQSAIRQAPAWASITNLRMDPFETAAKESGMYTRWMVDNMWLFVPMSQEVIKFMGSLND YPMQQGQGFSAAEINYNTLKMQKLIQQMQAQNAK
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI146229331, Length=424, Percent_Identity=33.2547169811321, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI146229329, Length=424, Percent_Identity=33.2547169811321, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI6005990, Length=424, Percent_Identity=33.2547169811321, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI146229324, Length=424, Percent_Identity=33.2547169811321, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI4503899, Length=384, Percent_Identity=32.5520833333333, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI58743319, Length=467, Percent_Identity=29.1220556745182, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI45430057, Length=354, Percent_Identity=29.0960451977401, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI146229327, Length=350, Percent_Identity=31.1428571428571, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI109389362, Length=418, Percent_Identity=28.4688995215311, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI38569407, Length=342, Percent_Identity=29.8245614035088, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI38569405, Length=340, Percent_Identity=29.7058823529412, Blast_Score=116, Evalue=7e-26, Organism=Homo sapiens, GI59797060, Length=410, Percent_Identity=26.0975609756098, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI53831991, Length=228, Percent_Identity=29.3859649122807, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI157266309, Length=146, Percent_Identity=41.0958904109589, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI71852586, Length=153, Percent_Identity=37.9084967320261, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI71852584, Length=153, Percent_Identity=37.9084967320261, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI31742482, Length=251, Percent_Identity=24.7011952191235, Blast_Score=88, Evalue=2e-17, Organism=Escherichia coli, GI1790233, Length=487, Percent_Identity=29.7741273100616, Blast_Score=195, Evalue=7e-51, Organism=Escherichia coli, GI87081924, Length=439, Percent_Identity=23.6902050113895, Blast_Score=92, Evalue=6e-20, Organism=Caenorhabditis elegans, GI115533416, Length=353, Percent_Identity=27.7620396600567, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI115533418, Length=339, Percent_Identity=27.1386430678466, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17559078, Length=278, Percent_Identity=28.4172661870504, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI281366397, Length=402, Percent_Identity=29.1044776119403, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI281366395, Length=402, Percent_Identity=29.1044776119403, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24666163, Length=402, Percent_Identity=29.1044776119403, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24666109, Length=418, Percent_Identity=27.9904306220096, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24666175, Length=408, Percent_Identity=28.921568627451, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI281363223, Length=144, Percent_Identity=31.9444444444444, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 57394; Mature: 57263
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTKTVLAMSALSVAQGVAAADQPNILAIWADDLGYYNTSAYNRGMMGYETPNIDRIA CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHH NEGAIFTDMYAQQSCTAGRASFVTGQHPFRTGLLTIGMPGSSHGIPDWAPTIGDALKEEG CCCCEEEHHHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCC YATAQFGKNHLGDQDKHLPTNHGFDEFFGNLYHLNAEEEPETYFYPKDPEFRKNYGPRGV CEEHHHCHHHCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCEECCCCCCHHHCCCCCCE IKATSDGKIEDTGPLTRARMENIDEDFTEAAITFMEKSVKEDKPFFIWYNSTRMHVWTRL EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEH NEHYSGISGQGIYADGMAQLDDNVGALLDTLERLEVADNTIVILSTDNGAEKFTWPDGGT HHHHCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCC SPFHGEKGTTYEGGMRVPQIVKWPGVIEPGSAVNALMSQEDWLPTLAAAAGNDSIVEDLK CCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCHHHHHHHH EGVSLNNTDWRVHLDGSNFMPYFEGEAEKSPRETIFYFSANGDFNALRWNDWKASFAMME HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHH GTMQSAIRQAPAWASITNLRMDPFETAAKESGMYTRWMVDNMWLFVPMSQEVIKFMGSLN HHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHCCC DYPMQQGQGFSAAEINYNTLKMQKLIQQMQAQNAK CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKLTKTVLAMSALSVAQGVAAADQPNILAIWADDLGYYNTSAYNRGMMGYETPNIDRIA CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHH NEGAIFTDMYAQQSCTAGRASFVTGQHPFRTGLLTIGMPGSSHGIPDWAPTIGDALKEEG CCCCEEEHHHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCC YATAQFGKNHLGDQDKHLPTNHGFDEFFGNLYHLNAEEEPETYFYPKDPEFRKNYGPRGV CEEHHHCHHHCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCEECCCCCCHHHCCCCCCE IKATSDGKIEDTGPLTRARMENIDEDFTEAAITFMEKSVKEDKPFFIWYNSTRMHVWTRL EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEH NEHYSGISGQGIYADGMAQLDDNVGALLDTLERLEVADNTIVILSTDNGAEKFTWPDGGT HHHHCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCC SPFHGEKGTTYEGGMRVPQIVKWPGVIEPGSAVNALMSQEDWLPTLAAAAGNDSIVEDLK CCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCHHHHHHHH EGVSLNNTDWRVHLDGSNFMPYFEGEAEKSPRETIFYFSANGDFNALRWNDWKASFAMME HCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHH GTMQSAIRQAPAWASITNLRMDPFETAAKESGMYTRWMVDNMWLFVPMSQEVIKFMGSLN HHHHHHHHHCCCCHHHHCCCCCHHHHHHHHCCCEEEEEECCEEEEEECHHHHHHHHHCCC DYPMQQGQGFSAAEINYNTLKMQKLIQQMQAQNAK CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]